prot_H-elongata_contig12892.2128.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12892.2128.1
Unique Nameprot_H-elongata_contig12892.2128.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length189
Homology
BLAST of mRNA_H-elongata_contig12892.2128.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 6.660e-53
Identity = 97/189 (51.32%), Postives = 127/189 (67.20%), Query Frame = 0
Query:    2 SFIDDEFELHELAMNCKKMSGKTTGTDLADNVKGLIDSHGMAGRVTAAVTDCEPSMIVCSLELEERDIT-THIGCCNHRFECTTALVFKGPGVKRTIALQLALVTRYTKSSQMADRLEEMCGIPKVPSLQVMQDVETRWNSTFSSIKRTRQLRNVIQLHERLDNIATLLRDDDWEVLKLVKPIFRPFME 189
            ++ID E++LH L+++C K +G TTG DLA  V G+++ H + GRV A VTDCEPSMI     LE    T +HIGC NHR E TT+ VF G  +   + L   LV RY KSSQMA RL ++CGI ++  L VMQDVETRW ST++ + R   L   I+LHE +D +  LL D DWEVL+L++PI RPFM+
Sbjct:   62 AYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMK 249          
BLAST of mRNA_H-elongata_contig12892.2128.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 6.770e-52
Identity = 90/187 (48.13%), Postives = 123/187 (65.78%), Query Frame = 0
Query:    2 SFIDDEFELHELAMNCKKMSGKTTGTDLADNVKGLIDSHGMAGRVTAAVTDCEPSMIVCSLELEERDITTHIGCCNHRFECTTALVFKGPGVKRTIALQLALVTRYTKSSQMADRLEEMCGIPKVPSLQVMQDVETRWNSTFSSIKRTRQLRNVIQLHERLDNIATLLRDDDWEVLKLVKPIFRPFM 188
            ++I   F+L  L + CKK  G+TTG DL + VK +I  +G+  R  A  TDCEPSM+     LEE +  TH+GC  HR E  T+  F GPGV + +AL   +VTRY  SSQ +DRLE+M  I +V   +V+QDVETRW ST++SI R   LR  I  HER+D+I  LL++ DWEVL++V+P+ +PF+
Sbjct:   71 TYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFI 257          
BLAST of mRNA_H-elongata_contig12892.2128.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 4.010e-50
Identity = 93/189 (49.21%), Postives = 124/189 (65.61%), Query Frame = 0
Query:    2 SFIDDEFELHELAMNCKKMSGKTTGTDLADNVKGLIDSHGMAGRVTAAVTDCEPSMIVCSLELEERDITT-HIGCCNHRFECTTALVFKGPGVKRTIALQLALVTRYTKSSQMADRLEEMCGIPKVPSLQVMQDVETRWNSTFSSIKRTRQLRNVIQLHERLDNIATLLRDDDWEVLKLVKPIFRPFME 189
            ++ID  ++LH L++NC K +G T G DLA  +  +I+ HG+ GRVTA VTDCEPSM+     LE       HIGC NHR E TT+ VF G  +   +A   A+V RY +SSQM+ RL    GI K+  L V+QDVETRW S+++ I+R   L   I+LHE  DNIA +L + DWEVL+L++PI RPFM+
Sbjct:   98 AYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQ 285          
BLAST of mRNA_H-elongata_contig12892.2128.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 6.960e-47
Identity = 88/187 (47.06%), Postives = 118/187 (63.10%), Query Frame = 0
Query:    2 SFIDDEFELHELAMNCKKMSGKTTGTDLADNVKGLIDSHGMAGRVTAAVTDCEPSMIVCSLELEERDITTHIGCCNHRFECTTALVFKGPGVKRTIALQLALVTRYTKSSQMADRLEEMCGIPKVPSLQVMQDVETRWNSTFSSIKRTRQLRNVIQLHERLDNIATLLRDDDWEVLKLVKPIFRPFM 188
            ++I   F+L  L + CKK   +T G DL + VK +I  +G+ GR  A  TDCE SM+     LEE +  TH+GC  HR E  T+  F GPGV + +AL   +VTRYT SSQ +DRLE++C I +V    V+QDVETRW ST+ SI R   LR  I  HE +D+   LL++ DWEVL+LV+ + +PFM
Sbjct:   27 TYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFM 213          
BLAST of mRNA_H-elongata_contig12892.2128.1 vs. uniprot
Match: A0A7E5WZM1_TRINI (zinc finger BED domain-containing protein 1-like n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5WZM1_TRINI)

HSP 1 Score: 80.9 bits (198), Expect = 2.040e-14
Identity = 55/190 (28.95%), Postives = 92/190 (48.42%), Query Frame = 0
Query:    3 FIDDEFELHELAMNCKKMSGKTTGTDLADNVKGLIDSHGMAGRVTAAVTDCEPSMIVCSLELEERDITTHIGCCNHRFECTT--ALVFKGPGVKRTIALQLALVTRYTKSSQMADRLEEMCGIPKVPSLQVMQDVETRWNSTFSSIKRTRQLRNVIQLHERLDNI-ATLLRDDDWEVLKLVKPIFRPFME 189
            +I  + E   + + C   SG  T T++AD +  LID+ G+  ++  AV+D   +++     ++E     H GC  H        ALV     VK  I     +V  Y +S+  ++RL +     +     ++QDVETRWNSTF  ++R  +L+  ++    L N    ++ +D+W  L  +  I RPF E
Sbjct:  217 YITKDLEFKTVLLGCCHFSGNHTATNIADEISALIDNWGLKDKINFAVSDNATNVVKA---IKEGLGWKHFGCFAHTLNLIVNDALVL----VKGLIEKVKTIVAHYKRSTVSSERLSKYQVQQQQTPKHLIQDVETRWNSTFYMVRRFIELQEAVRSTLALVNKNLPVITNDEWSTLSQLCQILRPFEE 399          
BLAST of mRNA_H-elongata_contig12892.2128.1 vs. uniprot
Match: UPI000C143D9D (zinc finger BED domain-containing protein 1-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C143D9D)

HSP 1 Score: 77.0 bits (188), Expect = 4.360e-13
Identity = 52/188 (27.66%), Postives = 87/188 (46.28%), Query Frame = 0
Query:    3 FIDDEFELHELAMNCKKMSGKTTGTDLADNVKGLIDSHGMAGRVTAAVTDCEPSMIVCSLELEERDITTHIGCCNHRFECTTALVFKGPGVKRTIALQLALVTRYTKSSQMADRLEEMCGIPKVPSLQVMQDVETRWNSTFSSIKRTRQLRNVIQLHERL-DNIATLLRDDDWEVLKLVKPIFRPFME 189
            +++D FE   + + C   SG  T  ++A  +K ++D  G+ G+V   V+D   +++    E+       H GC  H          K    K  I     +VT Y KS+  A+RL +      +    ++QDV+TRWNSTF  + R  +L+  ++    L D     L  +DW + + +  + RPF E
Sbjct:  210 YLNDVFEFKTVLLGCCYFSGNHTSQNIASEIKDIVDRWGINGKVNFVVSDNGANVVKAVKEILG---LKHFGCFAHTLNLIVQDGLKF--CKDKIDKVRRIVTHYKKSTVSAERLAKYQLQQNIQPKHLIQDVDTRWNSTFYMLSRFVELKEAVRSTMALIDRDLPQLTAEDWSMFEELIVVLRPFEE 392          
BLAST of mRNA_H-elongata_contig12892.2128.1 vs. uniprot
Match: UPI0019556103 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019556103)

HSP 1 Score: 76.6 bits (187), Expect = 5.600e-13
Identity = 49/196 (25.00%), Postives = 88/196 (44.90%), Query Frame = 0
Query:    1 ASFIDDEFELHELAMNCKKMSGKTTGTDLADNVKGLIDSHGMAGRVTAAVTDCEPSMIVCSLELEERDITTH---IGCCNHRFECTTALVFKGPGVKRTIALQLALVTRYTKSSQMADRLEEMCGIPKVPSLQVMQDVETRWNSTFSSIKRTRQLRNVI-------QLHERLDNIATLLRDDDWEVLKLVKPIFRP 186
            A FID +++   L +  K+M    TG ++A  +  + D+ G+ G++ + V D   +M +C   L+E         + C  H  +       K   + R +A    LV  + K  +    L++      VP  +++QDV TRWNSTFS ++R  + R  I          ++ D+    L    W  ++ +K + +P
Sbjct:   76 AHFIDGDWKAQSLVLETKQMEEAHTGINIAARLSEVADTFGIQGKIVSVVCDNAANMTLCVETLKESHKWAEMQGVRCAGHTLQLCINAALKQDPICRAVAASRHLVGHFKKGHKAKTGLKQKQEQQNVPQHELIQDVSTRWNSTFSMLERLLEQRWPITAVLSDPNFTKKSDSSTLDLTTAHWNAIEDIKNVLKP 271          
BLAST of mRNA_H-elongata_contig12892.2128.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI)

HSP 1 Score: 74.7 bits (182), Expect = 2.720e-12
Identity = 46/188 (24.47%), Postives = 85/188 (45.21%), Query Frame = 0
Query:    1 ASFIDDEFELHELAMNCKKMSGKTTGTDLADNVKGLIDSHGMAGRVTAAVTDCEPSMIVCSLELEERDITTHIGCCNHRFECTTALVFKGPGVKRTIALQLALVTRYTKSSQMADRLEEMCGIPKVPSLQVMQDVETRWNSTFSSIKRTRQLRNVIQLHERL-DNIATLLRDDDWEVLKLVKPIFRPF 187
            A F+D+ F+LH L + C K        D+A  +K +    G+  ++  AV+D   +M     +L E     H GC  H          K   ++  +     +V  + +S    ++L       +   L+++Q+V+TRWNST+  ++R   L   I+    + D     L  ++W++LK +  I +P+
Sbjct:  203 AHFLDENFKLHSLLLECSKTDASHKAEDIAGTLKRITQYWGIDQKIILAVSDNASNMQKAIQQLLE---WKHFGCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPY 387          
BLAST of mRNA_H-elongata_contig12892.2128.1 vs. uniprot
Match: UPI000CE20A6F (zinc finger BED domain-containing protein 4-like n=1 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE20A6F)

HSP 1 Score: 73.2 bits (178), Expect = 6.170e-12
Identity = 53/193 (27.46%), Postives = 90/193 (46.63%), Query Frame = 0
Query:    3 FIDDEFELHELAMNCKKMSGKTTGTDLADNVKGLIDSHGMAGRVTAAVTDCEPSMIVCSLELEERDITTHIGCCNHRFECTTAL-VFKGPGVKRTIALQLALVTRYTKSSQMADRLEEMCGIPKVPSLQVMQDVETRWNSTFSSIKRTRQLRNVI-----QLHERLDNIATLLRDDDWEVLKLVKPIFRPFME 189
            FI +E EL  + +   K     T   LA+    L++  G+ G+VT  VTDC P+M+ C+  L    +  HI C  H         + + P ++   +    +V  +  S+   ++L EM      P  ++MQ+VETRWNSTF+ ++R  + R  +      LH  L  + +    +D++ +     +  PF E
Sbjct:  122 FITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANIL----LLRHIMCFAHMLNLVVKKSLAQTPELEDVRSKGRRIVGLFKSSTTAKEKLSEMERQLARPEHKLMQEVETRWNSTFNMLERLFKEREPLGAALATLHTDLPPLTS----EDYQAIHHCLSVLSPFQE 306          
BLAST of mRNA_H-elongata_contig12892.2128.1 vs. uniprot
Match: UPI000CE219EE (zinc finger BED domain-containing protein 4-like n=2 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE219EE)

HSP 1 Score: 72.8 bits (177), Expect = 8.530e-12
Identity = 58/198 (29.29%), Postives = 92/198 (46.46%), Query Frame = 0
Query:    3 FIDDEFELHELAMNCKKMSGKTTGTDLADNVKGLIDSHGMAGRVTAAVTDCEPSMIVCSLELEERDITTHIGCCNHRFECTTALVFKGPGVKRTIALQ------LALVTRYTKSSQMADRLEEMCGIPKVPSLQVMQDVETRWNSTFSSIKRTRQLRNVI-----QLHERLDNIATLLRDDDWEVLKLVKPIFRPFME 189
            FI +E EL  + +   K     T   LA+    L++  G+ G+VT  VTDC P+M+ C+  L    +  HI C  H       LV K P + +T  L+        +V  +  S+   ++L EM      P  +++Q+VETRWNSTF+ ++R  + R  +      LH  L  +      +D++ +     I  PF E
Sbjct:  161 FITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANTL----LLRHIMCFAHMLN----LVVKKP-LAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDLPPLTA----EDYQAIHHCLSILSPFQE 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12892.2128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI6.660e-5351.32Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JJV8_9PHAE6.770e-5248.13Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KUY5_9PHAE4.010e-5049.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHP9_9PHAE6.960e-4747.06Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A7E5WZM1_TRINI2.040e-1428.95zinc finger BED domain-containing protein 1-like n... [more]
UPI000C143D9D4.360e-1327.66zinc finger BED domain-containing protein 1-like n... [more]
UPI00195561035.600e-1325.00E3 SUMO-protein ligase ZBED1-like n=1 Tax=Pimephal... [more]
A0A224XKI7_9HEMI2.720e-1224.47Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylu... [more]
UPI000CE20A6F6.170e-1227.46zinc finger BED domain-containing protein 4-like n... [more]
UPI000CE219EE8.530e-1229.29zinc finger BED domain-containing protein 4-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12892contigH-elongata_contig12892:3846..4412 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12892.2128.1mRNA_H-elongata_contig12892.2128.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12892 3846..4412 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12892.2128.1 ID=prot_H-elongata_contig12892.2128.1|Name=mRNA_H-elongata_contig12892.2128.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp
ASFIDDEFELHELAMNCKKMSGKTTGTDLADNVKGLIDSHGMAGRVTAAV
TDCEPSMIVCSLELEERDITTHIGCCNHRFECTTALVFKGPGVKRTIALQ
LALVTRYTKSSQMADRLEEMCGIPKVPSLQVMQDVETRWNSTFSSIKRTR
QLRNVIQLHERLDNIATLLRDDDWEVLKLVKPIFRPFME
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf