prot_H-elongata_contig127862.2051.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig127862.2051.1
Unique Nameprot_H-elongata_contig127862.2051.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
BLAST of mRNA_H-elongata_contig127862.2051.1 vs. uniprot
Match: A0A6H5K085_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K085_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 2.320e-87
Identity = 145/168 (86.31%), Postives = 147/168 (87.50%), Query Frame = 0
Query:    1 QDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVCTLDEVERCVWNEVVVGIEFMDLYSHLIPVYHLEPIEKITDAYLAQYLWYEADKRHLFPNWIKVGFSSP 168
            +DGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEV                GIEFMDLYSHLIPVYHLEP+EKITDAYL QYLWYEADKRHLFPNWIK   S P
Sbjct:  903 KDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEV----------------GIEFMDLYSHLIPVYHLEPLEKITDAYLDQYLWYEADKRHLFPNWIKPSDSEP 1054          
BLAST of mRNA_H-elongata_contig127862.2051.1 vs. uniprot
Match: A0A6J8F080_MYTCO (PRPF8 n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8F080_MYTCO)

HSP 1 Score: 261 bits (666), Expect = 6.330e-85
Identity = 132/168 (78.57%), Postives = 139/168 (82.74%), Query Frame = 0
Query:    1 QDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVCTLDEVERCVWNEVVVGIEFMDLYSHLIPVYHLEPIEKITDAYLAQYLWYEADKRHLFPNWIKVGFSSP 168
            +DGPY++ EEAVAIYTTTVHWLESR+FSPIPFPPLSYK+DTKLLILALERLKE YSV SRLN  QREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEV                GIEFMDLYSHLIPVY +EP+EKITDAYL QYLWYEADKR LFP WIK   S P
Sbjct:  147 KDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEV----------------GIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADSEP 298          
BLAST of mRNA_H-elongata_contig127862.2051.1 vs. uniprot
Match: UPI0007DA6E29 (pre-mRNA-processing-splicing factor 8-like n=1 Tax=Cricetulus griseus TaxID=10029 RepID=UPI0007DA6E29)

HSP 1 Score: 259 bits (661), Expect = 6.180e-84
Identity = 129/168 (76.79%), Postives = 139/168 (82.74%), Query Frame = 0
Query:    1 QDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVCTLDEVERCVWNEVVVGIEFMDLYSHLIPVYHLEPIEKITDAYLAQYLWYEADKRHLFPNWIKVGFSSP 168
            +DGPY++ EEAVA+YTTTVHWLESR+FSPIPFPPLSYK+DTKLLILALERLKE YSV SRLN  QREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEV                GIEFMDLYSHL+PVY +EP+EKITDAYL QYLWYEADKR LFP WIK   + P
Sbjct:  107 KDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEV----------------GIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEP 258          
BLAST of mRNA_H-elongata_contig127862.2051.1 vs. uniprot
Match: A0A314ZAI9_PRUYE (Uncharacterized protein n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314ZAI9_PRUYE)

HSP 1 Score: 268 bits (685), Expect = 6.790e-83
Identity = 134/168 (79.76%), Postives = 142/168 (84.52%), Query Frame = 0
Query:    1 QDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVCTLDEVERCVWNEVVVGIEFMDLYSHLIPVYHLEPIEKITDAYLAQYLWYEADKRHLFPNWIKVGFSSP 168
            +DGPYV+PEEAVAIYTTTVHWLESRKFSPIPFPPLSYK+DTKLLILALERLKE+YSV  RLN +QREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEV                GIEFMDLYS+LIPVY +EP+EKITDAYL QYLWYE DKRHLFPNWIK   S P
Sbjct:  457 KDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEV----------------GIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEP 608          
BLAST of mRNA_H-elongata_contig127862.2051.1 vs. uniprot
Match: A0A3L6V125_9STRA (PROCN domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V125_9STRA)

HSP 1 Score: 265 bits (677), Expect = 1.300e-82
Identity = 131/168 (77.98%), Postives = 141/168 (83.93%), Query Frame = 0
Query:    1 QDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVCTLDEVERCVWNEVVVGIEFMDLYSHLIPVYHLEPIEKITDAYLAQYLWYEADKRHLFPNWIKVGFSSP 168
            +DGPYVS EEAVA+YTTTVHWLESRKF+PIPFPPLSYK+DTKLLILALERLKENYS N+RLN  QREELGLIEQAYDNPHEALSRIKRHLLTQRAFKE+                 IEFMDLYSHLIPVY +EP+EKITDAYL QYLWYEADKRHLFP+WIK   + P
Sbjct:  467 KDGPYVSAEEAVAVYTTTVHWLESRKFAPIPFPPLSYKHDTKLLILALERLKENYSANNRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEM----------------SIEFMDLYSHLIPVYEIEPLEKITDAYLDQYLWYEADKRHLFPSWIKPSDAEP 618          
BLAST of mRNA_H-elongata_contig127862.2051.1 vs. uniprot
Match: A0A7S1T0K3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0K3_9CHLO)

HSP 1 Score: 255 bits (651), Expect = 2.590e-82
Identity = 127/168 (75.60%), Postives = 138/168 (82.14%), Query Frame = 0
Query:    1 QDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVCTLDEVERCVWNEVVVGIEFMDLYSHLIPVYHLEPIEKITDAYLAQYLWYEADKRHLFPNWIKVGFSSP 168
            +DGPYV+PEEAVAIYTTTVHWLESRKFSPIPFPPLSYK+DTKLLILALERLKE Y+V  RLN  QREELGL+EQAYDNPHEALSRIKRHLLTQRAFKEV                 IEFMDLY+HLIPV  +EP+EKI+D+YL QYLWYEADKRHLFPNW+K     P
Sbjct:   59 KDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKEQYTVAVRLNQQQREELGLVEQAYDNPHEALSRIKRHLLTQRAFKEV----------------SIEFMDLYTHLIPVVVIEPLEKISDSYLDQYLWYEADKRHLFPNWVKPADLEP 210          
BLAST of mRNA_H-elongata_contig127862.2051.1 vs. uniprot
Match: F0W3E9_9STRA (PREDICTED: similar to CG8877PA putative n=2 Tax=Oomycota TaxID=4762 RepID=F0W3E9_9STRA)

HSP 1 Score: 273 bits (699), Expect = 5.570e-82
Identity = 136/168 (80.95%), Postives = 144/168 (85.71%), Query Frame = 0
Query:    1 QDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVCTLDEVERCVWNEVVVGIEFMDLYSHLIPVYHLEPIEKITDAYLAQYLWYEADKRHLFPNWIKVGFSSP 168
            +DGPYVSPEEAVAIYTTTVHWLESRKF+PIPFPPLSYK+DTKLLILALERLKENY+VNSRLN   REELGLIEQAYDNPHEALSRIKRHLLTQRAFKEV                GI+FMDLYSHLIPVY +EP+EKITDAYL QYLWYEADKRHLFP+WIK G S P
Sbjct:  816 KDGPYVSPEEAVAIYTTTVHWLESRKFAPIPFPPLSYKHDTKLLILALERLKENYAVNSRLNQSHREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEV----------------GIDFMDLYSHLIPVYDIEPLEKITDAYLDQYLWYEADKRHLFPSWIKPGDSEP 967          
BLAST of mRNA_H-elongata_contig127862.2051.1 vs. uniprot
Match: A0A7J6VC43_THATH (Pre-mrna-processing-splicing factor n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6VC43_THATH)

HSP 1 Score: 259 bits (661), Expect = 5.620e-82
Identity = 127/168 (75.60%), Postives = 141/168 (83.93%), Query Frame = 0
Query:    1 QDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVCTLDEVERCVWNEVVVGIEFMDLYSHLIPVYHLEPIEKITDAYLAQYLWYEADKRHLFPNWIKVGFSSP 168
            +DGPY++PEEAVA+YTTTV WLE+RKFSPIPFPPLSYK+DTKLLILALERLKE+YSV  RLN +QREELGLIEQAYDNPHEALSRIKRHLLTQR+FK+V                GIEFMDLY++LIPVY +EP+EKITDAYL QYLWYE DKRHLFPNWIK   S P
Sbjct:  258 KDGPYITPEEAVAMYTTTVRWLETRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQRSFKDV----------------GIEFMDLYNYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKSADSEP 409          
BLAST of mRNA_H-elongata_contig127862.2051.1 vs. uniprot
Match: F0YIE3_AURAN (MPN domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIE3_AURAN)

HSP 1 Score: 271 bits (694), Expect = 2.620e-81
Identity = 135/168 (80.36%), Postives = 142/168 (84.52%), Query Frame = 0
Query:    1 QDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVCTLDEVERCVWNEVVVGIEFMDLYSHLIPVYHLEPIEKITDAYLAQYLWYEADKRHLFPNWIKVGFSSP 168
            +DGPYVS EEAVAIYTTTVHWLESRKFSPIPFPPLSYK+DTKLLILALERLKENY +NSRLN  QREELGLIEQAYDNPHEALSR+KRHLLTQRAFKEV                GI+FMDLYSHLIPVY +EP+EKITDAYL QYLWYEADKRHLFPNWIK   S P
Sbjct:  833 KDGPYVSAEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKENYGINSRLNQNQREELGLIEQAYDNPHEALSRVKRHLLTQRAFKEV----------------GIQFMDLYSHLIPVYEVEPLEKITDAYLDQYLWYEADKRHLFPNWIKPADSEP 984          
BLAST of mRNA_H-elongata_contig127862.2051.1 vs. uniprot
Match: A0A8J2WY90_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY90_9STRA)

HSP 1 Score: 271 bits (693), Expect = 3.530e-81
Identity = 134/168 (79.76%), Postives = 142/168 (84.52%), Query Frame = 0
Query:    1 QDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALERLKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVCTLDEVERCVWNEVVVGIEFMDLYSHLIPVYHLEPIEKITDAYLAQYLWYEADKRHLFPNWIKVGFSSP 168
            +DGPYVS EEAVAIYTTTVHWLESRKFSPIPFPPLSYK+DTKLLILALERLKENY +NSRLN  QREELGLIEQAYDNPHEALSR+KRHLLTQRAFKEV                G++FMDLYSHLIPVY +EP+EKITDAYL QYLWYEADKRHLFPNWIK   S P
Sbjct:  308 KDGPYVSAEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKENYGINSRLNQNQREELGLIEQAYDNPHEALSRVKRHLLTQRAFKEV----------------GVQFMDLYSHLIPVYEVEPLEKITDAYLDQYLWYEADKRHLFPNWIKPADSEP 459          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127862.2051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K085_9PHAE2.320e-8786.31MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6J8F080_MYTCO6.330e-8578.57PRPF8 n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A... [more]
UPI0007DA6E296.180e-8476.79pre-mRNA-processing-splicing factor 8-like n=1 Tax... [more]
A0A314ZAI9_PRUYE6.790e-8379.76Uncharacterized protein n=1 Tax=Prunus yedoensis v... [more]
A0A3L6V125_9STRA1.300e-8277.98PROCN domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S1T0K3_9CHLO2.590e-8275.60Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
F0W3E9_9STRA5.570e-8280.95PREDICTED: similar to CG8877PA putative n=2 Tax=Oo... [more]
A0A7J6VC43_THATH5.620e-8275.60Pre-mrna-processing-splicing factor n=1 Tax=Thalic... [more]
F0YIE3_AURAN2.620e-8180.36MPN domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A8J2WY90_9STRA3.530e-8179.76Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027652Pre-mRNA-processing-splicing factor 8PANTHERPTHR11140PRE-MRNA SPLICING FACTOR PRP8coord: 1..167
NoneNo IPR availablePANTHERPTHR11140:SF1coord: 1..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig127862contigH-elongata_contig127862:270..1448 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig127862.2051.1mRNA_H-elongata_contig127862.2051.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig127862 270..1448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig127862.2051.1 ID=prot_H-elongata_contig127862.2051.1|Name=mRNA_H-elongata_contig127862.2051.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
QDGPYVSPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKYDTKLLILALER
LKENYSVNSRLNAIQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVC
TLDEVERCVWNEVVVGIEFMDLYSHLIPVYHLEPIEKITDAYLAQYLWYE
ADKRHLFPNWIKVGFSSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027652PRP8