prot_H-elongata_contig13018.2200.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13018.2200.1
Unique Nameprot_H-elongata_contig13018.2200.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length808
Homology
BLAST of mRNA_H-elongata_contig13018.2200.1 vs. uniprot
Match: D7G1P7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P7_ECTSI)

HSP 1 Score: 455 bits (1170), Expect = 3.050e-145
Identity = 362/790 (45.82%), Postives = 425/790 (53.80%), Query Frame = 0
Query:   59 VGRRPLSCLRITDQGGDIHESYGDEE-HGPPWGREVGVDSEGITPVQPYQEEHTAGGSRFHELLARSKRE---TPARPRQAAPRRPVPPGGPIDYDQDRQFEEQLIGSPDLPDPPLLNEMPGLRLSPEMDYDGPAEAGSGHPGGSGDRFQRMMQQAQINDQRQSAGMPPR----SAQSISPXXXXXXXXXXXXEEKEMALKAAVERQQKMMSKARGIDLDDPTLEGPELAKKKALSRAQAEATTGGYVPSSSSSDNYLAALKVDSKRKHRELQAKLEGRS--PFSNESTSMQGPEAPALS--PELVEGGLQQVEVSKRGFVPQRRTKALSSIQNSADVYMASLKGIKVELPS-NPYMAEKKKVMAPGQNPTPERIVRPPPKE--KPPAGPTMSYAERLKLAREKKGIDTAT---PPVACVAAP--SHAPAVAAAVVSANSDSRRSGAPTISYAEKLKQAREAKAARVTGSPP---PPRPAGDHSHVHTVRAATASTRL-GQDAFGSSRWEGDDTHTKMMRAMDLLTEHKTAGIFGEERVAELRRALVVTREALRAEMREESGPWRVESTSVTPPVAPPSVPQSPRPASANQGAAALPAPLTS-------------EDRDALRRCSLLLQAHAHSSLTGRDLVALREGLASSLEIVGIQASGKIGT----DGGFSGVAKEPLRDVEVENEAVPSSVGGVLSVGEILSEMGVSKKPEAFEPED-DSSGEKGWIDGNLGEYEKSIGSKALGYLLKHRGGKGYGRGRVKGAEAQAMISTLAEVVEIFQEEMVED 806
            V R  L  L + D G      +G EE  G P G   G DS  + P  PY+EEHT GG+RF ELLAR+  +          A PRR +PP G  DYD D Q+EEQ IGSPD+PDPPL   MPGL L PE+DY G  EA                     ND RQ AGM PR    S Q ++             EEKE A+KAAVERQQKMM+KARGIDLDDPTLEG ELA+KKALSRAQAEA  GGYVPSSS++D+YL +LK DS++K +E QAKL G    P      S   P   A S  P+     L   E  +R   PQ+RT A  SIQN AD YMASLKGIKVEL   NPY+ E            P + VR PP    KPP GP MSYAE++KLA+  K   TAT   P    VAAP  +  PA  A      S    SG+P +SYAEKLKQA+  KAA   G  P   P               A AS RL  QD       +  D+  KM++ MDLLTEHKTAG+ GE+RV+ELR +LV  REALRAE    S                                                      ED   LRRCS LLQAH HS L G+DL AL EGLASSL IV  Q     GT                     ++  VP+  GG+ SVG  LS+MGV+KKP +F PE+ +  G  GW  G+LGE EK+  SKALGYLLKHRGGKGYGRG++ GA+A+AM++ LAEV EI +EEMVE+
Sbjct:    3 VSRDTLPALSMADDGEGA--LFGPEESEGGPAG--PGGDSNPLGPPPPYREEHTPGGTRFKELLARANGQGAPXXXXXXXAKPRRALPPEGAPDYDDDNQWEEQAIGSPDVPDPPLRENMPGLDLGPELDYGGGGEAXXXXXXXXXXXXXXXX--XXXNDDRQEAGMAPRASPRSPQEVA-KRAAAAQAPVSKEEKERAIKAAVERQQKMMAKARGIDLDDPTLEGAELARKKALSRAQAEAQAGGYVPSSSAADDYLNSLKADSQKKQKETQAKLRGEPLPPREGPLLSASPPTETATSDVPDKSAAPLSSGEDYER-VKPQKRTAASWSIQNKADQYMASLKGIKVELADDNPYLKE-------SLVEEPRQPVRRPPXXXXKPPLGPQMSYAEKMKLAKGAKAAGTATAAAPSSNVVAAPVATLPPATEAXXXXXPS----SGSPALSYAEKLKQAQAQKAAAGNGVFPKSVPXXXXXXXXXXXXXXXAPASRRLLEQDMPSGGLVDEGDSQAKMVKLMDLLTEHKTAGLEGEDRVSELRHSLVDAREALRAETYGRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAAILRRCSALLQAHVHSGLAGQDLQALVEGLASSLTIVTAQVV--TGTAXXXXXXXXXXXXXXXXXXXXDDTGVPAYAGGIQSVGGALSDMGVAKKPASFLPEEGEGDGSAGWTGGSLGEEEKAAASKALGYLLKHRGGKGYGRGKMTGAQAEAMVAALAEVTEIMEEEMVEE 771          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13018.2200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1P7_ECTSI3.050e-14545.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..807
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.814
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13018contigH-elongata_contig13018:1441..6120 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13018.2200.1mRNA_H-elongata_contig13018.2200.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13018 1416..6330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13018.2200.1 ID=prot_H-elongata_contig13018.2200.1|Name=mRNA_H-elongata_contig13018.2200.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=808bp
MTHKHRWVSIFLIIFQAWLAPCHGFASLPYCLERSRAAHHAARHGPFAPA
PWLRAPRDVGRRPLSCLRITDQGGDIHESYGDEEHGPPWGREVGVDSEGI
TPVQPYQEEHTAGGSRFHELLARSKRETPARPRQAAPRRPVPPGGPIDYD
QDRQFEEQLIGSPDLPDPPLLNEMPGLRLSPEMDYDGPAEAGSGHPGGSG
DRFQRMMQQAQINDQRQSAGMPPRSAQSISPPPPGARPPPLNKEEKEMAL
KAAVERQQKMMSKARGIDLDDPTLEGPELAKKKALSRAQAEATTGGYVPS
SSSSDNYLAALKVDSKRKHRELQAKLEGRSPFSNESTSMQGPEAPALSPE
LVEGGLQQVEVSKRGFVPQRRTKALSSIQNSADVYMASLKGIKVELPSNP
YMAEKKKVMAPGQNPTPERIVRPPPKEKPPAGPTMSYAERLKLAREKKGI
DTATPPVACVAAPSHAPAVAAAVVSANSDSRRSGAPTISYAEKLKQAREA
KAARVTGSPPPPRPAGDHSHVHTVRAATASTRLGQDAFGSSRWEGDDTHT
KMMRAMDLLTEHKTAGIFGEERVAELRRALVVTREALRAEMREESGPWRV
ESTSVTPPVAPPSVPQSPRPASANQGAAALPAPLTSEDRDALRRCSLLLQ
AHAHSSLTGRDLVALREGLASSLEIVGIQASGKIGTDGGFSGVAKEPLRD
VEVENEAVPSSVGGVLSVGEILSEMGVSKKPEAFEPEDDSSGEKGWIDGN
LGEYEKSIGSKALGYLLKHRGGKGYGRGRVKGAEAQAMISTLAEVVEIFQ
EEMVEDL*
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