prot_H-elongata_contig129919.2182.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig129919.2182.1
Unique Nameprot_H-elongata_contig129919.2182.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length110
Homology
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BLAST of mRNA_H-elongata_contig129919.2182.1 vs. uniprot
Match: A0A6H5K4Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Y3_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.460e-12
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 0 
Query:   19 TWLGRLVHHIDSSLSQHERNSCVVLGGSFAKFSPNPEMRSAPLHTNNHRPAEASPHEHLWGIDHRACDPRATSHATWSGQSLLGLALE 106
            T  GR V + + +L + ER + +VL GS+AKFS NPEMR   L + +   AEASP + +WGI HRA  P A   + W G +LLG+AL+
Sbjct:  137 TQYGRAVRNSNQTLWEQEREN-IVLTGSYAKFSQNPEMRLHLLGSGDKLLAEASPWDLIWGIGHRADHPDACRPSRWRGLNLLGIALQ 223
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BLAST of mRNA_H-elongata_contig129919.2182.1 vs. uniprot
Match: UPI001AE579AA (NADAR family protein n=1 Tax=Azospirillum rugosum TaxID=416170 RepID=UPI001AE579AA)

HSP 1 Score: 59.7 bits (143), Expect = 8.100e-9
Identity = 37/92 (40.22%), Postives = 52/92 (56.52%), Query Frame = 0 
Query:   11 PTTLKNKTTWLGRLVHHIDSSLSQHERNSCVVLGGSFAKFSPNPEMRSAPLHTNNHRPAEASPHEHLWGIDHRACDPRATSHATWSGQSLLG 102
            P  ++ K+  LGR V      + +  R++ VV G S AK+S NP++ +  L T N R  +ASP + +WGI   A DPRA   A W G +LLG
Sbjct:   60 PEPVRQKS--LGRRVRGFAEPVWEGARHAIVVTG-SLAKYSQNPDLLAILLATGNTRLVQASPIDRVWGIGLAADDPRAADPAQWRGLNLLG 148
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig129919.2182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K4Y3_9PHAE1.460e-1246.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001AE579AA8.100e-940.22NADAR family protein n=1 Tax=Azospirillum rugosum ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012816NADARPFAMPF08719DUF1768coord: 21..106
e-value: 7.3E-10
score: 39.3
IPR037238YbiA-like superfamilySUPERFAMILY143990YbiA-likecoord: 21..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig129919contigH-elongata_contig129919:1168..1497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig129919.2182.1mRNA_H-elongata_contig129919.2182.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig129919 943..1764 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig129919.2182.1 ID=prot_H-elongata_contig129919.2182.1|Name=mRNA_H-elongata_contig129919.2182.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
MLVSFPSSWSPTTLKNKTTWLGRLVHHIDSSLSQHERNSCVVLGGSFAKF
SPNPEMRSAPLHTNNHRPAEASPHEHLWGIDHRACDPRATSHATWSGQSL
LGLALELAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012816NADAR
IPR037238YbiA-like_sf