prot_H-elongata_contig129407.2153.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig129407.2153.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 6.460e-19 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query: 1 MSAVFASKRSDATTIIGDSGASRHTFCDGTHVRNKRSPGPGEAYLVIGDGTQIPVKCYGDLDMVLRCEKDGKPWSNVEVTLKNIAVVPNLWFDLISFNQI 100
+S++F +R +T IGDS ++ H DGTHV N R P E +L IGDG ++ +C+G LD+V C +D V VT+K+IAVVP+L FDL+S N I
Sbjct: 2 LSSIFPRRRPGSTVWIGDSASTVHATSDGTHVYNTRPPLAEETFLFIGDGRKLKAECFGSLDVVFHCRED------VLVTMKDIAVVPDLAFDLVSLNVI 95
BLAST of mRNA_H-elongata_contig129407.2153.1 vs. uniprot
Match: A0A6H5LQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQP2_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 7.270e-10 Identity = 38/103 (36.89%), Postives = 54/103 (52.43%), Query Frame = 0
Query: 9 RSDATTIIGDSGASRHTFCDGTHVRNKRSPGPGEAYLVIGDGTQIPVKCYGDLDMVLRCEKDGKPWSNVEVTLKNIAVVPNLWF-----------DLISFNQI 100
R AT +G + A H V N+R P P E L++ DG ++PVK +GDLD+V C++D V VTL ++VVP L DL+SF++I
Sbjct: 8 RPGATVFLGHTSAKIHVARSEDKVDNRRLPRPQEQLLMLSDGRRVPVKLFGDLDVVFHCQRD------VCVTLTGVSVVPGLVLMGVGALPGLALDLLSFSRI 104 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig129407.2153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig129407.2153.1 ID=prot_H-elongata_contig129407.2153.1|Name=mRNA_H-elongata_contig129407.2153.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bpback to top |