prot_H-elongata_contig12805.2068.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12805.2068.1
Unique Nameprot_H-elongata_contig12805.2068.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length944
Homology
BLAST of mRNA_H-elongata_contig12805.2068.1 vs. uniprot
Match: D7FJS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS0_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 7.460e-80
Identity = 318/990 (32.12%), Postives = 438/990 (44.24%), Query Frame = 0
Query:   15 KKKTGLRSTSKAPLHKIGAVTATGSGWLISGKLGVSNEEGSGNEGSGGGVEARRDESTSVKKTKRGVKKVNAIAIPTASGPGGWLASGTLGVPVDDEIEEDVGERVGTARGPVMLSEETQTKEDNEEIVRHGKESKLPPWAKPWTPPPESNVAVDPA-------PPQNEEDKEQDTTPATTPDWILASLGPGDDHAPAMIIADGGLGSKGGGLD-WLAQVVDPASASVCDTRGFLPAVTVASGSDWLHKAIVGGG-PKLKNKSSNPH--------ASIAPRDISWMAKMKRRSSMDLEDPCVEELVVEAKAKAVPGGWMQSGTLGAPDSVDEEKALEEARAASSLHSNVKSSGEVSIGRRPSLAGGLPSWAPARQEQTAVPDDTTFDTIXXXXXXXXXXXXXXXSGIDTETSQGLSXXXXXXXXXXKSVPSRMGE-----------------SGAQSTREDTKYEGCRTEKQQAQLAAIPE---WLAEAAGG----ASTKVLPGTV-YDSHDRGGGLNWLEAVINPNMKAAATPSAAKRGWSSMAPGGWIS-GKKGLAV---AEEDENSKHSETGMATKKAIKKMTPEGKTSIDARGPAGQVAGWLAVAISLGKLGVSTDASYEEYGGQSGEDVGGTKVATLSTQWEDGVI----GDTGRAPVSTLPPWAAKWKPPSP--DTLPKVEEKSTVEA-EAKPESSE--LDWIKNEMPGRPAKTSIGDSTSPGETVAA---GLGTTTQDNTGLDWLKKITTPG-GSSPHASVASPGYCLGAVKKKTGLHSTSKAPLHKIGAVTVTGSGWLTSGKLGVSN-EEGIDDGGSGCGVEDRRDESTSVRKPKRGVKKVSVIAIPTASGPGGWLASGTLGVPVHDDFEEDAGGGVGSTRGPIMLSEETQTEEDEEGIVKHGKESKPPPWAKPWTPPPESNVAVDPAPPQNEEDKEQVTIPATTPDWILASLGPGDDHAPAMIIADGGVGSKEGGLDWLAQ 944
            K+K    +T+ A   K  AV A   GWL S KLGVS EE S ++   G    R  +S   KK  RG       ++  AS             P  +          G    PV+++ ETQT++D E +   G   KLPPWAKP+ PPP+ +VA D         PP+ EE     T  + TPDWILASLG  D  A       GG+ + GGG + WL+Q  +    +       +P     +  DWL +A      PK +  +S P         A++    +SWM ++KR+SSMDL+D  VE  V +AKAKA PGGW+Q G LGAPD++ EE  LE+ARAAS L S    S   S GRRPSL+GG P WAPA++E  AV D  +  T     XXXXXXXXXXX      T+              +      GE                 +G  S  E T   G   ++Q  + +   +   WL +AA      A+   +P T   DS +   G +WL AV   + +A  +P+  +    + APGGW+S GK GL     +++D+  K S +G   K          K    ARG                           E G     D  G  V T+ TQ +D +     G   R     LPPWA  + PP P  + +P    + T+E  E +P  S     W+   + G PA     D+      + A   G+G  +  N GL WL +  +    ++  AS + P +   A  +    H+ S     +    +    GW++SGKLGVS  ++G D+  +G     + D  ++  KP++  K+ S  ++  A GP GWL+SG LGVP  D+ +ED G   G    P+M + ETQTEE+ E   K     K P                         ++E  T PAT PDWILASLGP  + A A     G  G      DWL Q
Sbjct:  765 KRKPHATATAAA---KAAAVPAAPGGWLSSVKLGVSTEEDS-DQDDAGKTAGRSTKSKKKKKQARG-------SVSVASXXXXXXXXXXXXXP--EXXXXXXXXXGGGDSQPVLVTMETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDVAPDSTADSTAEIPPEKEE-----TDASATPDWILASLG--DQDADGF---SGGVPASGGGSNNWLSQAAEQEPGAGASD---MPNTGDTNAPDWLQQAAAPNAKPKHRQAASMPQQRPGIARKAAVPASPLSWMKQVKRQSSMDLDDQTVETTVAQAKAKAAPGGWLQIGVLGAPDALAEENELEQARAASPLTSTGPESRSRSEGRRPSLSGGPPPWAPAKEEG-AVGDSGSTTTSTHDVXXXXXXXXXXXXXXXXPTAVAAEAETTEQKEGSEEAAKEKGEPATSGVRVSDWLAAAATTGTASGEESTNALGEERDQQDGEASGGSDGLSWLTQAADSHKPSAAASGIPSTAGVDSSEGDAGADWL-AVAKSSGQAKRSPAVKRPSVGAAAPGGWMSSGKLGLPAGDGSDDDQAGKTSGSGGVAK---------AKXXXKARGSVSGTXXXXXXXXXXXXXXXXXXXXXXEEGSGGDNDRRGAAV-TIETQTDDDIEAATRGAAERGSTRKLPPWAKPYVPPDPIPEVVPDTAAELTIEKQELEPAGSGGVPSWLAA-VAGAPADEKHSDALGQERALEADEGGVGQASGGNDGLGWLTEAASKDTAAATPASTSVPDWLGDATSRGMTKHNKSSTAAKRASIKSAAPGGWMSSGKLGVSTGDDGSDEDQAG-----KTDRGSA--KPRKKKKQPSRGSVSAAGGPAGWLSSGALGVPAQDESDEDGGDSDGGR--PLMATTETQTEENIEEATKTANGPKLPXXXXXXXXXXXXXXXXXXXXXXXXXEQEHDT-PAT-PDWILASLGPDAEGAAAAPAPGGSPG------DWLVQ 1698          
BLAST of mRNA_H-elongata_contig12805.2068.1 vs. uniprot
Match: A0A6H5KKG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG6_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 2.020e-42
Identity = 133/346 (38.44%), Postives = 173/346 (50.00%), Query Frame = 0
Query:    5 DWLTSTITCKKKKTGLRSTSKAPLHKIGAVTATGSGWLISGKLGVSNEEGSGNEGSGGGVEARRDESTSVKKTKRGVKKVNAIAIPTASGPGGWLASGTLGVPVDDEIEEDVGERVGTARGPVMLSEETQTKEDNEEIVRHGKESKLPPWAKPWTPPPESNVAVDPAPPQNEEDKEQDTTPATTPDWILASLGPGDDHAPAMIIADGGLGSKGGGLDWLAQVVDPASASVCDTRGFLPAVTVASGSDWLHKAIVGGGPKLKNK-----SSNP---HASIAPRDISWMAKMKRRSSMDLEDPCVEELVVEAKAKAVPGGWMQSGTLGAPDSVDEEKALEEARAASSL 342
            DWL    +    K   RST+ A    IG+  A   GW+ SGKLG++  + S +E   G     + +  S K   +  K+    ++P A GP GWL+SG LGVP   E +E+ G+  G    P+M + ETQT+++ E   +     KLPPWAKPWTP P                         TPDWILASL P  + A A     G  G      DW  Q  + A      T G       ++G DWL +A      K  N+     +  P     + A   +SWM+ MKRRSSMDL D  VEE + +AKAK +PGGW+Q G LGAPD+V+E  ALEEARAASSL
Sbjct:  523 DWLAGAKSRGTTKHNKRSTA-AKRASIGS--AAPGGWMSSGKLGLATGDDSSDEDQAG-----KTDRGSAKPRMKKKKQQRRGSVPAAGGPAGWLSSGALGVPAQYESDENGGDSDGGR--PLMATTETQTEDNIEAATKTANGPKLPPWAKPWTPXPPXXXXXXXX--XXXXXXXXXXXXPGTPDWILASLDPDTEGAAAAPAPGGSPG------DWHVQE-NQAGGGPAGTGGG------STGPDWLQQATAASTGKPANRWRGAATQRPGGGRKAAAQSPLSWMSSMKRRSSMDLNDQGVEEAIAQAKAKTIPGGWLQIGALGAPDAVEEANALEEARAASSL 843          
BLAST of mRNA_H-elongata_contig12805.2068.1 vs. uniprot
Match: A0A6H5KVL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL2_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.380e-36
Identity = 130/354 (36.72%), Postives = 177/354 (50.00%), Query Frame = 0
Query:    5 DWLTSTITCKKKKTGLRSTSKAPLHKIGAVTATGSGWLISGKLGVSNEEGSGNEGSGGGVEARRDESTSVKKTKRGVKKVNAI-AIPTASGPGGWLASGTLGVPVDDEIEEDVGERVGTARGPVMLSEETQTKEDNEEIVRHGKESKLPPWAKPWTPPPESNVAVDPAPPQNEED-------KEQDTTPATTPDWILASLGPGDDHAPAMIIADGGLGSKGGGL-DWLAQVVDPASASVCDTRGFLPAVTVASGSDWLHKAIVGGG-PKLKNKSSNPH--------ASIAPRDISWMAKMKRRSSMDLEDPCVEELVVEAKAKAVPGGWMQSGTLGAPDSVDEEKALEEARAAS 340
            DWL    +  + K    +T+ A   K  AV A   GWL SGKLGVS EE   N+    G  A R  ST+ KK     KK  AI A+P A                        G   G    P++++ ETQT++D E +   G   KLPPWAKP+ PPP+ +V      P++  D       ++++T  +  PDWILA+LG  D  A       GG+ + GGG  +WL+   +    +       +P     +  DWL +A      PK +  +S P         A++    +SWM ++KRRSSMDL+DP VE  V +AKAKA PGGW+Q G LGAPD++ EE  LE+ARAAS
Sbjct:  752 DWLAVAKSSGQTKRKPHATATAAA-KAAAVPAAPGGWLSSGKLGVSTEEE--NDQDDAGKTAGR--STTPKK-----KKKQAIGAVPVAXXXXXXXXXXXXXXXXXXXXXXXXG---GGDGQPILVTMETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDVV-----PESTADSXXXKTPEKEETDASAAPDWILAALG--DQDADGF---RGGVPASGGGSKNWLSHAAEQEPGAGASD---MPNTGDTNAPDWLQQAAAPSAKPKDRQAASIPQQRSGIARKAAVPASPLSWMKQVKRRSSMDLDDPTVETTVAQAKAKAAPGGWLQIGALGAPDALAEENELEQARAAS 1079          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12805.2068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJS0_ECTSI7.460e-8032.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKG6_9PHAE2.020e-4238.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVL2_9PHAE2.380e-3636.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12805contigH-elongata_contig12805:1880..8463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12805.2068.1mRNA_H-elongata_contig12805.2068.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12805 1880..8463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12805.2068.1 ID=prot_H-elongata_contig12805.2068.1|Name=mRNA_H-elongata_contig12805.2068.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=944bp
GGRIDWLTSTITCKKKKTGLRSTSKAPLHKIGAVTATGSGWLISGKLGVS
NEEGSGNEGSGGGVEARRDESTSVKKTKRGVKKVNAIAIPTASGPGGWLA
SGTLGVPVDDEIEEDVGERVGTARGPVMLSEETQTKEDNEEIVRHGKESK
LPPWAKPWTPPPESNVAVDPAPPQNEEDKEQDTTPATTPDWILASLGPGD
DHAPAMIIADGGLGSKGGGLDWLAQVVDPASASVCDTRGFLPAVTVASGS
DWLHKAIVGGGPKLKNKSSNPHASIAPRDISWMAKMKRRSSMDLEDPCVE
ELVVEAKAKAVPGGWMQSGTLGAPDSVDEEKALEEARAASSLHSNVKSSG
EVSIGRRPSLAGGLPSWAPARQEQTAVPDDTTFDTIRRPSLSGGMPPWAP
ASGIDTETSQGLSLGGGIPMWAPKSVPSRMGESGAQSTREDTKYEGCRTE
KQQAQLAAIPEWLAEAAGGASTKVLPGTVYDSHDRGGGLNWLEAVINPNM
KAAATPSAAKRGWSSMAPGGWISGKKGLAVAEEDENSKHSETGMATKKAI
KKMTPEGKTSIDARGPAGQVAGWLAVAISLGKLGVSTDASYEEYGGQSGE
DVGGTKVATLSTQWEDGVIGDTGRAPVSTLPPWAAKWKPPSPDTLPKVEE
KSTVEAEAKPESSELDWIKNEMPGRPAKTSIGDSTSPGETVAAGLGTTTQ
DNTGLDWLKKITTPGGSSPHASVASPGYCLGAVKKKTGLHSTSKAPLHKI
GAVTVTGSGWLTSGKLGVSNEEGIDDGGSGCGVEDRRDESTSVRKPKRGV
KKVSVIAIPTASGPGGWLASGTLGVPVHDDFEEDAGGGVGSTRGPIMLSE
ETQTEEDEEGIVKHGKESKPPPWAKPWTPPPESNVAVDPAPPQNEEDKEQ
VTIPATTPDWILASLGPGDDHAPAMIIADGGVGSKEGGLDWLAQ
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