prot_H-elongata_contig129775.2173.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig129775.2173.1
Unique Nameprot_H-elongata_contig129775.2173.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
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BLAST of mRNA_H-elongata_contig129775.2173.1 vs. uniprot
Match: D7FK35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK35_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 7.770e-15
Identity = 46/96 (47.92%), Postives = 49/96 (51.04%), Query Frame = 0 
Query:    1 LLRCDPRCLKLDQELRRKFGGARIAGGDRENGAPGGRARKTRRGIMPRGMGNT----------LASGLARKRLAVSVPKDDWPKPPSFVGGGLGMK 86
            LLRCDPRCLKLDQELRRKFGG                                          +++ L  KRL VS PKDDWPKPPSFVGGGLGMK
Sbjct:  153 LLRCDPRCLKLDQELRRKFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSASLMLKRLVVSAPKDDWPKPPSFVGGGLGMK 248
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BLAST of mRNA_H-elongata_contig129775.2173.1 vs. uniprot
Match: A0A6H5LA68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA68_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 2.720e-9
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0 
Query:   49 GMGNTLASGLARKRLAVSVPKDDWPKPPSFVGGGLGMK 86
            G  N++++ L  KRL VS PK+DWPKPPSFVGGGLGMK
Sbjct:    7 GNNNSVSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMK 44
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig129775.2173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK35_ECTSI7.770e-1547.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LA68_9PHAE2.720e-968.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig129775contigH-elongata_contig129775:621..878 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig129775.2173.1mRNA_H-elongata_contig129775.2173.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig129775 621..878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig129775.2173.1 ID=prot_H-elongata_contig129775.2173.1|Name=mRNA_H-elongata_contig129775.2173.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
LLRCDPRCLKLDQELRRKFGGARIAGGDRENGAPGGRARKTRRGIMPRGM
GNTLASGLARKRLAVSVPKDDWPKPPSFVGGGLGMK
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