prot_H-elongata_contig129060.2135.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig129060.2135.1
Unique Nameprot_H-elongata_contig129060.2135.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig129060.2135.1 vs. uniprot
Match: D7FZ64_ECTSI (Long chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ64_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 9.570e-60
Identity = 100/136 (73.53%), Postives = 112/136 (82.35%), Query Frame = 0
Query:    1 DTIRQLATGQTGKIVIRGPQVMDGYHNNPRATAEVMDRDGFFDTGDLGRFNPPTGDLVVTGRAKDTIVLNNGENVEPQPLEARWKDGRRGGGGGDAISGECSFVDQVMLFGQDERFLGAIVCLNPSALGAAGLISQ 136
            +T +Q+A GQTGKI+IRGPQVM GY NNP ATA V+D+DG+FDTGDLGRFNP TGDL+VTGRAKDTIVL+NGENVEPQPLE             DAISG CS +DQVMLFGQDERFLGAIVCLNP  +GAAG+ISQ
Sbjct:  499 ETGQQVAVGQTGKILIRGPQVMSGYQNNPEATAAVIDKDGYFDTGDLGRFNPITGDLIVTGRAKDTIVLSNGENVEPQPLE-------------DAISGACSLIDQVMLFGQDERFLGAIVCLNPLNMGAAGIISQ 621          
BLAST of mRNA_H-elongata_contig129060.2135.1 vs. uniprot
Match: A0A836C922_9STRA (Long-chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C922_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.120e-42
Identity = 76/134 (56.72%), Postives = 95/134 (70.90%), Query Frame = 0
Query:    1 DTIRQLATGQTGKIVIRGPQVMDGYHNNPRATAEVMDRDGFFDTGDLGRFNPPTGDLVVTGRAKDTIVLNNGENVEPQPLEARWKDGRRGGGGGDAISGECSFVDQVMLFGQDERFLGAIVCLNPSALGAAGLI 134
            +T   +  G+ G +  +GPQ+M GY+ N  AT +VMD +GFFDTGDLGR NP TGDL++TGRAKDTIVL+NGENVEP+PLE             +A+ G+  FVDQVML GQDERFLG IV +NP+ L A GL+
Sbjct:  521 ETREPVPAGEIGVVCAKGPQIMAGYNRNEEATRQVMDSEGFFDTGDLGRINPATGDLILTGRAKDTIVLSNGENVEPEPLE-------------NAVVGKSDFVDQVMLVGQDERFLGGIVVVNPAGLAAGGLL 641          
BLAST of mRNA_H-elongata_contig129060.2135.1 vs. uniprot
Match: A0A7S2Y0I5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0I5_9STRA)

HSP 1 Score: 152 bits (384), Expect = 6.930e-41
Identity = 72/136 (52.94%), Postives = 96/136 (70.59%), Query Frame = 0
Query:    1 DTIRQLATGQTGKIVIRGPQVMDGYHNNPRATAEVMDRDGFFDTGDLGRFNPPTGDLVVTGRAKDTIVLNNGENVEPQPLEARWKDGRRGGGGGDAISGECSFVDQVMLFGQDERFLGAIVCLNPSALGAAGLISQ 136
            +T ++L  G+ G I+ RGPQ+M  Y +NP AT E +D +GFF+TGDLG  NPPTGD+V+TGRAKDTIVL+NGEN+ PQP+E             D + G C+ VDQ+ML GQDERFL A+  ++PS L + GLI++
Sbjct:  342 ETRKELPIGEKGLILARGPQIMREYMSNPEATREAIDDEGFFNTGDLGMVNPPTGDIVITGRAKDTIVLSNGENIAPQPIE-------------DLLIGNCATVDQMMLVGQDERFLSALAIVSPSGLESQGLITK 464          
BLAST of mRNA_H-elongata_contig129060.2135.1 vs. uniprot
Match: A0A1Z5JXZ7_FISSO (Long-chain acyl-CoA synthetase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JXZ7_FISSO)

HSP 1 Score: 147 bits (372), Expect = 1.220e-38
Identity = 72/129 (55.81%), Postives = 90/129 (69.77%), Query Frame = 0
Query:    1 DTIRQLATGQTGKIVIRGPQVMDGYHNNPRATAEVMDRDGFFDTGDLGRFNPPTGDLVVTGRAKDTIVLNNGENVEPQPLEARWKDGRRGGGGGDAISGECSFVDQVMLFGQDERFLGAIVCLNPSALG 129
            DT + +  G+ G I  RGPQ+M GY+ NP ATA V++  G+FDTGDLGR NP TGDL++TGRAKDTIVL+NGEN+EP P+E             DAI G+C  +DQ+ML GQD R + A+V L PSALG
Sbjct:  543 DTKQPVKIGEPGIIWGRGPQIMQGYYKNPEATAAVLNEKGWFDTGDLGRINPATGDLILTGRAKDTIVLSNGENIEPTPIE-------------DAILGQCELIDQIMLTGQDGRRVVAVVVLKPSALG 658          
BLAST of mRNA_H-elongata_contig129060.2135.1 vs. uniprot
Match: K0TN88_THAOC (AMP-binding domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TN88_THAOC)

HSP 1 Score: 147 bits (372), Expect = 1.250e-38
Identity = 76/129 (58.91%), Postives = 89/129 (68.99%), Query Frame = 0
Query:    6 LATGQTGKIVIRGPQVMDGYHNNPRATAEVMDRDGFFDTGDLGRFNPPTGDLVVTGRAKDTIVLNNGENVEPQPLEARWKDGRRGGGGGDAISGECSFVDQVMLFGQDERFLGAIVCLNPSALGAAGLI 134
            L  GQ G ++ RGPQVM GY+ N  AT+  +DR GFFDTGDLGR NP TGDL++TGRAKDTIVL+NGEN+EPQP+E             DAI    S V+QVML GQD R L AI  LNP+AL  AGL+
Sbjct:  558 LPIGQAGVVIGRGPQVMKGYYKNAEATSNAIDRFGFFDTGDLGRINPLTGDLILTGRAKDTIVLSNGENIEPQPIE-------------DAILSHSSLVEQVMLSGQDGRSLLAITVLNPNALVEAGLL 673          
BLAST of mRNA_H-elongata_contig129060.2135.1 vs. uniprot
Match: A0A7S2UNN2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNN2_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.360e-38
Identity = 72/133 (54.14%), Postives = 91/133 (68.42%), Query Frame = 0
Query:    4 RQLATGQTGKIVIRGPQVMDGYHNNPRATAEVMDRDGFFDTGDLGRFNPPTGDLVVTGRAKDTIVLNNGENVEPQPLEARWKDGRRGGGGGDAISGECSFVDQVMLFGQDERFLGAIVCLNPSALGAAGLISQ 136
            + +  G+ G ++ RGPQVM GY  NP ATA+ +D+ G+FDTGDLGR NP TGD+++TGR KDTIVL+NGEN+EP P+E             DAI  E S V+QVML GQD R L AIV LNPS L  AG +++
Sbjct:  575 KSVPIGEVGVVIARGPQVMKGYFKNPEATAKAVDKFGWFDTGDLGRVNPATGDIILTGRCKDTIVLSNGENIEPSPIE-------------DAILSESSLVEQVMLTGQDGRKLVAIVVLNPSELVGAGFLNK 694          
BLAST of mRNA_H-elongata_contig129060.2135.1 vs. uniprot
Match: A0A6U3B7E4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3B7E4_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.490e-37
Identity = 73/131 (55.73%), Postives = 90/131 (68.70%), Query Frame = 0
Query:    6 LATGQTGKIVIRGPQVMDGYHNNPRATAEVMDRDGFFDTGDLGRFNPPTGDLVVTGRAKDTIVLNNGENVEPQPLEARWKDGRRGGGGGDAISGECSFVDQVMLFGQDERFLGAIVCLNPSALGAAGLISQ 136
            L  GQ G ++ RGPQVM GY+ N +ATAE +D +G+F++GDLGR NP TGDL++TGRAKDTIVL+NGEN+EP P+E             DAI G+ S VDQVML GQD R L AI  L+P+ L  AG I  
Sbjct:  302 LPDGQAGVVLGRGPQVMLGYYKNEKATAETIDPNGWFNSGDLGRINPATGDLILTGRAKDTIVLSNGENIEPTPIE-------------DAILGQSSLVDQVMLTGQDGRRLVAIAVLSPNELANAGFIKD 419          
BLAST of mRNA_H-elongata_contig129060.2135.1 vs. uniprot
Match: A0A7S1VYX9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYX9_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.090e-37
Identity = 71/131 (54.20%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    4 RQLATGQTGKIVIRGPQVMDGYHNNPRATAEVMDRDGFFDTGDLGRFNPPTGDLVVTGRAKDTIVLNNGENVEPQPLEARWKDGRRGGGGGDAISGECSFVDQVMLFGQDERFLGAIVCLNPSALGAAGLI 134
            + L  G+ G ++ RGPQVM GY+ NP ATA+ +D+ G+FDTGDLGR NP TGDL++TGR KDTIVL+NGEN+EP P+E             DAI  E S ++QVML GQD R L AI  L P+ L  AG I
Sbjct:  593 KALPDGEVGVVIARGPQVMKGYYKNPEATAKAIDQYGWFDTGDLGRINPATGDLILTGRCKDTIVLSNGENIEPSPIE-------------DAILSESSLIEQVMLIGQDGRSLTAIAVLTPNELVNAGYI 710          
BLAST of mRNA_H-elongata_contig129060.2135.1 vs. uniprot
Match: U5TRI0_PHATR (Long-chain acyl-CoA synthetase 2 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=U5TRI0_PHATR)

HSP 1 Score: 142 bits (359), Expect = 5.580e-37
Identity = 72/131 (54.96%), Postives = 89/131 (67.94%), Query Frame = 0
Query:    6 LATGQTGKIVIRGPQVMDGYHNNPRATAEVMDRDGFFDTGDLGRFNPPTGDLVVTGRAKDTIVLNNGENVEPQPLEARWKDGRRGGGGGDAISGECSFVDQVMLFGQDERFLGAIVCLNPSALGAAGLISQ 136
            L  G+ G ++ RGPQ+M GY+ +   T + +D+ GFFDTGDLGR NP TGDL++TGRAKDTIVL+NGENVEP PLE             DAI GE S ++QVML GQD R L AIV L+PS L   G +S+
Sbjct:  465 LPAGEVGVVIARGPQIMKGYYKDVAETKKAIDQFGFFDTGDLGRVNPATGDLILTGRAKDTIVLSNGENVEPGPLE-------------DAILGELSLIEQVMLTGQDGRKLTAIVVLSPSELANEGFLSK 582          
BLAST of mRNA_H-elongata_contig129060.2135.1 vs. uniprot
Match: B8C658_THAPS (AMP-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C658_THAPS)

HSP 1 Score: 142 bits (359), Expect = 7.670e-37
Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 0
Query:    4 RQLATGQTGKIVIRGPQVMDGYHNNPRATAEVMDRDGFFDTGDLGRFNPPTGDLVVTGRAKDTIVLNNGENVEPQPLEARWKDGRRGGGGGDAISGECSFVDQVMLFGQDERFLGAIVCLNPSALGAAGLISQ 136
            + L  G  G ++ RGPQVM GY+ NP AT + +D+ G+FDTGDLGR NP TGDL++TGRAKDTIVL+NGEN+EPQP+E             DAI  E   V+QVML GQD R L AI  L+P+ L  AGL+ +
Sbjct:  570 KALPDGLAGVVLGRGPQVMKGYYKNPEATGKAVDKWGWFDTGDLGRINPATGDLILTGRAKDTIVLSNGENIEPQPIE-------------DAIMSESDLVEQVMLSGQDGRSLIAITVLSPNELVNAGLLEE 689          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig129060.2135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ64_ECTSI9.570e-6073.53Long chain acyl-CoA synthetase n=1 Tax=Ectocarpus ... [more]
A0A836C922_9STRA1.120e-4256.72Long-chain acyl-CoA synthetase n=1 Tax=Tribonema m... [more]
A0A7S2Y0I5_9STRA6.930e-4152.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z5JXZ7_FISSO1.220e-3855.81Long-chain acyl-CoA synthetase n=2 Tax=Fistulifera... [more]
K0TN88_THAOC1.250e-3858.91AMP-binding domain-containing protein n=1 Tax=Thal... [more]
A0A7S2UNN2_9STRA3.360e-3854.14Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6U3B7E4_9STRA1.490e-3755.73Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1VYX9_9STRA3.090e-3754.20Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
U5TRI0_PHATR5.580e-3754.96Long-chain acyl-CoA synthetase 2 n=3 Tax=Phaeodact... [more]
B8C658_THAPS7.670e-3754.14AMP-binding domain-containing protein n=1 Tax=Thal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000873AMP-dependent synthetase/ligasePFAMPF00501AMP-bindingcoord: 4..69
e-value: 8.7E-21
score: 74.0
IPR042099AMP-dependent synthetase-like superfamilyGENE3D3.40.50.12780coord: 1..65
e-value: 4.2E-21
score: 77.1
NoneNo IPR availablePANTHERPTHR43813FAMILY NOT NAMEDcoord: 2..129
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 5..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig129060contigH-elongata_contig129060:337..1751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig129060.2135.1mRNA_H-elongata_contig129060.2135.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig129060 337..1751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig129060.2135.1 ID=prot_H-elongata_contig129060.2135.1|Name=mRNA_H-elongata_contig129060.2135.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
DTIRQLATGQTGKIVIRGPQVMDGYHNNPRATAEVMDRDGFFDTGDLGRF
NPPTGDLVVTGRAKDTIVLNNGENVEPQPLEARWKDGRRGGGGGDAISGE
CSFVDQVMLFGQDERFLGAIVCLNPSALGAAGLISQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
IPR042099AMP-dep_Synthh-like_sf