prot_H-elongata_contig12943.2154.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12943.2154.1
Unique Nameprot_H-elongata_contig12943.2154.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length345
Homology
BLAST of mRNA_H-elongata_contig12943.2154.1 vs. uniprot
Match: D7FGW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW7_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 3.410e-55
Identity = 102/140 (72.86%), Postives = 117/140 (83.57%), Query Frame = 0
Query:    1 MARDNGVIPGESETTDSLVEQYRRHRSEIAKIPTYTDSILKMLKDIRKTVRASTRLQPGSTAFAQFLDEWWSSVVKFLQHSSIVVAEKNAREVMETLKSLKVKQEENKKREINRLLCKLDENADFGP--PARRLSELFTP 138
            MA D+G IPGESE+TDSL+EQY+RHRSEI+KIP Y DSILKMLKDIRKTVRAS++LQPG+ +FAQFL+EWW+SVV+FLQ SSIV AEKNAREVM+TLK LK KQEE KKREI+RLL KLD+NA      P   LSE   P
Sbjct:  143 MATDDGAIPGESESTDSLMEQYKRHRSEISKIPMYADSILKMLKDIRKTVRASSKLQPGTNSFAQFLEEWWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDNASIDQHLPVGYLSEELPP 282          
BLAST of mRNA_H-elongata_contig12943.2154.1 vs. uniprot
Match: A0A6H5JCK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK0_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 4.460e-48
Identity = 91/134 (67.91%), Postives = 107/134 (79.85%), Query Frame = 0
Query:    1 MARDNGVIPGESETTDSLVEQYRRHRSEIAKIPTYTDSILKMLKDIRKTVRASTRLQPGSTAFAQFLDEWWSSVVKFLQHSSIVVAEKNAREVMETLKSLKVKQEENKKREINRLLCKLDENADFGPPARRLSE 134
            MA DNG IPGESE+TD L++QYRRHR EI+KIP Y DSI+KMLKDIR+TV AS +LQPGS AF QFLDEWW+SVV+FL+ S IV AE+NAREVM+TLK LK KQEE KKRE++RL+ KL+      PP    SE
Sbjct:    1 MANDNGAIPGESESTDGLIDQYRRHRDEISKIPFYADSIMKMLKDIRRTVNASAKLQPGSNAFTQFLDEWWASVVEFLEQSPIVDAERNAREVMQTLKKLKGKQEEFKKREMSRLMNKLEAQDKATPPMTPASE 134          
BLAST of mRNA_H-elongata_contig12943.2154.1 vs. uniprot
Match: D7FGX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX8_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 4.610e-47
Identity = 91/134 (67.91%), Postives = 107/134 (79.85%), Query Frame = 0
Query:    1 MARDNGVIPGESETTDSLVEQYRRHRSEIAKIPTYTDSILKMLKDIRKTVRASTRLQPGSTAFAQFLDEWWSSVVKFLQHSSIVVAEKNAREVMETLKSLKVKQEENKKREINRLLCKLDENADFGPPARRLSE 134
            MA DNG IPGESE+TD L++QYRRHR EI+KIP Y DSI+KMLKDIR+TV AS +LQPGS AF QFLDEWW+SVV+FL+ S IV AE+NAREVM+TLK LK KQEE KKRE++RL+ KL+      PP    SE
Sbjct:  136 MANDNGAIPGESESTDGLIDQYRRHRDEISKIPFYADSIMKMLKDIRRTVNASAKLQPGSNAFTQFLDEWWASVVEFLEQSPIVDAERNAREVMQTLKKLKGKQEEFKKREMSRLMNKLEAQDKATPPMTPASE 269          
BLAST of mRNA_H-elongata_contig12943.2154.1 vs. uniprot
Match: A0A6H5JA20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA20_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 3.040e-45
Identity = 101/175 (57.71%), Postives = 118/175 (67.43%), Query Frame = 0
Query:    1 MARDNGVIPGESETTDSLVEQYRRHRSEIAKIPTYTDSILKMLKDIRKTVRASTRLQPGSTAFAQFLDE--------------------------WWSSVVKFLQHSSIVVAEKNAREVMETLKSLKVKQEENKKREINRLLCKLDENADFGPPARRLSELFTPPRLHQATDGSP 149
            MA D+G IPGESE+TD+L+EQY+RHRSEI+KIP Y D ILKMLKDIRKTVRAS++LQPG  +FAQFL+E                          WW+SVV+FLQ SSIV AEKNAREVM+TLK LK KQEE KKREI+RLL KLD+NA      + L   + P  L     GSP
Sbjct:  158 MATDDGAIPGESESTDALIEQYKRHRSEISKIPMYADRILKMLKDIRKTVRASSKLQPGPNSFAQFLEEARPAPMFNRSLFVTLLPKCCSVASRKWWASVVQFLQQSSIVEAEKNAREVMQTLKKLKGKQEEGKKREISRLLSKLDDNASID---QHLPTGYLPEELPPKAAGSP 329          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12943.2154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FGW7_ECTSI3.410e-5572.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCK0_9PHAE4.460e-4867.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGX8_ECTSI4.610e-4767.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA20_9PHAE3.040e-4557.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12943contigH-elongata_contig12943:3743..7237 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12943.2154.1mRNA_H-elongata_contig12943.2154.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12943 3735..7237 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12943.2154.1 ID=prot_H-elongata_contig12943.2154.1|Name=mRNA_H-elongata_contig12943.2154.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=345bp
MARDNGVIPGESETTDSLVEQYRRHRSEIAKIPTYTDSILKMLKDIRKTV
RASTRLQPGSTAFAQFLDEWWSSVVKFLQHSSIVVAEKNAREVMETLKSL
KVKQEENKKREINRLLCKLDENADFGPPARRLSELFTPPRLHQATDGSPL
LEAFDEGASDSSPEPRLRDALAPRENRHHHRYQPPQPQQQQLEFPSCAGA
SANTSPPRLGHASAAASAAAAAAAAAAVATATAASRAKSGRSWQQHQLGV
GIDDGGISEGLERRTAATSSASVCTTMTTSRTNAAFSTRVETGSDSVALV
VTAAAADSAPLAAATATAGGLSLVPRSLPPALALRPRGSFVSLGG
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