prot_H-elongata_contig128327.2087.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig128327.2087.1
Unique Nameprot_H-elongata_contig128327.2087.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length78
Homology
BLAST of mRNA_H-elongata_contig128327.2087.1 vs. uniprot
Match: D8LNT0_ECTSI (Ribosomal protein L15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNT0_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 8.360e-42
Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0
Query:    1 MVRVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFANMRVLNSYWINQDATFKYFEVGTKTP 77
            MVRVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKF NMRVLNSYW+NQDATFKY+EV T  P
Sbjct:   61 MVRVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFTNMRVLNSYWVNQDATFKYYEVITVDP 137          
BLAST of mRNA_H-elongata_contig128327.2087.1 vs. uniprot
Match: A0A485KI84_9STRA (Ribosomal protein L15 n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KI84_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.340e-36
Identity = 60/71 (84.51%), Postives = 68/71 (95.77%), Query Frame = 0
Query:    2 VRVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFANMRVLNSYWINQDATFKYFEV 72
            VRVAVRRGGRKRPN+KGIVYGKPKHHGIN++K VRNLRS+AEER GA+F N+RVLNSYW+NQDAT+KYFEV
Sbjct:   62 VRVAVRRGGRKRPNSKGIVYGKPKHHGINQLKDVRNLRSIAEERAGARFTNLRVLNSYWVNQDATYKYFEV 132          
BLAST of mRNA_H-elongata_contig128327.2087.1 vs. uniprot
Match: F0WIA3_9STRA (Ribosomal protein L15 n=2 Tax=Albugo TaxID=65356 RepID=F0WIA3_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.960e-35
Identity = 60/72 (83.33%), Postives = 67/72 (93.06%), Query Frame = 0
Query:    1 MVRVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFANMRVLNSYWINQDATFKYFEV 72
            +VR AVRRGGRKRPN+KGIVYGKPKHHGIN++K  RNLRSVAEER GA+F N+RVLNSYWINQDAT+KYFEV
Sbjct:   61 IVRAAVRRGGRKRPNSKGIVYGKPKHHGINQLKFARNLRSVAEERAGARFTNLRVLNSYWINQDATYKYFEV 132          
BLAST of mRNA_H-elongata_contig128327.2087.1 vs. uniprot
Match: K3WHU9_GLOUD (Ribosomal protein L15 n=26 Tax=Oomycota TaxID=4762 RepID=K3WHU9_GLOUD)

HSP 1 Score: 125 bits (314), Expect = 1.540e-34
Identity = 59/72 (81.94%), Postives = 66/72 (91.67%), Query Frame = 0
Query:    1 MVRVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFANMRVLNSYWINQDATFKYFEV 72
            + RVAVRRGGRKRPN+KGIVYGKPKHHGIN++K  RNLRSVAEER G KF N+RVLNSYW+NQDAT+KYFEV
Sbjct:   61 VARVAVRRGGRKRPNSKGIVYGKPKHHGINQLKFERNLRSVAEERAGNKFTNLRVLNSYWVNQDATYKYFEV 132          
BLAST of mRNA_H-elongata_contig128327.2087.1 vs. uniprot
Match: A0A2D4BT83_PYTIN (Ribosomal protein L15 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BT83_PYTIN)

HSP 1 Score: 122 bits (305), Expect = 3.520e-33
Identity = 57/72 (79.17%), Postives = 65/72 (90.28%), Query Frame = 0
Query:    1 MVRVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFANMRVLNSYWINQDATFKYFEV 72
            +VR AVRRGGRKR NAKGIVYGKP H GIN++KA RNLRS+AEER G KFAN+RVLNSYW+NQDAT+KYFE+
Sbjct:   61 VVRAAVRRGGRKRQNAKGIVYGKPSHQGINQLKAERNLRSIAEERAGRKFANLRVLNSYWVNQDATYKYFEI 132          
BLAST of mRNA_H-elongata_contig128327.2087.1 vs. uniprot
Match: A0A7S1UIX1_9STRA (Ribosomal protein L15 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIX1_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.410e-32
Identity = 57/72 (79.17%), Postives = 65/72 (90.28%), Query Frame = 0
Query:    1 MVRVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFANMRVLNSYWINQDATFKYFEV 72
            +VRVAVRRGGRKRPN KGIV+GKPKHHGIN +K  RNL+SVAEER G K AN+RVLNSYW+NQDAT+KY+EV
Sbjct:   61 IVRVAVRRGGRKRPNNKGIVFGKPKHHGINHLKFARNLQSVAEERAGRKAANLRVLNSYWVNQDATYKYYEV 132          
BLAST of mRNA_H-elongata_contig128327.2087.1 vs. uniprot
Match: A0A482T0Y2_9ARCH (50S ribosomal protein L15e n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0Y2_9ARCH)

HSP 1 Score: 117 bits (292), Expect = 1.850e-31
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    3 RVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFANMRVLNSYWINQDATFKYFEV 72
            RVAVRRGGRKRPN KGIVYGKPK+ GIN++K VRNLRSVAEER G   AN+RVLNSYWINQDAT+KYFEV
Sbjct:   42 RVAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVCANLRVLNSYWINQDATYKYFEV 111          
BLAST of mRNA_H-elongata_contig128327.2087.1 vs. uniprot
Match: A0A7S2UVW3_9STRA (Ribosomal protein L15 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVW3_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.280e-31
Identity = 55/70 (78.57%), Postives = 64/70 (91.43%), Query Frame = 0
Query:    3 RVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFANMRVLNSYWINQDATFKYFEV 72
            RVAVRRGGRKRPN KGIVYGKPKH GIN++K VRNL+SVAE+R G + AN+RVLNSYW+NQDAT+KY+EV
Sbjct:   63 RVAVRRGGRKRPNPKGIVYGKPKHQGINQLKFVRNLQSVAEQRAGKRCANLRVLNSYWVNQDATYKYYEV 132          
BLAST of mRNA_H-elongata_contig128327.2087.1 vs. uniprot
Match: A0A835ZF84_9STRA (Ribosomal protein L15 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF84_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.230e-31
Identity = 57/70 (81.43%), Postives = 64/70 (91.43%), Query Frame = 0
Query:    3 RVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFANMRVLNSYWINQDATFKYFEV 72
            RVAVRRGGRKRPN KGIVYGKPK+ GI ++K VR+LRSVAEER GAK ANMRVLNSYW+NQDAT+KY+EV
Sbjct:   63 RVAVRRGGRKRPNYKGIVYGKPKNQGITQLKFVRSLRSVAEERAGAKCANMRVLNSYWVNQDATYKYYEV 132          
BLAST of mRNA_H-elongata_contig128327.2087.1 vs. uniprot
Match: F0Y8J7_AURAN (Ribosomal protein L15 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8J7_AURAN)

HSP 1 Score: 116 bits (291), Expect = 4.570e-31
Identity = 56/75 (74.67%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    3 RVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFANMRVLNSYWINQDATFKYFEVGTKTP 77
            R AVRRGGRKRPN KGIVYGKPKH GIN++K  RNL+SVAEERVG K  N+RVLNSYW+NQDAT+KY+EV    P
Sbjct:   63 RSAVRRGGRKRPNGKGIVYGKPKHQGINQLKFARNLQSVAEERVGKKCGNLRVLNSYWVNQDATYKYYEVIAVDP 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig128327.2087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNT0_ECTSI8.360e-4292.21Ribosomal protein L15 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A485KI84_9STRA3.340e-3684.51Ribosomal protein L15 n=7 Tax=Saprolegniaceae TaxI... [more]
F0WIA3_9STRA1.960e-3583.33Ribosomal protein L15 n=2 Tax=Albugo TaxID=65356 R... [more]
K3WHU9_GLOUD1.540e-3481.94Ribosomal protein L15 n=26 Tax=Oomycota TaxID=4762... [more]
A0A2D4BT83_PYTIN3.520e-3379.17Ribosomal protein L15 n=1 Tax=Pythium insidiosum T... [more]
A0A7S1UIX1_9STRA1.410e-3279.17Ribosomal protein L15 n=1 Tax=Phaeomonas parva Tax... [more]
A0A482T0Y2_9ARCH1.850e-3182.8650S ribosomal protein L15e n=1 Tax=archaeon TaxID=... [more]
A0A7S2UVW3_9STRA2.280e-3178.57Ribosomal protein L15 n=1 Tax=Fibrocapsa japonica ... [more]
A0A835ZF84_9STRA3.230e-3181.43Ribosomal protein L15 n=2 Tax=Tribonema minus TaxI... [more]
F0Y8J7_AURAN4.570e-3174.67Ribosomal protein L15 n=1 Tax=Aureococcus anophage... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000439Ribosomal protein L15eSMARTSM01384Ribosomal_L15e_2coord: 1..75
e-value: 8.8E-8
score: 7.6
IPR000439Ribosomal protein L15ePFAMPF00827Ribosomal_L15ecoord: 2..72
e-value: 5.9E-30
score: 104.4
IPR000439Ribosomal protein L15ePANTHERPTHR11847RIBOSOMAL PROTEIN L15coord: 2..72
IPR024794Ribosomal protein L15e core domain superfamilyGENE3D3.40.1120.10coord: 1..77
e-value: 1.2E-33
score: 118.4
NoneNo IPR availablePANTHERPTHR11847:SF460S RIBOSOMAL PROTEIN L15coord: 2..72
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 2..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig128327contigH-elongata_contig128327:119..861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig128327.2087.1mRNA_H-elongata_contig128327.2087.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig128327 119..882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig128327.2087.1 ID=prot_H-elongata_contig128327.2087.1|Name=mRNA_H-elongata_contig128327.2087.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp
MVRVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKF
ANMRVLNSYWINQDATFKYFEVGTKTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000439Ribosomal_L15e
IPR024794Rbsml_L15e_core_dom_sf
IPR012678Ribosomal_L23/L15e_core_dom_sf