prot_H-elongata_contig13000.2189.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13000.2189.1
Unique Nameprot_H-elongata_contig13000.2189.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length292
Homology
BLAST of mRNA_H-elongata_contig13000.2189.1 vs. uniprot
Match: D7FKF6_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF6_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 4.560e-69
Identity = 177/350 (50.57%), Postives = 215/350 (61.43%), Query Frame = 0
Query:    1 RCRLYDEHGIIIETSTHLEDIMMSDHFHIEDRCVVQPVRDGAIRVNVEVEIKFLKSTMFRKTIETKSLSESREVWEAFFRMTKEAIRIRQPAFPL-PVSSGGNESDDEDRVRATRERLXXXXXXXXXXVQPPHHXXXXXXXXXXXXXSAAATKAHTV--RPRAKSASSRIPLGLPVEDRPDGPE-----KKVRAGI----HHGGS-----------------------------------------ATQASVSSAWSRVFSFAALPWVLLAILFLIEGVQVLRFSWETAGFLEAAETALAVMGA----DGEGNEG-----NNVREAVLREELARGLLKIYSRNRFVWPFS 288
            RCRLYDEHG+I+ETSTHLEDI+MSD+F I+DRCVVQP +DGA+RV+VE+EIKF KSTMFRKTIETKSLSE+R+VWE+F  MTK+AIR R+PA P+  V+SGG+ESDDEDR+RATRE  XXXXXXXXXX      XXXXXXXXXXXXX         V  RPRAKSA++  P    V  R    +     K+  +G+      G S                                              V S  + +FSFAA+PW+LLA++ + E +   RFS ETAGFLEAAE AL V+G     DG+G  G            L  ELARGL++IY R+RF+WPFS
Sbjct:  419 RCRLYDEHGLILETSTHLEDIVMSDYFQIDDRCVVQPGQDGAVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVWESFIGMTKDAIRKRKPAMPVRTVTSGGDESDDEDRIRATREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGVESRPRAKSATAAAPTMAAVPPRAPAQDAAPLRKRGYSGVGFDRKRGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVAAMDTAEYVVVPPVESLSNWLFSFAAVPWLLLALVLVAEVIAYSRFSSETAGFLEAAEAALVVLGGSRAEDGDGGGGVVGNRTAASRTALTAELARGLMRIYCRHRFLWPFS 768          
BLAST of mRNA_H-elongata_contig13000.2189.1 vs. uniprot
Match: A0A6H5L0Q2_9PHAE (VASt domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q2_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 1.140e-58
Identity = 159/308 (51.62%), Postives = 196/308 (63.64%), Query Frame = 0
Query:    1 RCRLYDEHGIIIETSTHLEDIMMSDHFHIEDRCVVQPVRDGAIRVNVEVEIKFLKSTMFRKTIETKSLSESREVWEAFFRMTKEAIRIRQPAFPL-PVSSGGNESDDEDRVRATRERLXXXXXXXXXXVQPPHHXXXXXXXXXXXXXSAAATKAHTV--RPRAKS---------ASSRIPLGLPVED---------------RPDG------PEKK----------------VRAGIHHGGSATQASVSSAWSRVFSFAALPWVLLAILFLIEGVQVLRFSWETAGFLEAAETALAVMGA----DGEG 255
            RCRLYDEHG+I+ETSTHLEDI+MSD+F I+DRCVVQP +DGA+RV+VE+EIKF KSTMFRKTIETKSLSE+R+VWE+F  MTK+A+R R+PA P+   +SGG+ESDDEDR+RATRERLXXXXXXXXXX      X XXXXXXXXXXX         V  RPR+KS         +++ +P     +D               R  G      PE+K                +   +   G      V S  + +FSFAA+PWVLLA++ + E +   RFS ETAGFLEAAE AL V+G     DG+G
Sbjct:  528 RCRLYDEHGLILETSTHLEDILMSDYFQIDDRCVVQPGQDGAVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVWESFIGMTKDALRKRKPAMPVRTTTSGGDESDDEDRIRATRERLXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXEVGSRPRSKSXXXXXXXXPSTAAVPPRAQAQDAAPLRKRGYSGVGFDRKRGSSGGALPERKRGGSXXXXXXXXEGRKLVGAMDTAGYVVVPPVDSLSNWLFSFAAVPWVLLALVLVAEVIAYSRFSSETAGFLEAAEAALVVLGGSRAEDGDG 835          
BLAST of mRNA_H-elongata_contig13000.2189.1 vs. uniprot
Match: W2MLG7_PHYPR (VASt domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2MLG7_PHYPR)

HSP 1 Score: 74.7 bits (182), Expect = 2.490e-11
Identity = 43/120 (35.83%), Postives = 71/120 (59.17%), Query Frame = 0
Query:    1 RCRLYDEHGI-IIETSTHLEDIMMSDHFHIEDRCVVQP--VRDGAIRVNVEVEIKFLKSTMFRKTIETKSLSESREVWEAFFRMTKEAIRIR---QPAFPLPVSSGGNESDDEDRVRATR 114
            +C   ++HG+ ++E+ST L DI   D+F +EDR  + P      A +V +E+++ F KST ++KTIET+++S++R  WE + RM KE +  R   + A   P +S  +    +D VR  R
Sbjct:  460 QCLKENDHGVRVVESSTRLVDIPYGDYFSVEDRWTIVPRSSNPNACKVFIELKVVFGKSTFWKKTIETRAISDNRAKWEKWVRMAKEFLDTRGVNEEAPESPPTSSSSSEIVQDAVRKDR 579          
BLAST of mRNA_H-elongata_contig13000.2189.1 vs. uniprot
Match: A0A329SKC0_9STRA (VASt domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SKC0_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.450e-10
Identity = 44/125 (35.20%), Postives = 70/125 (56.00%), Query Frame = 0
Query:    1 RCRLYDEHGI-IIETSTHLEDIMMSDHFHIEDRCVVQP--VRDGAIRVNVEVEIKFLKSTMFRKTIETKSLSESREVWEAFFRMTKEAIRIRQ--------PAFPLPVSSGGNESDDEDRVRATR 114
            +C   ++HG+ ++E+ST L DI   D+F +EDR  + P      A +V +E+++ F KST ++KTIET+++S++R  WE +  M KE +  R         P  P P SS  +E    D +R  R
Sbjct:  441 QCLKENDHGVRVVESSTRLVDIPYGDYFSVEDRWTIVPRSSNPNACKVFIELKVVFGKSTFWKKTIETRAISDNRTKWEKWVGMAKEFLDTRDINEAANCVPESP-PTSSTSSEKAVHDAIRKDR 564          
BLAST of mRNA_H-elongata_contig13000.2189.1 vs. uniprot
Match: A0A833S7N6_PHYIN (VAD1-like StAR-related lipid transfer domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S7N6_PHYIN)

HSP 1 Score: 70.1 bits (170), Expect = 8.480e-10
Identity = 45/132 (34.09%), Postives = 71/132 (53.79%), Query Frame = 0
Query:    1 RCRLYDEHGI-IIETSTHLEDIMMSDHFHIEDRCVVQPVRD--GAIRVNVEVEIKFLKSTMFRKTIETKSLSESREVWEAFFRMTKEAIRIRQ-------PAFPLPVSSGGNESDD------EDRVRATRER 116
            +C   +EHG+ ++E+ST L DI   D+F +EDR  + P      A +V +E+++ F KST ++KTIET+++S++R  WE +  M KE +  R         +   P SS  +E         +DR   TR R
Sbjct:  428 QCLKENEHGVRVVESSTRLVDIPYGDYFSVEDRWTIVPRSSDPNACKVFIELKVVFGKSTFWKKTIETRAISDNRAKWEKWVSMAKEFLDTRDLHEAANCASESAPTSSSSSEKATVHGAMRKDRGPTTRHR 559          
BLAST of mRNA_H-elongata_contig13000.2189.1 vs. uniprot
Match: W7TNL4_9STRA (VASt domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNL4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 7.910e-9
Identity = 32/98 (32.65%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 RCRLYDEHGIIIETSTHLEDIMMSDHFHIEDRCVVQPV---------RDGAIRVNVEVEIKFLKSTMFRKTIETKSLSESREVWEAFFRMTKEAIRIR 89
            R R++ +HG+++ETS+ +E++   D F +EDR VV+P+           GA+ +    E++F+KST+F+K IE++S +++ E    +F M ++ +  R
Sbjct:   89 RVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGALSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARR 186          
BLAST of mRNA_H-elongata_contig13000.2189.1 vs. uniprot
Match: A0A7S2SSK1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSK1_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.950e-8
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    2 CRLYDEHGIIIETSTHLEDIMMSDHFHIEDRCVVQPVR--DGAIRVNVEV--EIKFLKSTMFRKTIETKSLSESREVWEAFFRMTKEAI 86
            C+++   GI++ET THLEDI   D F++EDR VV P +  DG     +EV  EIK++K T  + TIE+K+ S+  E    FF +  EA+
Sbjct:   55 CQVFVRKGIVVETVTHLEDIPFGDCFNVEDRWVVTPTQLADGTAGTRLEVVFEIKWMKGTWLKGTIESKTKSDMTE----FFTLCTEAM 139          
BLAST of mRNA_H-elongata_contig13000.2189.1 vs. uniprot
Match: A0A4D9D7Z9_9STRA (VASt domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7Z9_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.560e-8
Identity = 31/97 (31.96%), Postives = 61/97 (62.89%), Query Frame = 0
Query:    1 RCRLYDEHGIIIETSTHLEDIMMSDHFHIEDRCVVQPV--------RDGAIRVNVEVEIKFLKSTMFRKTIETKSLSESREVWEAFFRMTKEAIRIR 89
            R R++ +HG+++ETS+ +E++   D F +EDR VV+P+         + A+ +    E++F+KST+F+K IE++S +++ E    +F M ++ +  R
Sbjct:  920 RVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAALSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARR 1016          
BLAST of mRNA_H-elongata_contig13000.2189.1 vs. uniprot
Match: A0A7S2STC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STC3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 6.310e-8
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    2 CRLYDEHGIIIETSTHLEDIMMSDHFHIEDRCVVQPVR--DGAIRVNVEV--EIKFLKSTMFRKTIETKSLSESREVWEAFFRMTKEAI 86
            C+++   GI++ET THLEDI   D F++EDR VV P +  DG     +EV  EIK++K T  + TIE+K+ S+  E    FF +  EA+
Sbjct:  335 CQVFVRKGIVVETVTHLEDIPFGDCFNVEDRWVVTPTQLADGTAGTRLEVVFEIKWMKGTWLKGTIESKTKSDMTE----FFTLCTEAM 419          
BLAST of mRNA_H-elongata_contig13000.2189.1 vs. uniprot
Match: A0A1Z5J9L7_FISSO (VASt domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9L7_FISSO)

HSP 1 Score: 62.8 bits (151), Expect = 2.110e-7
Identity = 29/70 (41.43%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    1 RCRLYDEHGIIIETSTHLEDIMMSDHFHIEDRCVVQPVRDGAIRVNVEVEIKFLKSTMFRKTIETKSLSE 70
            +C  Y  +G++IET T + D+ M+D F++ DR +V+P  D  I++N+E +I F+KSTMF+  I   + SE
Sbjct:  409 KCMRYGNYGMMIETKTIVRDVPMADCFYVTDRLMVKPDGDEKIKLNMEFDITFIKSTMFKGIISKTTTSE 478          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13000.2189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FKF6_ECTSI4.560e-6950.57VASt domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L0Q2_9PHAE1.140e-5851.62VASt domain-containing protein (Fragment) n=1 Tax=... [more]
W2MLG7_PHYPR2.490e-1135.83VASt domain-containing protein n=17 Tax=Phytophtho... [more]
A0A329SKC0_9STRA1.450e-1035.20VASt domain-containing protein n=1 Tax=Phytophthor... [more]
A0A833S7N6_PHYIN8.480e-1034.09VAD1-like StAR-related lipid transfer domain-conta... [more]
W7TNL4_9STRA7.910e-932.65VASt domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S2SSK1_9STRA1.950e-842.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D7Z9_9STRA2.560e-831.96VASt domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S2STC3_9STRA6.310e-842.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5J9L7_FISSO2.110e-741.43VASt domain-containing protein n=2 Tax=Fistulifera... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availablePANTHERPTHR47666FAMILY NOT NAMEDcoord: 2..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..223
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..201
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 224..291
NoneNo IPR availableTMHMMTMhelixcoord: 206..228
IPR031968VASt domainPFAMPF16016VAStcoord: 4..69
e-value: 2.0E-8
score: 34.8
IPR031968VASt domainPROSITEPS51778VASTcoord: 1..90
score: 17.669

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13000contigH-elongata_contig13000:566..1953 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13000.2189.1mRNA_H-elongata_contig13000.2189.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13000 566..1953 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13000.2189.1 ID=prot_H-elongata_contig13000.2189.1|Name=mRNA_H-elongata_contig13000.2189.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=292bp
RCRLYDEHGIIIETSTHLEDIMMSDHFHIEDRCVVQPVRDGAIRVNVEVE
IKFLKSTMFRKTIETKSLSESREVWEAFFRMTKEAIRIRQPAFPLPVSSG
GNESDDEDRVRATRERLRERRKRHRNRVQPPHHPHHARDHAADAPSSAAA
TKAHTVRPRAKSASSRIPLGLPVEDRPDGPEKKVRAGIHHGGSATQASVS
SAWSRVFSFAALPWVLLAILFLIEGVQVLRFSWETAGFLEAAETALAVMG
ADGEGNEGNNVREAVLREELARGLLKIYSRNRFVWPFSTLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031968VASt