prot_H-elongata_contig12980.2174.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12980.2174.1
Unique Nameprot_H-elongata_contig12980.2174.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length189
Homology
BLAST of mRNA_H-elongata_contig12980.2174.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 7.890e-31
Identity = 82/206 (39.81%), Postives = 111/206 (53.88%), Query Frame = 0
Query:    1 LFIDLSGPFHETSLGGNRY-------VTRFKMIRFLKHKSDATNASRNIMNDYFAP--ESLKIDVIRTDGGGEWHG-QFLPFRSKLGIKRESTPQYTPQYNGVVERALGLLRHKTVS-------LLRGVMEGKSDRLWAEAMVYACDMWNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYLRRSKPGHKLAPRGVSCIMLG 189
            +F+DL G     S+GG  Y        TR   + FLKHKSDA  A R+ +    A    SL ++++R+D GGE+ G +F    ++L IK+E TP Y+PQYNGV ER LGL+    ++       L   V   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P+G SC  +G
Sbjct:  727 VFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSL-VEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVG 929          
BLAST of mRNA_H-elongata_contig12980.2174.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 7.940e-31
Identity = 82/206 (39.81%), Postives = 111/206 (53.88%), Query Frame = 0
Query:    1 LFIDLSGPFHETSLGGNRY-------VTRFKMIRFLKHKSDATNASRNIMNDYFAP--ESLKIDVIRTDGGGEWHG-QFLPFRSKLGIKRESTPQYTPQYNGVVERALGLLRHKTVS-------LLRGVMEGKSDRLWAEAMVYACDMWNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYLRRSKPGHKLAPRGVSCIMLG 189
            +F+DL G     S+GG  Y        TR   + FLKHKSDA  A R+ +    A    SL ++++R+D GGE+ G +F    ++L IK+E TP Y+PQYNGV ER LGL+    ++       L   V   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P+G SC  +G
Sbjct:  434 VFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSL-VEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVG 636          
BLAST of mRNA_H-elongata_contig12980.2174.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 3.750e-30
Identity = 77/205 (37.56%), Postives = 107/205 (52.20%), Query Frame = 0
Query:    1 LFIDLSGPFHETSLGGNRY-------VTRFKMIRFLKHKSDATNASRNIMNDYFAPESLK-IDVIRTDGGGEWHG-QFLPFRSKLGIKRESTPQYTPQYNGVVERALGLLRHKTVS-------LLRGVMEGKSDRLWAEAMVYACDMWNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYLRRSKPGHKLAPRGVSCIMLG 189
            +F DL G     S+GG  Y        TR   + FL++KSDA +A R  +    A      ++++R+D GG++ G  F    ++L IK+E TP Y+PQYNGV ER LGL+    ++       L   V   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P+G SC  +G
Sbjct:   95 VFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQRPS-KLLPKGESCFYVG 297          
BLAST of mRNA_H-elongata_contig12980.2174.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 2.350e-29
Identity = 79/205 (38.54%), Postives = 109/205 (53.17%), Query Frame = 0
Query:    1 LFIDLSGPFHETSLGGNRY-------VTRFKMIRFLKHKSDATNASRNIMNDYFAPESLK-IDVIRTDGGGEWHG-QFLPFRSKLGIKRESTPQYTPQYNGVVERALGLLRHKTVS-------LLRGVMEGKSDRLWAEAMVYACDMWNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYLRRSKPGHKLAPRGVSCIMLG 189
            +F+DL G     S+GG  Y        TR   I FL++KSDA +A R  +    A      ++++R+D GGE+ G +F    ++L IK+E TP Y+PQYNGV ER LGL+    ++       L   V   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P+G SC  +G
Sbjct:  248 VFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 450          
BLAST of mRNA_H-elongata_contig12980.2174.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 6.220e-29
Identity = 78/205 (38.05%), Postives = 108/205 (52.68%), Query Frame = 0
Query:    1 LFIDLSGPFHETSLGGNRY-------VTRFKMIRFLKHKSDATNASRNIMNDYFAPESLK-IDVIRTDGGGEWHG-QFLPFRSKLGIKRESTPQYTPQYNGVVERALGLLRHKTVS-------LLRGVMEGKSDRLWAEAMVYACDMWNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYLRRSKPGHKLAPRGVSCIMLG 189
            +F+DL G     S+GG  Y        TR   + FLK++SDA  A R  +    A      ++++R+D GGE+ G +F    ++L IK+E TP Y+PQYNGV ER LGL+    ++       L   V   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P+G SC  +G
Sbjct:  315 VFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 517          
BLAST of mRNA_H-elongata_contig12980.2174.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 7.720e-29
Identity = 77/205 (37.56%), Postives = 108/205 (52.68%), Query Frame = 0
Query:    1 LFIDLSGPFHETSLGGNRY-------VTRFKMIRFLKHKSDATNASRNIMNDYFAPESLK-IDVIRTDGGGEWHG-QFLPFRSKLGIKRESTPQYTPQYNGVVERALGLLRHKTVS-------LLRGVMEGKSDRLWAEAMVYACDMWNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYLRRSKPGHKLAPRGVSCIMLG 189
            +F+DL G     S+GG  Y        TR   + FL++KSDA +A R  +    A      ++++R+D GGE+ G +F    ++L IK+E TP Y+PQYNGV ER LGL+    ++       L   V   K+D+LWAEAM +AC+  N    S+      PYE+WYG  P      PF    Y R  +P  KL P+G SC  +G
Sbjct:  193 VFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 395          
BLAST of mRNA_H-elongata_contig12980.2174.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 7.720e-29
Identity = 79/206 (38.35%), Postives = 111/206 (53.88%), Query Frame = 0
Query:    1 LFIDLSGPFHETSLGGNRY-------VTRFKMIRFLKHKSDATNASRNIMNDYFAP--ESLKIDVIRTDGGGEWHG-QFLPFRSKLGIKRESTPQYTPQYNGVVERALGLLRHKTVS-------LLRGVMEGKSDRLWAEAMVYACDMWNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYLRRSKPGHKLAPRGVSCIMLG 189
            +F+DL G     S+GG  Y        TR   + FLK KSDA +A R+ +    A    SL ++++R+D GGE+ G +F    ++L IK+E TP Y+PQYNGV ER LGL+    ++       L   V   K+DRLWAEAM +AC+  N    S+     SPYE+W+G   +     PF    Y R  +P  KL P+G +C  +G
Sbjct:  633 VFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSL-VEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEA-SHARPYPFLKPAYCRWQRPS-KLLPKGEACFYVG 835          
BLAST of mRNA_H-elongata_contig12980.2174.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.090e-28
Identity = 80/207 (38.65%), Postives = 112/207 (54.11%), Query Frame = 0
Query:    1 LFIDLSGPFHETSLGGNRY-------VTRFKMIRFLKHKSDATNASRNIMNDYFAP--ESLKIDVIRTDGGGEWHG-QFLPFRSKLGIKRESTPQYTPQYNGVVERALGLLRHKTVS-------LLRGVMEGKSDRLWAEAMVYACDMWNRCTSSSLDSGTSPYELWYGR-RPTFDNIPPFGTVGYLRRSKPGHKLAPRGVSCIMLG 189
            +F+DL G     S+GG  Y        TR   I FL++KSDA +A R+ +    A    SL ++ +R+D GGE+ G +F    ++L IK+E TP ++PQYNGV ER LGL+    ++       L   V   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  RP      PF    Y +  +P  KL P+G SC  +G
Sbjct:  331 VFVDLGGKKAVVSVGGKYYPMIVKDDFTRRAWIYFLRNKSDAASAFRSFLASVRADGIPSL-VETVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY--PFLKPAYCKWQRPS-KLFPKGESCFYVG 533          
BLAST of mRNA_H-elongata_contig12980.2174.1 vs. uniprot
Match: A0A6H5KN22_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN22_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 2.510e-28
Identity = 80/206 (38.83%), Postives = 108/206 (52.43%), Query Frame = 0
Query:    1 LFIDLSGPFHETSLGGNRY-------VTRFKMIRFLKHKSDATNASRNIMNDYFAP--ESLKIDVIRTDGGGE-WHGQFLPFRSKLGIKRESTPQYTPQYNGVVERALGLLRHKTVS-------LLRGVMEGKSDRLWAEAMVYACDMWNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGTVGYLRRSKPGHKLAPRGVSCIMLG 189
            +F+DL G     S+GG  Y        TR   + FLK+KSDA  A R+ +    A    SL ++++R+D GGE + G F    ++L IK+E TP Y+PQYNGV ER LGL+    ++       L   V   K+DRLWAEAM  AC+  N    S      SPYE+W+G   +     PF    Y R  +P  KL PRG +C  +G
Sbjct:   16 VFVDLGGRKDVASVGGKHYPMVVKDDFTRRTWLCFLKNKSDAGRAFRSFLVGVRADGIPSL-VEIVRSDNGGECFGGDFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLSKTDRLWAEAMHLACEAINHTACSPNSDSKSPYEMWHGEA-SHARPYPFLKPAYCRWQRPS-KLLPRGEACCYVG 218          
BLAST of mRNA_H-elongata_contig12980.2174.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 3.780e-28
Identity = 79/207 (38.16%), Postives = 113/207 (54.59%), Query Frame = 0
Query:    1 LFIDLSGPFHETSLGGNRY-------VTRFKMIRFLKHKSDATNASRNIMNDYFAP--ESLKIDVIRTDGGGEWHG-QFLPFRSKLGIKRESTPQYTPQYNGVVERALGLLRHKTVS-------LLRGVMEGKSDRLWAEAMVYACDMWNRCTSSSLDSGTSPYELWYGR-RPTFDNIPPFGTVGYLRRSKPGHKLAPRGVSCIMLG 189
            +F+DL G     S+GG  Y        TR   + FL+ KSDA +A R+ + +  A    SL I+++R+D GGE+ G +F    ++L IK+E TP ++P++NGV ER LGL+    ++       L   V   K+DRLWAEAM +AC+  N    S+     SPYE+WYG  RP      PF    Y +  +P  KL P+G SC  +G
Sbjct:  478 VFVDLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSL-IEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY--PFLKPAYCKWQRPS-KLLPKGESCFYVG 680          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12980.2174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBA7_9PHAE7.890e-3139.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE7.940e-3139.81Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVR5_9PHAE3.750e-3037.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRL9_9PHAE2.350e-2938.54Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JV76_9PHAE6.220e-2938.05Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5L3Y0_9PHAE7.720e-2937.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2M6_9PHAE7.720e-2938.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB16_9PHAE2.090e-2838.65Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KN22_9PHAE2.510e-2838.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K622_9PHAE3.780e-2838.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..165
e-value: 6.5E-19
score: 69.9
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..154
score: 13.367
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 19..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12980contigH-elongata_contig12980:1517..2083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12980.2174.1mRNA_H-elongata_contig12980.2174.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12980 1517..2083 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12980.2174.1 ID=prot_H-elongata_contig12980.2174.1|Name=mRNA_H-elongata_contig12980.2174.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp
LFIDLSGPFHETSLGGNRYVTRFKMIRFLKHKSDATNASRNIMNDYFAPE
SLKIDVIRTDGGGEWHGQFLPFRSKLGIKRESTPQYTPQYNGVVERALGL
LRHKTVSLLRGVMEGKSDRLWAEAMVYACDMWNRCTSSSLDSGTSPYELW
YGRRPTFDNIPPFGTVGYLRRSKPGHKLAPRGVSCIMLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf