prot_H-elongata_contig130183.2201.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig130183.2201.1
Unique Nameprot_H-elongata_contig130183.2201.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
BLAST of mRNA_H-elongata_contig130183.2201.1 vs. uniprot
Match: H3AI42_LATCH (Uncharacterized protein n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AI42_LATCH)

HSP 1 Score: 50.4 bits (119), Expect = 4.060e-5
Identity = 32/103 (31.07%), Postives = 54/103 (52.43%), Query Frame = 0
Query:    4 RDGHSEITASGYRVYFSGDCTGVKGKKRQHGVGLAIKKEIVNKASKDDIAIECINARLLKARVSFKSN-FVTFVVAYAPTEEATEGEKANYIAALNSTVSSVP 105
            R+G  +    GY  ++ G        K+ HGVG AIK E++N+ ++  I I   N RL+  R++   N + T +  YAPT +A +  K  + + L+  +S +P
Sbjct:    9 REGQLKEQGGGYTFFWKG--------KQLHGVGFAIKNELINQLNEFPIGI---NERLMTLRLNLVGNRYATIISVYAPTLDADDEIKEEFYSNLDQVLSGIP 100          
BLAST of mRNA_H-elongata_contig130183.2201.1 vs. uniprot
Match: A0A2B4R8K0_STYPI (Uncharacterized protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4R8K0_STYPI)

HSP 1 Score: 50.1 bits (118), Expect = 5.260e-5
Identity = 33/108 (30.56%), Postives = 59/108 (54.63%), Query Frame = 0
Query:    1 ETKRDGHSEIT--ASGYRVYFSGDCTGVKGKKRQHGVGLAIKKEIVNKASKDDIAIECINARLLKARVSFKSNF-VTFVVAYAPTEEATEGEKANYIAALNSTVSSVP 105
            ET+R G  ++T   +GY  ++ G     + ++R HGVG A+KKE++    +  + +   + RL+  R+  KSN   T + AYAPT +    +K  + + L+S ++  P
Sbjct:   72 ETRRAGEGQLTERGAGYTFFWMGK---EENEQRIHGVGFALKKELIRNLEELPVGV---SERLMTLRLKLKSNQQATVISAYAPTLQVEPEDKEIFYSTLDSVLTQTP 173          
BLAST of mRNA_H-elongata_contig130183.2201.1 vs. uniprot
Match: UPI001F145BBF (uncharacterized protein LOC124530903 n=1 Tax=Vanessa cardui TaxID=171605 RepID=UPI001F145BBF)

HSP 1 Score: 50.1 bits (118), Expect = 8.900e-5
Identity = 31/104 (29.81%), Postives = 53/104 (50.96%), Query Frame = 0
Query:    1 ETKRDGHSEITASGYRVYFSGDCTGVKGKKRQHGVGLAIKKEIVNKASKDDIAIEC---INARLLKARVSFKSNFVTFVVAYAPTEEATEGEKANYIAALNSTV 101
            ET+ +    +  + Y  Y+ G  +    + R+HGVG A++ +++N       AIE    ++ R++  R++ KS FVT + AYAPT  +    K  +   L  TV
Sbjct:   40 ETRTEDEGSLRGANYTFYWKGKSSS---ETREHGVGFAVRNQLIN-------AIETPVGVSERIMFLRLNTKSGFVTLISAYAPTLNSKPETKDQFYDQLEETV 133          
BLAST of mRNA_H-elongata_contig130183.2201.1 vs. uniprot
Match: UPI001F13174D (uncharacterized protein LOC124542512 n=7 Tax=Vanessa cardui TaxID=171605 RepID=UPI001F13174D)

HSP 1 Score: 50.1 bits (118), Expect = 8.920e-5
Identity = 31/104 (29.81%), Postives = 53/104 (50.96%), Query Frame = 0
Query:    1 ETKRDGHSEITASGYRVYFSGDCTGVKGKKRQHGVGLAIKKEIVNKASKDDIAIEC---INARLLKARVSFKSNFVTFVVAYAPTEEATEGEKANYIAALNSTV 101
            ET+ +    +  + Y  Y+ G  +    + R+HGVG A++ +++N       AIE    ++ R++  R++ KS FVT + AYAPT  +    K  +   L  TV
Sbjct:   40 ETRTEDEGSLRGANYTFYWKGKSSS---ETREHGVGFAVRNQLIN-------AIETPVGVSERIMFLRLNTKSGFVTLISAYAPTLNSKPETKDQFYDQLEETV 133          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130183.2201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
H3AI42_LATCH4.060e-531.07Uncharacterized protein n=1 Tax=Latimeria chalumna... [more]
A0A2B4R8K0_STYPI5.260e-530.56Uncharacterized protein n=1 Tax=Stylophora pistill... [more]
UPI001F145BBF8.900e-529.81uncharacterized protein LOC124530903 n=1 Tax=Vanes... [more]
UPI001F13174D8.920e-529.81uncharacterized protein LOC124542512 n=7 Tax=Vanes... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..104
e-value: 7.0E-6
score: 27.9
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 10..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig130183contigH-elongata_contig130183:374..688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig130183.2201.1mRNA_H-elongata_contig130183.2201.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig130183 374..688 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig130183.2201.1 ID=prot_H-elongata_contig130183.2201.1|Name=mRNA_H-elongata_contig130183.2201.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
ETKRDGHSEITASGYRVYFSGDCTGVKGKKRQHGVGLAIKKEIVNKASKD
DIAIECINARLLKARVSFKSNFVTFVVAYAPTEEATEGEKANYIAALNST
VSSVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf