prot_H-elongata_contig129373.2150.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig129373.2150.1
Unique Nameprot_H-elongata_contig129373.2150.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length288
Homology
BLAST of mRNA_H-elongata_contig129373.2150.1 vs. uniprot
Match: A0A6H5JIC4_9PHAE (Ribos_L4_asso_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIC4_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 1.920e-156
Identity = 226/287 (78.75%), Postives = 253/287 (88.15%), Query Frame = 0
Query:    1 MCRGGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPTLVMARGHRVEEVPELPLVVDNSLESCTKIQSALAILVALGATAEVEKVKDSKKIRVGKGKMRNRRYVMRRGPLVIYEKSEGIHKAFRNLPGVETVCVDHLNLLTLAPGGHLGRFCIWTKAAFDKLDSIFGIYTDKSKIKTGYQLPRHCMTNTDLNRIINSDEIQSVVRVPKPDEQKRKVARKVNSLRNRDVMMRLNLHHEARLKTQADYQDAQRAVRKAILKERRARKSEGKKFYLKANLEGDVKF 287
            MCRGGRMF+PTKIWRRWHRHVNVNQKRYAVASALAATAVP LVMARGHRVEEVPELPLVVD SLE+C+K  +ALA L ALGA AEVEKVKDSKKIR GKGKMRNRRYVMRRGPLVIY+KSEGI +AFRNLPGVET CVD LNLLTLAPGGH+GRFC+WT+AAFDKLDSI+G YT+KS +K+ +QLPRHCMTNTDLNRIINSDEIQSVV  PKP+ Q R+VARKVN L+NR VM+ LN +H+AR+  Q   Q+A +A RKA+LKERR RK+  + F+ KANLEGDVKF
Sbjct:   93 MCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCSKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVMRRGPLVIYDKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRGVMLSLNPYHDARIAAQQAQQEANKAGRKAVLKERRGRKTARRAFHAKANLEGDVKF 379          
BLAST of mRNA_H-elongata_contig129373.2150.1 vs. uniprot
Match: A0A836CFT4_9STRA (Ribosomal protein L4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT4_9STRA)

HSP 1 Score: 346 bits (887), Expect = 2.740e-115
Identity = 181/298 (60.74%), Postives = 223/298 (74.83%), Query Frame = 0
Query:    1 MCRGGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPTLVMARGHRVEEVPELPLVVDNSLESCTKIQSALAILVALGATAEVEKVKDSKKIRVGKGKMRNRRYVMRRGPLVIYEKSEGIHKAFRNLPGVETVCVDHLNLLTLAPGGHLGRFCIWTKAAFDKLDSIFGIYTDKSKIKTGYQLPRHCMTNTDLNRIINSDEIQSVVRVPKPDEQKRKVARKVNSLRNRDVMMRLNLH-----------HEARLKTQADYQDAQRAVRKAILKERRARKSEGKKFYLKANLEGDVKF 287
            MCRGGRMFAPTKIWRRWHR +NVNQKRYAVASALAA+AVP LVMARGH+V EVPELPLVVDNSL+S  K   A+  L  LGA A+V+K K+SKKIR GKGKMRNRRYV+RRGPLVIY +S+G+ KAFRNL GVET CVD LNLL LAPGGH+GRFC+WT+AAF++LD+++G Y +K   K+GY LPR  MTN D+ RIINS E+QSV+R  +P+ Q+  + RK N+L+N  V+ RL+ +            E R   +A+    +RA  KA    ++A K++G+ FY  AN EG VKF
Sbjct:   94 MCRGGRMFAPTKIWRRWHRRINVNQKRYAVASALAASAVPALVMARGHKVHEVPELPLVVDNSLQSLKKTSDAIKALAKLGAAADVDKAKNSKKIRAGKGKMRNRRYVLRRGPLVIYAESDGLQKAFRNLAGVETACVDRLNLLQLAPGGHMGRFCVWTQAAFERLDAVYGTYAEKGA-KSGYTLPRQQMTNADVARIINSTEVQSVLRAARPEAQRHMLPRKKNALKNLGVLERLSPYAAHARKAATKAQEERKGKRAELLATKRAAAKAQRPAKKALKAQGRAFYEAANQEGSVKF 390          
BLAST of mRNA_H-elongata_contig129373.2150.1 vs. uniprot
Match: A0A7S2UWI4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWI4_9STRA)

HSP 1 Score: 324 bits (830), Expect = 1.380e-106
Identity = 177/298 (59.40%), Postives = 221/298 (74.16%), Query Frame = 0
Query:    1 MCRGGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPTLVMARGHRVEEVPELPLVVDNSLESCTKIQSALAILVALGATAEVEKVKDSKKIRVGKGKMRNRRYVMRRGPLVIYEKSE--GIHKAFRNLPGVETVCVDHLNLLTLAPGGHLGRFCIWTKAAFDKLDSIFGIYTDKSKIKTGYQLPRHCMTNTDLNRIINSDEIQSVVRVPKPDEQKRKVARKVNSLRNRDVMMRLNLHHEARLKTQADYQDAQR--------AVRKAILKER---RARKSEGKKFYLKANLEGDV 285
            MCRGGRMFAPTKIWRRWHR+VNVNQ+RYAVASALAA+A+P LVMARGH+++EVPELPLVVD   ++  K   A  +L  LGA A+++K+K +KK+R GKGK+RNRR+V RRGPLV+Y+ SE   I  A RNLPGVE   VD LNLLTLAPGGH+GRF +WT+AAFDKLD+++G Y  KS +K GY LPRH M N DL+R+INSDEIQSVVR P   + KR V RK N L+N  VM R+N +  A  +++   Q+A++        A R+  LK++   +A K+E K FY KAN EGDV
Sbjct:   98 MCRGGRMFAPTKIWRRWHRNVNVNQRRYAVASALAASALPALVMARGHKIDEVPELPLVVDTDAQALKKTAKARKLLETLGAKADLDKIKATKKLRAGKGKLRNRRFVQRRGPLVVYDASEEGSIALAVRNLPGVECARVDSLNLLTLAPGGHMGRFIVWTQAAFDKLDALYGTYDAKSSMKKGYSLPRHVMANADLSRLINSDEIQSVVR-PAEAKSKRTVPRKKNPLKNLGVMARINPYAVAARRSEYRAQEARKTAKAEQIAAKRQMALKKKAASKAGKAERKAFYEKANKEGDV 394          
BLAST of mRNA_H-elongata_contig129373.2150.1 vs. uniprot
Match: Q9XFV3_9CHLO (60S ribosomal protein L4 n=1 Tax=Chlamydomonas sp. HS-5 TaxID=108458 RepID=Q9XFV3_9CHLO)

HSP 1 Score: 320 bits (820), Expect = 1.610e-105
Identity = 169/297 (56.90%), Postives = 215/297 (72.39%), Query Frame = 0
Query:    1 MCRGGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPTLVMARGHRVEEVPELPLVVDNSLESCTKIQSALAILVALGATAEVEKVKDSKKIRVGKGKMRNRRYVMRRGPLVIYEKSEGIHKAFRNLPGVETVCVDHLNLLTLAPGGHLGRFCIWTKAAFDKLDSIFGIYTDKSKIKTGYQLPRHCMTNTDLNRIINSDEIQSVVRVPKPDEQKRKVARKVNSLRNRDVMMRLNLHHEARLKTQADYQDAQRAVRKAILKERRARKSEG-----------KKFYLKANLEGDVK 286
            MCRGGRMFAPTK WRRWHR VN+ QKR+AVASALAA+A+P+LVMARGHR+E+VPE+PLV+ +++ES +K   AL IL  +GA  +VEK K SK++R GKGKMRNRRY +R+GPL+++    GI +AFRNL GVE   VDHLNLL LAPGGH+GRFC+WTK+AFDKLDSIFG YT  S++K GY+LPR CMTN+DL R+INSDEIQSVVR  K    K    +K N L+N   M++LN + +A+L+ +    + +   R+  L   RA KS G           KKFY +  ++ D K
Sbjct:   52 MCRGGRMFAPTKTWRRWHRKVNLTQKRHAVASALAASALPSLVMARGHRIEQVPEVPLVLSDAVESVSKTSKALEILKKIGAAPDVEKAKASKQLRRGKGKMRNRRYTLRKGPLIVFANDSGISRAFRNLTGVEVTSVDHLNLLQLAPGGHMGRFCVWTKSAFDKLDSIFGTYTKPSEVKKGYKLPRACMTNSDLTRLINSDEIQSVVRPAKKLTTKHAPLKK-NPLKNLGAMLKLNPYAKAQLRREVLVSEKRAVARQEKLAAMRAGKSVGPKKSAEQKALGKKFYKQMIVDSDYK 347          
BLAST of mRNA_H-elongata_contig129373.2150.1 vs. uniprot
Match: A0A250XAY6_9CHLO (Ribos_L4_asso_C domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XAY6_9CHLO)

HSP 1 Score: 312 bits (800), Expect = 1.210e-101
Identity = 162/274 (59.12%), Postives = 204/274 (74.45%), Query Frame = 0
Query:    1 MCRGGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPTLVMARGHRVEEVPELPLVVDNSLESCTKIQSALAILVALGATAEVEKVKDSKKIRVGKGKMRNRRYVMRRGPLVIYEKSEGIHKAFRNLPGVETVCVDHLNLLTLAPGGHLGRFCIWTKAAFDKLDSIFGIYTDKSKIKTGYQLPRHCMTNTDLNRIINSDEIQSVVRVPKPDEQKRKVARKVNSLRNRDVMMRLNLHHEARLKTQADYQDAQRAVRKAILKERRARKSEGKK 274
            MCRGGRMFAPTK+WR+WHR VN+ QKR+AVASALAA+A+P+LV+ARGHR+E+VPE+PLV+ ++ ES  K   AL +L  +GA  +VEK +DSK +R GKGKMRNRRYV+R+GPLV++ +  GI KAFRNLPGVE   VD LNLL LAPGGH+GRFCIWTK+AF+KLD +FG YT  S +K GY+LPR  M+N+DL RIINSDEIQS VR  K    K K  +K N L+N   M++LN + +A L+ +    + + A R   L   RA KS G K
Sbjct:  115 MCRGGRMFAPTKVWRKWHRKVNLTQKRHAVASALAASALPSLVLARGHRIEQVPEVPLVLSDAAESVKKTSKALEVLKKIGAIPDVEKARDSKNLRRGKGKMRNRRYVLRKGPLVVFGEDSGISKAFRNLPGVEVTSVDRLNLLQLAPGGHVGRFCIWTKSAFEKLDKVFGTYTTASAVKKGYKLPRSIMSNSDLTRIINSDEIQSAVRPQKAAAPKHKPLKK-NPLKNLGAMLKLNPYAKAALRREVVVSEKRAAARAEKLAALRAGKSVGPK 387          
BLAST of mRNA_H-elongata_contig129373.2150.1 vs. uniprot
Match: A0A7S0RBK1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RBK1_9CHLO)

HSP 1 Score: 310 bits (793), Expect = 7.200e-101
Identity = 157/237 (66.24%), Postives = 184/237 (77.64%), Query Frame = 0
Query:    1 MCRGGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPTLVMARGHRVEEVPELPLVVDNSLESCTKIQSALAILVALGATAEVEKVKDSKKIRVGKGKMRNRRYVMRRGPLVIYEKSEGIHKAFRNLPGVETVCVDHLNLLTLAPGGHLGRFCIWTKAAFDKLDSIFGIYTDKSKIKTGYQLPRHCMTNTDLNRIINSDEIQSVVRVPKPDEQKRKVARKVNSLRNRDVMMRLN 237
            MCRGGRMFAPTK+WRRWHR +N+NQKRYAV SALAA+A+P LVMARGHRVE+VPE+PLV+ ++ ES TK   A+ +L  +GA  +VEK KDSK IR GKGKMRNRRY +R+GPLV+Y  + GI KAFRNLPGVE   VD LNLL LAPGGHLGRF IWTKAAF+KLD+IFG  T +S +K GY+LPR  M N DL R+INSDEIQSVVR PK    K     K N L+N   M++LN
Sbjct:   93 MCRGGRMFAPTKVWRRWHRKININQKRYAVVSALAASALPALVMARGHRVEQVPEVPLVLSDAAESITKTSKAVEVLKKIGAYPDVEKSKDSKAIRAGKGKMRNRRYTLRKGPLVVYANNNGIAKAFRNLPGVEVASVDTLNLLQLAPGGHLGRFVIWTKAAFEKLDAIFGTATKESAVKKGYKLPRAIMANADLTRLINSDEIQSVVRAPKAGP-KTHAPLKKNPLKNLGAMLKLN 328          
BLAST of mRNA_H-elongata_contig129373.2150.1 vs. uniprot
Match: A0A699ZVZ8_HAELA (Component of cytosolic 80S ribosome and 60S large subunit n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZVZ8_HAELA)

HSP 1 Score: 306 bits (784), Expect = 8.620e-101
Identity = 155/237 (65.40%), Postives = 185/237 (78.06%), Query Frame = 0
Query:    1 MCRGGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPTLVMARGHRVEEVPELPLVVDNSLESCTKIQSALAILVALGATAEVEKVKDSKKIRVGKGKMRNRRYVMRRGPLVIYEKSEGIHKAFRNLPGVETVCVDHLNLLTLAPGGHLGRFCIWTKAAFDKLDSIFGIYTDKSKIKTGYQLPRHCMTNTDLNRIINSDEIQSVVRVPKPDEQKRKVARKVNSLRNRDVMMRLN 237
            MCRGGRMFAPTK+WRRWHR +N+NQKRYAV SALAA+A+P+LVMARGHRV++VPE+PLV+  + ES TK   A+ +L  +GA A+VEK KDSK IR GKGKMRNRRYV+R+GPLV+Y  + GI KAFRNLPGVE   VD LNLL LAPGGHLGRF IWT+ AF++LD IFG  T  S  K GY+LPR  M N DL R+INSDEIQSVVR P+   +K    +K N L+N  VM++LN
Sbjct:    1 MCRGGRMFAPTKVWRRWHRKININQKRYAVVSALAASALPSLVMARGHRVDQVPEVPLVLSEAAESITKTSKAIEVLKKIGAYADVEKAKDSKAIRAGKGKMRNRRYVLRKGPLVVYANNNGIAKAFRNLPGVEVASVDSLNLLQLAPGGHLGRFVIWTQPAFEQLDKIFGTTTKDSATKKGYKLPRGIMANGDLTRLINSDEIQSVVRAPQARYKKHAPLKK-NPLKNLGVMLKLN 236          
BLAST of mRNA_H-elongata_contig129373.2150.1 vs. uniprot
Match: M4BK82_HYAAE (Ribos_L4_asso_C domain-containing protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=M4BK82_HYAAE)

HSP 1 Score: 306 bits (783), Expect = 2.870e-100
Identity = 159/270 (58.89%), Postives = 201/270 (74.44%), Query Frame = 0
Query:    1 MCRGGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPTLVMARGHRVEEVPELPLVVDNSLESCTKIQSALAILVALGATAEVEKVKDSKKIRVGKGKMRNRRYVMRRGPLVIYEKSEGIHKAFRNLPGVETVCVDHLNLLTLAPGGHLGRFCIWTKAAFDKLDSIFGIYTDKSKIKTGYQLPRHCMTNTDLNRIINSDEIQSVVRVPKPDEQKRKVARKVNSLRNRDVMMRLNLH----HEARLKTQADYQDAQRAVRKAILKERR 266
            MCRGGRMFAPT+IWR+WHR +NVNQ+R+AVASALAA+AVP LVMARGHR+E+VPE+PLV+D+S+E+  K   AL +L  +GA  EVEKVK SKKI  G+GK RNRRY MRRGPL+++  + G  KAFRN+PG+E V VD LNLL LAPGGHLGRF IWTK+AF KLD ++G Y+ KS +KT YQLPRH M N +L R+INSDEIQSVVR     + +R   +K N L+N   M++LN +      A L+      +A RA +KA+  ++R
Sbjct:   52 MCRGGRMFAPTRIWRKWHRKINVNQRRFAVASALAASAVPALVMARGHRIEKVPEVPLVLDDSVETIQKTTQALKVLAKIGADVEVEKVKASKKITTGRGKSRNRRYTMRRGPLIVFANANGAEKAFRNIPGIELVHVDRLNLLQLAPGGHLGRFIIWTKSAFQKLDGLYGTYSKKSTVKTDYQLPRHLMNNANLGRLINSDEIQSVVRAGTYTKHRR--FQKKNPLKNLGAMVKLNPYTLVARRAELRA-----EAMRAEKKAVAGQKR 314          
BLAST of mRNA_H-elongata_contig129373.2150.1 vs. uniprot
Match: A0A7J7Q3B7_9CHLO (Component of cytosolic 80S ribosome and 60S large subunit n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q3B7_9CHLO)

HSP 1 Score: 305 bits (780), Expect = 6.840e-99
Identity = 155/237 (65.40%), Postives = 183/237 (77.22%), Query Frame = 0
Query:    1 MCRGGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPTLVMARGHRVEEVPELPLVVDNSLESCTKIQSALAILVALGATAEVEKVKDSKKIRVGKGKMRNRRYVMRRGPLVIYEKSEGIHKAFRNLPGVETVCVDHLNLLTLAPGGHLGRFCIWTKAAFDKLDSIFGIYTDKSKIKTGYQLPRHCMTNTDLNRIINSDEIQSVVRVPKPDEQKRKVARKVNSLRNRDVMMRLN 237
            MCRGG MFAPTK WRRWHR +N+NQKRYAVASALAA+ +P LVMARGHR+E+V E+PLVV ++ ES TK   AL +L A+GA A+ EK +DSK IR GKGKMRNRRYV+R+GPLV+Y    GI KAFRNLPGVE   VD LNLL LAPGGHLGRF I+TK+AFD+LD IFG  T  S++K GY+LPR CMTN D+ R+INSDE+QSVV  PK    K   A K N L+N   M++LN
Sbjct:   94 MCRGGHMFAPTKTWRRWHRKININQKRYAVASALAASGLPALVMARGHRIEQVAEVPLVVSDAAESITKTSKALELLKAVGADADTEKARDSKAIRRGKGKMRNRRYVLRKGPLVVYGADNGISKAFRNLPGVEVASVDALNLLQLAPGGHLGRFVIFTKSAFDRLDKIFGSTTTASEVKKGYKLPRACMTNADVTRLINSDEVQSVVNAPKESGAKH-YALKKNPLKNLGAMVKLN 329          
BLAST of mRNA_H-elongata_contig129373.2150.1 vs. uniprot
Match: A0A5J4Y2W8_9CHLO (60S ribosomal L4-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y2W8_9CHLO)

HSP 1 Score: 304 bits (779), Expect = 8.820e-99
Identity = 167/294 (56.80%), Postives = 209/294 (71.09%), Query Frame = 0
Query:    1 MCRGGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPTLVMARGHRVEEVPELPLVVDNSLESCTKIQSALAILVALGATAEVEKVKDSKKIRVGKGKMRNRRYVMRRGPLVIYEKSEGIHKAFRNLPGVETVCVDHLNLLTLAPGGHLGRFCIWTKAAFDKLDSIFGIYTDKSKIKTGYQLPRHCMTNTDLNRIINSDEIQSVVRVPKPDEQKRKVARKVNSLRNRDVMMRLN----------LHHEARLKTQADYQDAQRAVRKAILKERRARKSEGKKFYLKANLEGD 284
            MCRGGRMF+PTK+WRRWHR +N+NQKRYAV SALAA+A+P+LVMARGH++E+VPE+PLVVD+S ES TK   A+ IL ++GA  + EK KDSK +R GKGKMRNRRYV R+GPLVIY    GI KAFRNLPGV+T  V  LNL+ LAPGGHLGRF IWTK+AFD+LDSIFG     S+ K GY+LPR  MTN+DL R+INSDE+QSVVR  K  ++ R +  K N L+N   +++LN          L H+AR+ +     +  +A RKA   E    K  G+ FY +   + D
Sbjct:   94 MCRGGRMFSPTKVWRRWHRKININQKRYAVVSALAASALPSLVMARGHKIEKVPEIPLVVDDSSESITKTSKAVQILKSVGAYEDAEKAKDSKNVRRGKGKMRNRRYVNRKGPLVIYGNDNGIAKAFRNLPGVDTAPVTALNLMQLAPGGHLGRFIIWTKSAFDQLDSIFGTVEAASEQKKGYKLPRAPMTNSDLTRLINSDEVQSVVRPKKTVKRGRPL--KKNPLKNLGALLKLNPYAKTARRQELLHQARVASGKGRDEKLQAARKAAKAEH---KQVGQAFYKQMTQDSD 382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig129373.2150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIC4_9PHAE1.920e-15678.75Ribos_L4_asso_C domain-containing protein n=2 Tax=... [more]
A0A836CFT4_9STRA2.740e-11560.74Ribosomal protein L4 domain-containing protein n=1... [more]
A0A7S2UWI4_9STRA1.380e-10659.40Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
Q9XFV3_9CHLO1.610e-10556.9060S ribosomal protein L4 n=1 Tax=Chlamydomonas sp.... [more]
A0A250XAY6_9CHLO1.210e-10159.12Ribos_L4_asso_C domain-containing protein n=1 Tax=... [more]
A0A7S0RBK1_9CHLO7.200e-10166.24Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A699ZVZ8_HAELA8.620e-10165.40Component of cytosolic 80S ribosome and 60S large ... [more]
M4BK82_HYAAE2.870e-10058.89Ribos_L4_asso_C domain-containing protein n=25 Tax... [more]
A0A7J7Q3B7_9CHLO6.840e-9965.40Component of cytosolic 80S ribosome and 60S large ... [more]
A0A5J4Y2W8_9CHLO8.820e-9956.8060S ribosomal L4-like n=1 Tax=Trebouxia sp. A1-2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02575560S ribosomal protein L4, C-terminal domainPFAMPF14374Ribos_L4_asso_Ccoord: 182..253
e-value: 3.2E-22
score: 78.4
IPR023574Ribosomal protein L4 domain superfamilyGENE3D3.40.1370.10coord: 1..210
e-value: 2.3E-93
score: 314.5
IPR023574Ribosomal protein L4 domain superfamilySUPERFAMILY52166Ribosomal protein L4coord: 1..168
IPR002136Ribosomal protein L4/L1ePFAMPF00573Ribosomal_L4coord: 1..167
e-value: 4.8E-23
score: 81.8
NoneNo IPR availablePANTHERPTHR1943160S RIBOSOMAL PROTEIN L4coord: 1..274
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 29..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 40..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..287
IPR013000Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved sitePROSITEPS00939RIBOSOMAL_L1Ecoord: 22..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig129373contigH-elongata_contig129373:638..1501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig129373.2150.1mRNA_H-elongata_contig129373.2150.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig129373 434..1501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig129373.2150.1 ID=prot_H-elongata_contig129373.2150.1|Name=mRNA_H-elongata_contig129373.2150.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=288bp
MCRGGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPTLVMARGHRV
EEVPELPLVVDNSLESCTKIQSALAILVALGATAEVEKVKDSKKIRVGKG
KMRNRRYVMRRGPLVIYEKSEGIHKAFRNLPGVETVCVDHLNLLTLAPGG
HLGRFCIWTKAAFDKLDSIFGIYTDKSKIKTGYQLPRHCMTNTDLNRIIN
SDEIQSVVRVPKPDEQKRKVARKVNSLRNRDVMMRLNLHHEARLKTQADY
QDAQRAVRKAILKERRARKSEGKKFYLKANLEGDVKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025755Ribos_L4_C_dom
IPR023574Ribosomal_L4_dom_sf
IPR002136Ribosomal_L4/L1e
IPR013000Ribosomal_L4/L1e_euk/arc_CS