prot_H-elongata_contig127863.2052.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig127863.2052.1
Unique Nameprot_H-elongata_contig127863.2052.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length38
Homology
BLAST of mRNA_H-elongata_contig127863.2052.1 vs. uniprot
Match: D7G1I5_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I5_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.780e-12
Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 0
Query:    1 MVFISGDGGGAGSRLTQDVGNILSQLPVTVEALTGVDI 38
            MVFI+G+GGGAGSRLTQDVGNIL+QLP TVEALTGVDI
Sbjct:  366 MVFIAGEGGGAGSRLTQDVGNILAQLPETVEALTGVDI 403          
BLAST of mRNA_H-elongata_contig127863.2052.1 vs. uniprot
Match: D7G1I4_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I4_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 8.560e-12
Identity = 33/38 (86.84%), Postives = 37/38 (97.37%), Query Frame = 0
Query:    1 MVFISGDGGGAGSRLTQDVGNILSQLPVTVEALTGVDI 38
            MVFI+G+GGGAGSRLTQDVG+IL+QLP TVEALTGVDI
Sbjct:  388 MVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDI 425          
BLAST of mRNA_H-elongata_contig127863.2052.1 vs. uniprot
Match: A0A6H5K3X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3X4_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.210e-11
Identity = 31/35 (88.57%), Postives = 34/35 (97.14%), Query Frame = 0
Query:    1 MVFISGDGGGAGSRLTQDVGNILSQLPVTVEALTG 35
            MVFI+GDGGGAGSRLTQDVGNIL+QLP TV+ALTG
Sbjct:  139 MVFIAGDGGGAGSRLTQDVGNILAQLPETVQALTG 173          
BLAST of mRNA_H-elongata_contig127863.2052.1 vs. uniprot
Match: A0A535IAW1_9CHLR (Flotillin family protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535IAW1_9CHLR)

HSP 1 Score: 49.7 bits (117), Expect = 1.640e-6
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 MVFISGDGGGAG---SRLTQDVGNILSQLPVTVEALTGVDI 38
            ++  +GDG G G   SRLTQD+ NI+SQ+P TVEALTGVD+
Sbjct:   52 VIISNGDGNGHGAGASRLTQDITNIISQVPATVEALTGVDV 92          
BLAST of mRNA_H-elongata_contig127863.2052.1 vs. uniprot
Match: A0A7C7QQR8_9CHLR (Flotillin family protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7QQR8_9CHLR)

HSP 1 Score: 48.9 bits (115), Expect = 3.150e-6
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    1 MVFISGDGGGAGSRLTQDVGNILSQLPVTVEALTGVDI 38
            ++   GD G   SR+TQDV NI++Q+P TVEALTGVD+
Sbjct:   48 IINAGGDSGAGASRITQDVANIIAQVPATVEALTGVDL 85          
BLAST of mRNA_H-elongata_contig127863.2052.1 vs. uniprot
Match: A0A1F8QSQ8_9CHLR (Flotillin n=1 Tax=Chloroflexi bacterium RBG_16_56_8 TaxID=1797650 RepID=A0A1F8QSQ8_9CHLR)

HSP 1 Score: 47.0 bits (110), Expect = 7.300e-5
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 MVFIS--GDGGGAG-SRLTQDVGNILSQLPVTVEALTGVDI 38
            +V IS  GDG GAG S+++QD+ NI++Q+P TVEALTGVD+
Sbjct:  448 IVIISNGGDGSGAGASKVSQDIANIIAQVPATVEALTGVDL 488          
BLAST of mRNA_H-elongata_contig127863.2052.1 vs. uniprot
Match: A0A3M2AF75_9CHLR (Flotillin family protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M2AF75_9CHLR)

HSP 1 Score: 47.0 bits (110), Expect = 7.310e-5
Identity = 23/39 (58.97%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 MVFISGDGGGAG-SRLTQDVGNILSQLPVTVEALTGVDI 38
            +V +S  G GAG SR+TQD+ NI++Q+P TVEALTG+D+
Sbjct:  350 IVVVSNGGDGAGASRITQDITNIMAQVPATVEALTGMDL 388          
BLAST of mRNA_H-elongata_contig127863.2052.1 vs. uniprot
Match: UPI001AD29B91 (Inner membrane protein YqiK n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI001AD29B91)

HSP 1 Score: 46.6 bits (109), Expect = 9.980e-5
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    7 DGGGAG-SRLTQDVGNILSQLPVTVEALTGVDI 38
            DG GAG S+++QDV NI+SQ+P TVEALTGVDI
Sbjct:  457 DGSGAGASKVSQDVANIISQVPATVEALTGVDI 489          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127863.2052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G1I5_ECTSI1.780e-1289.47PHB domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G1I4_ECTSI8.560e-1286.84PHB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K3X4_9PHAE1.210e-1188.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A535IAW1_9CHLR1.640e-660.98Flotillin family protein (Fragment) n=1 Tax=Chloro... [more]
A0A7C7QQR8_9CHLR3.150e-657.89Flotillin family protein n=1 Tax=Anaerolineae bact... [more]
A0A1F8QSQ8_9CHLR7.300e-560.98Flotillin n=1 Tax=Chloroflexi bacterium RBG_16_56_... [more]
A0A3M2AF75_9CHLR7.310e-558.97Flotillin family protein (Fragment) n=1 Tax=Chloro... [more]
UPI001AD29B919.980e-572.73Inner membrane protein YqiK n=1 Tax=Anaerolineae b... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig127863contigH-elongata_contig127863:468..581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig127863.2052.1mRNA_H-elongata_contig127863.2052.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig127863 462..581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig127863.2052.1 ID=prot_H-elongata_contig127863.2052.1|Name=mRNA_H-elongata_contig127863.2052.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=38bp
MVFISGDGGGAGSRLTQDVGNILSQLPVTVEALTGVDI
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