prot_H-elongata_contig128798.2119.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig128798.2119.1
Unique Nameprot_H-elongata_contig128798.2119.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig128798.2119.1 vs. uniprot
Match: D8LDG4_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG4_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.010e-24
Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    6 HTHTXXXRYLNSPVTFDMTGEIVKAANTLLNFTGDNAIEGADSIPRDLIAEAKGLAFITFFKAS 69
            H+     RYLNSPVTFD+TGEI+KA+NTLLNFTGDN IEGADSIP+DLIA+A+GLAFITF KA 
Sbjct:  106 HSRASVERYLNSPVTFDLTGEILKASNTLLNFTGDNVIEGADSIPQDLIADARGLAFITFVKAG 169          
BLAST of mRNA_H-elongata_contig128798.2119.1 vs. uniprot
Match: A0A7S4DC62_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC62_HETAK)

HSP 1 Score: 72.8 bits (177), Expect = 2.460e-13
Identity = 30/60 (50.00%), Postives = 46/60 (76.67%), Query Frame = 0
Query:   13 RYLNSPVTFDMTGEIVKAANTLLNFTGDNAIEGADSIPRDLIAEAKGLAFITFFKASYIY 72
            RY N+P +F +  +I KA+ TLLNFT +N +EGAD++PR+L+ EA+G+A +TF KA + +
Sbjct:  131 RYFNAPFSFSLADQIKKASYTLLNFTAENQLEGADTLPRELLWEAEGIAILTFVKAGFFF 190          
BLAST of mRNA_H-elongata_contig128798.2119.1 vs. uniprot
Match: A0A835Z286_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z286_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.240e-6
Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   14 YLNSPVTFDMTGEIVKAANTLLNFTGDNAIEGADSIPRDLIAEAKGLAFITFFKAS 69
            YLN P++F +  E+ KAA ++LNF     ++  +SIP +L+A AKGLAF+T  KA 
Sbjct:  182 YLNKPLSFTLGAEVRKAAYSVLNFMRTGVVQD-NSIPTELLARAKGLAFMTVLKAG 236          
BLAST of mRNA_H-elongata_contig128798.2119.1 vs. uniprot
Match: A0A1D1ZDG1_9ARAE (SH3 domain-containing protein PJ696.02 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZDG1_9ARAE)

HSP 1 Score: 49.3 bits (116), Expect = 4.790e-5
Identity = 23/60 (38.33%), Postives = 36/60 (60.00%), Query Frame = 0
Query:   15 LNSPVTFDMTGEIVKAANTLLNFTGDNAIEGA--DSIPRDLIAEAKGLAFITFFKASYIY 72
            +NSP+  D+  ++ KAA  L +FT    +EG   + IP+D+ A AKG+A  T  KA + +
Sbjct:   67 VNSPLPSDLVSQVQKAAKVLASFTDPEKVEGGLDNVIPKDVFANAKGIAIYTCIKAGFFW 126          
BLAST of mRNA_H-elongata_contig128798.2119.1 vs. uniprot
Match: M4BN30_HYAAE (FYVE-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN30_HYAAE)

HSP 1 Score: 48.5 bits (114), Expect = 9.470e-5
Identity = 22/60 (36.67%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   13 RYLNSPVTFDMTGEIVKAANTLLNFTGDNAIEGADSIPRDLIAEAKGLAFITFFKASYIY 72
            R +NSP ++ +  EI+KA  ++ NFT    ++   SIP  L+  AKG+AF+T  K  +++
Sbjct:  113 RLVNSPYSYTLKEEILKATYSIKNFTSQGIVKDR-SIPLPLLTHAKGIAFLTVIKMGFVF 171          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig128798.2119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LDG4_ECTSI1.010e-2476.56FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S4DC62_HETAK2.460e-1350.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835Z286_9STRA2.240e-646.43FYVE-type domain-containing protein n=1 Tax=Tribon... [more]
A0A1D1ZDG1_9ARAE4.790e-538.33SH3 domain-containing protein PJ696.02 n=1 Tax=Ant... [more]
M4BN30_HYAAE9.470e-536.67FYVE-type domain-containing protein n=1 Tax=Hyalop... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig128798contigH-elongata_contig128798:1598..1819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig128798.2119.1mRNA_H-elongata_contig128798.2119.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig128798 1598..1819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig128798.2119.1 ID=prot_H-elongata_contig128798.2119.1|Name=mRNA_H-elongata_contig128798.2119.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
MCNLIHTHTHTHRYLNSPVTFDMTGEIVKAANTLLNFTGDNAIEGADSIP
RDLIAEAKGLAFITFFKASYIYI*
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