prot_H-elongata_contig128475.2093.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig128475.2093.1
Unique Nameprot_H-elongata_contig128475.2093.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig128475.2093.1 vs. uniprot
Match: A0A6H5L2M1_9PHAE (Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2M1_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 4.580e-31
Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = 0
Query:    1 EGNEEVLLALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDAALGAIDEV 62
            EGNEEVL+ALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRD AL AI++V
Sbjct:  489 EGNEEVLVALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALSAIEKV 550          
BLAST of mRNA_H-elongata_contig128475.2093.1 vs. uniprot
Match: A0A7S1ZYZ0_9STRA (Isoleucine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYZ0_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.400e-24
Identity = 49/62 (79.03%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 EGNEEVLLALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDAALGAIDEV 62
            EGNEEV+ AL+E G LL  E Y HKYPYDWRTKKPTIFRATDQWFASV+ FRDAAL AID V
Sbjct:  455 EGNEEVVTALQETGSLLRAEDYGHKYPYDWRTKKPTIFRATDQWFASVEGFRDAALDAIDTV 516          
BLAST of mRNA_H-elongata_contig128475.2093.1 vs. uniprot
Match: A0A7S2XYB8_9STRA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYB8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.950e-24
Identity = 47/62 (75.81%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 EGNEEVLLALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDAALGAIDEV 62
            +GN EV+ ALEE G LL  E Y HKYPYDWRTKKPTIFRATDQWFASVD FRD A+ AID+V
Sbjct:  208 DGNTEVIAALEEKGSLLLGEDYNHKYPYDWRTKKPTIFRATDQWFASVDSFRDDAMAAIDKV 269          
BLAST of mRNA_H-elongata_contig128475.2093.1 vs. uniprot
Match: A0A0G4HKH4_9ALVE (Isoleucine--tRNA ligase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HKH4_9ALVE)

HSP 1 Score: 102 bits (255), Expect = 4.860e-24
Identity = 47/62 (75.81%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    1 EGNEEVLLALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDAALGAIDEV 62
            +GNEE + AL EAG LL  EAY HKYPYDWRTKKPTIFRATDQWFASVD FRD A  AID +
Sbjct:  489 DGNEECVQALTEAGALLLEEAYSHKYPYDWRTKKPTIFRATDQWFASVDAFRDRAFEAIDSI 550          
BLAST of mRNA_H-elongata_contig128475.2093.1 vs. uniprot
Match: A0A1X6NSU2_PORUM (Isoleucine--tRNA ligase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSU2_PORUM)

HSP 1 Score: 101 bits (251), Expect = 1.690e-23
Identity = 47/62 (75.81%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 EGNEEVLLALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDAALGAIDEV 62
            EGN+ VL AL EAG LLA EAY HKYPYDWR+KKPTIFRATDQWFAS+D FR A L A+D V
Sbjct:  519 EGNQAVLDALAEAGALLAEEAYPHKYPYDWRSKKPTIFRATDQWFASIDGFRGAVLDAVDTV 580          
BLAST of mRNA_H-elongata_contig128475.2093.1 vs. uniprot
Match: A0A2D2Q1A4_THELV (Isoleucine--tRNA ligase n=1 Tax=Synechococcus lividus PCC 6715 TaxID=1917166 RepID=A0A2D2Q1A4_THELV)

HSP 1 Score: 100 bits (250), Expect = 2.300e-23
Identity = 48/62 (77.42%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 EGNEEVLLALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDAALGAIDEV 62
            EGNE V++ALE AG LL  E Y HKYPYDWRTKKPTIFRAT+QWFASV  FRDAAL AI EV
Sbjct:  386 EGNEAVIVALEAAGALLKEEPYVHKYPYDWRTKKPTIFRATEQWFASVAGFRDAALAAIAEV 447          
BLAST of mRNA_H-elongata_contig128475.2093.1 vs. uniprot
Match: L1JBT3_GUITC (Isoleucine--tRNA ligase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBT3_GUITC)

HSP 1 Score: 100 bits (250), Expect = 2.300e-23
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 EGNEEVLLALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDAALGAIDEV 62
            +GNE VL  +EEAG L+  E Y HKYPYDWRTKKPTIFRATDQWFASV+ FR+ A+GAID V
Sbjct:  400 DGNERVLELMEEAGALIKEEEYGHKYPYDWRTKKPTIFRATDQWFASVENFREKAMGAIDTV 461          
BLAST of mRNA_H-elongata_contig128475.2093.1 vs. uniprot
Match: A0A0G4EG48_VITBC (Isoleucine--tRNA ligase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG48_VITBC)

HSP 1 Score: 100 bits (249), Expect = 3.150e-23
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 EGNEEVLLALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDAALGAIDEV 62
            EGNE ++ AL+E G LL  E Y H+YPYDWRTKKPTIFRAT+QWF SVD FR+AAL AIDEV
Sbjct:  535 EGNEAIIQALDECGSLLKAEDYPHRYPYDWRTKKPTIFRATEQWFISVDAFREAALAAIDEV 596          
BLAST of mRNA_H-elongata_contig128475.2093.1 vs. uniprot
Match: A0A7S0LI09_9EUKA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LI09_9EUKA)

HSP 1 Score: 100 bits (248), Expect = 4.290e-23
Identity = 46/62 (74.19%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    1 EGNEEVLLALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDAALGAIDEV 62
            +GN  V+ AL+EAG LLA E Y HKYPYDWRTKKPTIFRAT QWFASVD FRD AL AI+ V
Sbjct:  427 DGNTAVITALQEAGALLASEGYAHKYPYDWRTKKPTIFRATSQWFASVDAFRDDALSAIESV 488          
BLAST of mRNA_H-elongata_contig128475.2093.1 vs. uniprot
Match: A0A3N5IE16_9CHRO (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Chroococcales cyanobacterium metabat2.561 TaxID=2485785 RepID=A0A3N5IE16_9CHRO)

HSP 1 Score: 99.4 bits (246), Expect = 7.160e-23
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 EGNEEVLLALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDAALGAIDEV 62
            + NE ++LAL E G LL  EAYQHKYPYDWRTKKPTIFRAT+QWFASV+ FR+ AL AID V
Sbjct:  379 DANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSV 440          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig128475.2093.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2M1_9PHAE4.580e-3191.94Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1ZYZ0_9STRA1.400e-2479.03Isoleucine--tRNA ligase n=1 Tax=Ditylum brightwell... [more]
A0A7S2XYB8_9STRA1.950e-2475.81Isoleucine--tRNA ligase (Fragment) n=1 Tax=Fibroca... [more]
A0A0G4HKH4_9ALVE4.860e-2475.81Isoleucine--tRNA ligase n=1 Tax=Chromera velia CCM... [more]
A0A1X6NSU2_PORUM1.690e-2375.81Isoleucine--tRNA ligase n=1 Tax=Porphyra umbilical... [more]
A0A2D2Q1A4_THELV2.300e-2377.42Isoleucine--tRNA ligase n=1 Tax=Synechococcus livi... [more]
L1JBT3_GUITC2.300e-2372.58Isoleucine--tRNA ligase n=1 Tax=Guillardia theta (... [more]
A0A0G4EG48_VITBC3.150e-2372.58Isoleucine--tRNA ligase n=2 Tax=Vitrella brassicaf... [more]
A0A7S0LI09_9EUKA4.290e-2374.19Isoleucine--tRNA ligase (Fragment) n=1 Tax=Coccoli... [more]
A0A3N5IE16_9CHRO7.160e-2372.58Isoleucine--tRNA ligase (Fragment) n=1 Tax=Chrooco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009008Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainGENE3D3.90.740.10coord: 1..25
e-value: 8.8E-19
score: 69.2
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 26..62
e-value: 8.8E-19
score: 69.2
IPR002300Aminoacyl-tRNA synthetase, class IaPFAMPF00133tRNA-synt_1coord: 3..61
e-value: 3.1E-13
score: 48.9
NoneNo IPR availablePANTHERPTHR42765FAMILY NOT NAMEDcoord: 2..62
NoneNo IPR availablePANTHERPTHR42765:SF3coord: 2..62
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 19..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig128475contigH-elongata_contig128475:1407..1595 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig128475.2093.1mRNA_H-elongata_contig128475.2093.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig128475 1407..1595 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig128475.2093.1 ID=prot_H-elongata_contig128475.2093.1|Name=mRNA_H-elongata_contig128475.2093.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
EGNEEVLLALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDR
FRDAALGAIDEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009008Val/Leu/Ile-tRNA-synth_edit
IPR014729Rossmann-like_a/b/a_fold
IPR002300aa-tRNA-synth_Ia