prot_H-elongata_contig128523.2100.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig128523.2100.1
Unique Nameprot_H-elongata_contig128523.2100.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig128523.2100.1 vs. uniprot
Match: D8LGN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN8_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 2.120e-38
Identity = 70/87 (80.46%), Postives = 78/87 (89.66%), Query Frame = 0
Query:    1 PPKIPEELEGVLREIAAVGVPYYGWGALKELLTARMAEAVESLEREAGFQRTNGGKDYTQRRDELVAALRRFEAAPFTLQRLAEVLQ 87
            PPKIP ELEGVLREIAAVGVPYYGWG LKELL ARM++AV +L +++GF R  GGKDY QRRDELVA+LRRF+AAPFTLQRLAEVLQ
Sbjct:   69 PPKIPPELEGVLREIAAVGVPYYGWGGLKELLAARMSQAVGALRKDSGFFRAAGGKDYPQRRDELVASLRRFDAAPFTLQRLAEVLQ 155          
BLAST of mRNA_H-elongata_contig128523.2100.1 vs. uniprot
Match: A0A835ZCH9_9STRA (Protein phosphatase 4 core regulatory subunit R2 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH9_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.090e-21
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    4 IPEELEGVLREIAAVGVPYYGWGALKELLTARMAEAVESLEREAGFQRTNGGKDYTQRRDELVAALRRFEAAPFTLQRLAEVL 86
            IP ELE VL E+A  GVPYY W  L+ELL A++   ++      G++   GG+ +TQR+ +LV ALR F+ APFTLQRLAEVL
Sbjct:    1 IPAELERVLEEMAKEGVPYYTWAGLRELLEAKLVAVIDGFNASFGYEEDKGGRPFTQRKTDLVEALRSFDGAPFTLQRLAEVL 83          
BLAST of mRNA_H-elongata_contig128523.2100.1 vs. uniprot
Match: R7TSH7_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TSH7_CAPTE)

HSP 1 Score: 53.1 bits (126), Expect = 1.030e-6
Identity = 29/89 (32.58%), Postives = 45/89 (50.56%), Query Frame = 0
Query:    4 IPEELEGVLREIAAVGVPYYGWGALKELLTARMAEAVESLEREAGFQRTN------GGKDYTQRRDELVAALRRFEAAPFTLQRLAEVL 86
            IPE LE  L+ IA  G   + WG LK L   R+++A+          ++N          +   RD ++ A++ F  APFT+QRL E++
Sbjct:   22 IPEILESYLKHIAKTGTTVFPWGKLKPLFEQRLSQAISEFHERFPMDKSNVVSANVESLSFDVMRDRILEAIKTFSGAPFTIQRLCELI 110          
BLAST of mRNA_H-elongata_contig128523.2100.1 vs. uniprot
Match: A0A6B2LEP6_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LEP6_9EUKA)

HSP 1 Score: 53.1 bits (126), Expect = 2.870e-6
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 0
Query:    4 IPEELEGVLREIAAVGVPYYGWGALKELLTARMAEAVESLEREAGFQRTNGGKDYTQRRDELVAALRRFEAAPFTLQRLAEVL 86
            IPE LEGV+ +I+  GV  Y W  LKEL+  +M   +        + +     ++ Q +  L   LR+F  APFTLQR+ E+L
Sbjct:   13 IPEILEGVIVDISKTGVTCYPWPLLKELIVTKMVLVLNE------YNQKTPHNNFDQEKTRLSEMLRQFPEAPFTLQRITELL 89          
BLAST of mRNA_H-elongata_contig128523.2100.1 vs. uniprot
Match: A0A6S8BB95_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8BB95_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 2.060e-5
Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 0
Query:    8 LEGVLREIAAVGVPYYGWGALKELLTARMAEAVESLEREAGFQRTNG----GKDYTQRRDELVAALRRFEAAPFTLQRLAEVL 86
            L  +L  +   GVP Y W  LK L++  + ++V    +    Q T+     G  +  +RD LV++L  F+ APFTLQRL E++
Sbjct:   24 LRSILETMRKYGVPQYEWSELKPLVSQALTQSVNEFRK--NHQNTDPEDKPGHSFEDQRDRLVSSLNVFDGAPFTLQRLCELI 104          
BLAST of mRNA_H-elongata_contig128523.2100.1 vs. uniprot
Match: A0A2R5GI57_9STRA (Serine/threonine-protein phosphatase 4 regulatory subunit 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI57_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 4.280e-5
Identity = 29/88 (32.95%), Postives = 50/88 (56.82%), Query Frame = 0
Query:    3 KIPEELEGVLREIAAVGVPYYGWGALKELLTARMAEAVESLEREAGFQRTNGGKD----YTQRRDELVAALRRFEAAPFTLQRLAEVL 86
            ++ ++L GVL ++   GVP Y W  LK L+     +A+++  +E     T+  +     Y  ++  L++A+  FE APFTLQRL E++
Sbjct:   13 QVTDKLRGVLEDMRTTGVPKYEWALLKPLVHVATEQALDNFRKE--HPNTDPVEQDQPAYDAQKQRLLSAIDLFEGAPFTLQRLCELI 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig128523.2100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LGN8_ECTSI2.120e-3880.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZCH9_9STRA2.090e-2153.01Protein phosphatase 4 core regulatory subunit R2 (... [more]
R7TSH7_CAPTE1.030e-632.58Uncharacterized protein n=1 Tax=Capitella teleta T... [more]
A0A6B2LEP6_9EUKA2.870e-637.35Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A6S8BB95_9STRA2.060e-534.94Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A2R5GI57_9STRA4.280e-532.95Serine/threonine-protein phosphatase 4 regulatory ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015267Protein phosphatase 4 core regulatory subunit R2PFAMPF09184PPP4R2coord: 3..86
e-value: 3.5E-6
score: 26.8
IPR015267Protein phosphatase 4 core regulatory subunit R2PANTHERPTHR16487PPP4R2-RELATED PROTEINcoord: 3..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig128523contigH-elongata_contig128523:67..900 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig128523.2100.1mRNA_H-elongata_contig128523.2100.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig128523 67..900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig128523.2100.1 ID=prot_H-elongata_contig128523.2100.1|Name=mRNA_H-elongata_contig128523.2100.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
PPKIPEELEGVLREIAAVGVPYYGWGALKELLTARMAEAVESLEREAGFQ
RTNGGKDYTQRRDELVAALRRFEAAPFTLQRLAEVLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015267PPP4R2