prot_H-elongata_contig129987.2186.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig129987.2186.1
Unique Nameprot_H-elongata_contig129987.2186.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig129987.2186.1 vs. uniprot
Match: A0A6H5KZJ1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ1_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 7.040e-9
Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 AGFVARIDDTRLPKCVMFREIMGGAGRVEGQEKEWMGCLLEDLKAFGINADQWTIAAQDEGE 62
            AGFV R++D RLPKC++ R + GG G   GQE +W+  L EDL AF +  ++ +   Q+  +
Sbjct:  305 AGFVMRMEDNRLPKCMLLRAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKESGKKQESAK 366          
BLAST of mRNA_H-elongata_contig129987.2186.1 vs. uniprot
Match: A0A6H5LG55_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG55_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 8.620e-8
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 AGFVARIDDTRLPKCVMFREIMGGAGRVEGQEKEWMGCLLEDLKAFGIN----ADQWTIAAQD 59
            AGFV R++D+RLPK ++   + GG G   GQE +W+  L EDL AF +      D+W  +A+D
Sbjct:  316 AGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFSMGDEMEGDKWKESAKD 378          
BLAST of mRNA_H-elongata_contig129987.2186.1 vs. uniprot
Match: A0A6H5L2N2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2N2_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.180e-7
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 AGFVARIDDTRLPKCVMFREIMGGAGRVEGQEKEWMGCLLEDLKAFGINADQ----WTIAAQD 59
            AGFV R++D+RLPKC+    + GG G   GQE +W+  L EDL AF +  ++    W  +A++
Sbjct:  315 AGFVMRMEDSRLPKCMPLEAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKN 377          
BLAST of mRNA_H-elongata_contig129987.2186.1 vs. uniprot
Match: A0A6H5KDV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV9_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 1.370e-7
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 AGFVARIDDTRLPKCVMFREIMGGAGRVEGQEKEWMGCLLEDLKAFGINAD----QWTIAAQD 59
            AGFV R++D+RLPK ++   + GG G   GQE +W+  L EDL AF +  +    QW  +A+D
Sbjct:  143 AGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGAQWKESAKD 205          
BLAST of mRNA_H-elongata_contig129987.2186.1 vs. uniprot
Match: A0A6H5JII6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII6_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 3.010e-7
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 AGFVARIDDTRLPKCVMFREIMGGAGRVEGQEKEWMGCLLEDLKAFGINADQ----WTIAAQD 59
            AGFV R++D+RLPK ++   + GG G   GQE +W+  L EDL AF +  ++    W  +A+D
Sbjct:  377 AGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKASAKD 439          
BLAST of mRNA_H-elongata_contig129987.2186.1 vs. uniprot
Match: A0A6H5KGF6_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF6_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 3.980e-7
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 AGFVARIDDTRLPKCVMFREIMGGAGRVEGQEKEWMGCLLEDLKAFGINADQ----WTIAAQD 59
            AGFV R++D+RLPK ++   + GG G   GQE +W+  L EDL AF +  ++    W  +A+D
Sbjct:   92 AGFVMRMEDSRLPKHMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKD 154          
BLAST of mRNA_H-elongata_contig129987.2186.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 4.190e-7
Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    1 AGFVARIDDTRLPKCVMFREIMGGAGRVEGQEKEWMGCLLEDLKAFGINADQ----WTIAAQD 59
            AGFV R++D+RLPK ++   + GG G   GQE +W+  L EDL AF ++ ++    W  +A+D
Sbjct:  710 AGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMSDEKEGGKWKESAKD 772          
BLAST of mRNA_H-elongata_contig129987.2186.1 vs. uniprot
Match: A0A6H5K0C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C0_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 5.430e-7
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 AGFVARIDDTRLPKCVMFREIMGGAGRVEGQEKEWMGCLLEDLKAFGINADQ----WTIAAQD 59
            AGFV R++D+RLPK ++   + GG G   GQE +W+  L EDL AF +  ++    W  +A+D
Sbjct:  240 AGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKD 302          
BLAST of mRNA_H-elongata_contig129987.2186.1 vs. uniprot
Match: A0A6H5LDM1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDM1_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 5.640e-7
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 AGFVARIDDTRLPKCVMFREIMGGAGRVEGQEKEWMGCLLEDLKAFGINADQ----WTIAAQD 59
            AGFV R++D+RLPK ++   + GG G   GQE +W+  L EDL AF +  ++    W  +A+D
Sbjct:  395 AGFVLRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKD 457          
BLAST of mRNA_H-elongata_contig129987.2186.1 vs. uniprot
Match: A0A6H5K4Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Q4_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 5.680e-7
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 AGFVARIDDTRLPKCVMFREIMGGAGRVEGQEKEWMGCLLEDLKAFGINADQ----WTIAAQD 59
            AGFV R++D+RLPK ++   + GG G   GQE +W+  L EDL AF +  ++    W  +A+D
Sbjct:  377 AGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKD 439          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig129987.2186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZJ1_9PHAE7.040e-941.94Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LG55_9PHAE8.620e-842.86Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L2N2_9PHAE1.180e-741.27Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDV9_9PHAE1.370e-742.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JII6_9PHAE3.010e-741.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGF6_9PHAE3.980e-741.27Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGX2_9PHAE4.190e-741.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0C0_9PHAE5.430e-741.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LDM1_9PHAE5.640e-741.27Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K4Q4_9PHAE5.680e-741.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig129987contigH-elongata_contig129987:1664..1852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig129987.2186.1mRNA_H-elongata_contig129987.2186.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig129987 1664..1852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig129987.2186.1 ID=prot_H-elongata_contig129987.2186.1|Name=mRNA_H-elongata_contig129987.2186.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
AGFVARIDDTRLPKCVMFREIMGGAGRVEGQEKEWMGCLLEDLKAFGINA
DQWTIAAQDEGE*
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