prot_H-elongata_contig12767.2041.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12767.2041.1
Unique Nameprot_H-elongata_contig12767.2041.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length633
Homology
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: D7FKV7_ECTSI (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV7_ECTSI)

HSP 1 Score: 1147 bits (2967), Expect = 0.000e+0
Identity = 568/632 (89.87%), Postives = 590/632 (93.35%), Query Frame = 0
Query:    1 MGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTTVADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDVPRLEVAFYTMKGGAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 632
            MG IA+DGL HPFD+TT LTKGFAF+NF+NPQDAKQA ++LNGWQLDKSH IKV PFEQLARLRSLPE YE PE K FKPRVDPSSWLAD QHRDQFVLRYSEPHPSGK VHEAEVMW EK Q P LCYGGEREKEAGKAW     CELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETY+MTCNFE GDKAIIVWEVLTGQMLRAFPM TTT ADGAASLFRWS DGK+LARKGKDLISIYELPS+RLLDKKSLKAEGVS FEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQ+EGDYLCVKVLRHSKSKKTMYNNFEIFR+RE LVPVETMEKKQ VAAFAWEPAGDRFA+VLGDVP+LEV FYTMKGGAGKNELQE ETL++RPFNHIYWSPMGNICLLAAMG+DVGPHNGRLE YDVENQ+TLKQTEHFRCNYIEWDPSGRY CTAVSQPVTGSHWKAQMDNGYQL+SFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKK+VKNLRKYEK XXXXXXXXXXXX       KI+MK++FRQQVAEM LRL GRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct:   75 MGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAW-----CELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXKIQMKLEFRQQVAEMNLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 701          
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A835YNH6_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH6_9STRA)

HSP 1 Score: 791 bits (2044), Expect = 2.790e-280
Identity = 376/630 (59.68%), Postives = 469/630 (74.44%), Query Frame = 0
Query:    2 GIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTTVADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDN--VLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLG-DVPRLEVAFYTMKGGAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVK 628
            G I E+G+  P D   + + GF FINF   ++A+ AV+ +N +QLDK H   V P+E+L +L S+P+ Y PP    ++PR D  SWLAD  HRDQFV+RYS P   G P HE  V WCE+   P  CYGGEREK  GKAW      EL++ WSPQGTYL + H+PGIALWGGE+FEKQGRF H +VKV+EFSPCE Y++TCNF+T ++A+IVWEV +G +LR FP        G  SLF+WS DG+F+ARKG+D +SIY LPS+ LLDKKSLKA G++ FEWSP  +   LAYWAPEQ N PARVSVVEIPSRK+LRQKNL  VSECRLHWQNEG YLCVKVLRHSK+KKTMYNNFE+FR+ +  VPVE +E + +V AFAWEP GDRFA+V G ++PR+ + FYTMKGGA  NEL E  TL ++P NH+YWSP G   ++AAMGE+ G  NG L  YDVE++  L+++EHFR +Y+EWDPSGRY+CTAV+QP+ GSHWKAQMDNGY+L+SFQGE+F+E  KDNFYQ+ WRPRP SLL+S EKKK+V+NL+KYE+R            AR AM+ K+R K  FR  VA    RL  R  ELV+LR+GYDS DE+++ V++RT EV++SVK
Sbjct:   89 GTIQENGICIPTDAAGE-SLGFMFINFTTAEEARSAVAVINNYQLDKRHQFHVFPYERLDQLASVPDEYAPPPPMEYRPRPDLGSWLADENHRDQFVIRYSMPGVGGTPAHETIVNWCERFAPPTQCYGGEREKAQGKAW-----VELYVTWSPQGTYLASLHIPGIALWGGEQFEKQGRFAHSNVKVIEFSPCENYLLTCNFDTTERAMIVWEVRSGAVLRTFP--ARAFEGGPPSLFKWSPDGRFIARKGRDCVSIYALPSMALLDKKSLKATGIADFEWSPSTSSCALAYWAPEQDNTPARVSVVEIPSRKDLRQKNLFNVSECRLHWQNEGTYLCVKVLRHSKTKKTMYNNFELFRVADPQVPVEMLELRSNVIAFAWEPTGDRFAIVHGTELPRVNITFYTMKGGASGNELAEVVTLEDKPVNHLYWSPQGQFIVMAAMGENTGGTNGYLNFYDVESKTILRESEHFRLSYLEWDPSGRYICTAVNQPIDGSHWKAQMDNGYRLWSFQGEQFYELTKDNFYQVLWRPRPVSLLSSEEKKKVVRNLKKYERRFERADKIASRRKARAAMAGKVRQKQAFRAHVAARRERLLARHHELVELRDGYDSHDEANFFVETRTREVIMSVK 710          
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A6H5KAX0_9PHAE (eIF2A domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX0_9PHAE)

HSP 1 Score: 619 bits (1595), Expect = 1.820e-217
Identity = 320/408 (78.43%), Postives = 341/408 (83.58%), Query Frame = 0
Query:  231 TVADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDVPRLEVAFYTMKGGAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQ------VAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 632
            +V DGAASLFRWS DGK+LARKGKDLISIYELPS+RLLDKKSLKAEGVS FEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQ                                            VAAFAWEPAGDRFA+VLGDVP+LEV FYTMKGGAGKNELQ  ETL++RPFNHIYWSP+GNIC+LAAMG+DVGPHNGRLE YDVENQ+TLKQTEHFRCNYIEWDPSGRY CTAVSQPVTG HWKAQMDNGYQL+SFQGERFHEFKKD+FYQIQWRPRPASLLTSAEKKK+VKNLRKY+KR      XXXXXXAREAM+DKI+MK++FRQQ      VA+M+LRL  RRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct:   11 SVEDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQ--------------------------------------------VAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQVLETLQDRPFNHIYWSPVGNICILAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGGHWKAQMDNGYQLFSFQGERFHEFKKDHFYQIQWRPRPASLLTSAEKKKVVKNLRKYDKRFEKDDRXXXXXXAREAMADKIQMKLEFRQQASGLSRVADMKLRLEARRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 374          
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A8K1FRG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRG0_PYTOL)

HSP 1 Score: 587 bits (1514), Expect = 2.620e-200
Identity = 301/619 (48.63%), Postives = 399/619 (64.46%), Query Frame = 0
Query:   20 TKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDV-PRLEVAFYTMKGGAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 632
            T GFAF+ F     A  AV ++N + LDK H + V  +  L + +  PE +  P+ + F    +  +WL D   RD FVLR+S          E E+ W +K +   L Y G REK  GK W     C  +++WSPQGTYL TFH  GIALWGG+ +EK GRF HK+VK+  FSP E Y++T +    + AII+W+V T +MLRAFP    T     V  G  + F+WS D +F+AR+GKD+IS+YELPS++LLDKKSLKA+GV  F WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+L W   G +L VKV RHSKSKKT++ NFEIFR+ ESLVPVE+ E K  + AF++EP G RFA+V G+   RL V+FY M GGA KNEL    TL ++P +H+YWSP GN  +LA +GE     NG LE +D + + ++   EHF+C ++EWDPSGR V +AV QP+  S++K QMDNG+ L++FQG++  E KKD FYQ  WRPRP +LL+  E K +VKNL+KYEKR                 ++K R   +F   VA        RRQE + L NGYDS+D+  Y+V++R+ + VLS KE +Q
Sbjct:   94 TNGFAFVEFEQDTHANDAVRTINNFALDKRHTLLVNKYTDLEKYQKTPEEFVAPKIEKFVEPKNLKTWLMDSARRDMFVLRHST---------ETEIFWSDKGEVT-LDYDGAREKTNGKQW-----CSQYVLWSPQGTYLATFHPQGIALWGGDNYEKVGRFAHKNVKIAVFSPQENYLVTLSETDTENAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLQWHPNGTFLNVKVTRHSKSKKTLFTNFEIFRVHESLVPVESFEMKDTIVAFSFEPKGSRFAIVHGEGNQRLNVSFYDMNGGAKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGLGEI----NGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVSSAVCQPIDNSYYKFQMDNGFTLWTFQGKKLLEEKKDAFYQFLWRPRPRTLLSDKEYKDVVKNLKKYEKRFNEMDRMKERERIAAEKAEKQRQHQEFVDLVAARAETARARRQEYIALLNGYDSEDDDEYIVETRSYDDVLSEKEEVQ 693          
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A0P1APB3_PLAHL (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB3_PLAHL)

HSP 1 Score: 586 bits (1510), Expect = 1.090e-199
Identity = 301/627 (48.01%), Postives = 404/627 (64.43%), Query Frame = 0
Query:   12 PFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGD-VPRLEVAFYTMKGGA-GKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 631
            PFD + + T GFAFI +     A  AV ++N + LDK H + V  +E + R    PE + PP   SF    +  +WL D   RD FVLR+           E E+ W +K +   L Y G+REK+ GK W     C  +++WSPQG+YL TFH  GIALWGGE++EK GRF HK+VK+  FSP E Y++T +    + AII+W+V T +MLRAFP   +T     V  G  + F+WS D KF+AR+GKD+IS+YELPS++LLDKKSL+AEGV  F WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTM+ NFE+FR+ E LVPVE +E K ++ AFAWEP G RFA V G+   RL V+FY M GG+    E+    TL ++  +H+YWSP+GN  +LA +GE     NG+LE +DV  Q ++   EHF+C ++EWDPSGR V TAV QP+  S++K  MDNGY L++FQG++  E KK+ FYQ  WRPRP +LL+ +E   +VKNL+ +EKR                 +++ R + +F++ +       A RR E + L +GYDS DES Y+V S T + VL +KE +
Sbjct:   87 PFDSSGKTT-GFAFIEYEQEAHANDAVRTINNFALDKRHTMIVNKYEDMERYVKTPEEFIPPTINSFVEPKNLKTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEL-ELDYAGDREKKNGKQW-----CSQYVLWSPQGSYLATFHPQGIALWGGEKYEKVGRFAHKNVKLAVFSPHEKYLITLSETEQEAAIIIWDVQTSKMLRAFPAGKSTGVKGEVVQGLMTPFKWSADDKFVARRGKDVISVYELPSMKLLDKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRVHEQLVPVEMLEMKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSSKEVTLLYTLTDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDVSEQQSITIQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKETFYQFLWRPRPRTLLSESEYNHVVKNLKTFEKRFDQMDRLKERERLAALNAERKREEQEFQELLDRRLAIAAARRAEYIALLDGYDSQDESEYIVQSHTYDDVLEIKEEV 693          
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: G5A2B4_PHYSP (Eukaryotic translation initiation factor 3 subunit B n=7 Tax=Phytophthora TaxID=4783 RepID=G5A2B4_PHYSP)

HSP 1 Score: 581 bits (1498), Expect = 7.040e-198
Identity = 297/619 (47.98%), Postives = 396/619 (63.97%), Query Frame = 0
Query:   20 TKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGD-VPRLEVAFYTMKGGAGK-NELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 631
            T GFAF+ +     A  AV ++N + LDK H + V  +E + R +  P  +  P+   F    +  +WLAD   RD FVLR+           E E+ W +K +   L Y G+REK   K W     C  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK+VK+  FSP E YI+T +    D AII+W+V T +MLRAFP    T     V  G  + F+WS D K++AR+GKD+ISIYELPS++LL+KKSL+AEGV  F WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTMY NFE+FR+ E LVPVE +E K+ + AFAWEP G RFA   G+   RL V+FY M GG+    E+    TL+++  +H+YWSP+GN  +LA +GE     NG+LE +D   Q ++   EHF+C ++EWDPSGR V TAV QP+  S++K  MDNGY L++FQG++  E KKD FYQ  WRPRP +LL+  E   +VKNL+K+EKR                 +++ R + +F++ + +     A RR E V L +GYDS+DES Y+V S T + VL  KE +
Sbjct:   94 TTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERFQKTPAEFAAPKVDKFVEPKNLKTWLADPARRDMFVLRHGS---------ETELFWSDKGEI-ELDYAGDREKLNDKQW-----CSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYILTLSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVEMLEVKESIVAFAWEPKGTRFATAHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRQEQEFQELLEKRLASAAARRAEYVALLDGYDSEDESEYIVQSHTYDDVLETKEEV 693          
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: M4BHP4_HYAAE (Eukaryotic translation initiation factor 3 subunit B n=15 Tax=Peronosporaceae TaxID=4777 RepID=M4BHP4_HYAAE)

HSP 1 Score: 582 bits (1499), Expect = 1.240e-197
Identity = 292/619 (47.17%), Postives = 400/619 (64.62%), Query Frame = 0
Query:   20 TKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDVPR-LEVAFYTMKGGAG-KNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 631
            T GFAF+ +     A  AV ++N + LDK H + V  +E + R    P+ +  P+   F    +  SWL D   RD FVLR+           E E+ W +K +   L Y G+REK  GK W     C  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK VK+  FSP E Y++T +    + AII+W+V T ++LRAFP    T     V  G  + F+WS D K++AR+G D+IS+YELPS++LL+KKSL+AEGV  F WSP D +LAYWAPE  N PARVS+VE+PSR E+RQKNL  VS+C+LHW  +G +LCVKV RHSKSKKTMY NFE+FR++E LVPVE +E K ++ AFAWEP G RFA V G+  + L V+FY M GG+    E+    TL+++  +H+YWSP+GN  +LA +GE     NG+LE +D   Q ++   EHF+C+++EWDPSGR V TAV QP+  S++K  MDNGY L++FQG++  E KKD F+Q  WRPRP +LL+ A+ K +VKNL+K+EKR                 +++ + + +F++ + +  +  AGRR E + L  GYDSDDE+ Y+V   T + VL VKE +
Sbjct:   94 TTGFAFVEYEQEAHANDAVRTINSFALDKRHTMNVNKYEDVERYLKTPDEFVAPKVDKFVEPKNLKSWLTDPSRRDMFVLRHGT---------ETEIFWSDKGEV-ELDYAGDREKTNGKQW-----CMQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKKVKLAMFSPNENYLITVSETEQESAIIIWDVKTSKLLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGTDVISVYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRHEVRQKNLFNVSDCKLHWHPDGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKDNIVAFAWEPKGTRFAAVHGEGQQHLNVSFYDMDGGSNVAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDTTEQQSITVQEHFKCSHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYNLWTFQGKKLLEEKKDTFFQFLWRPRPRTLLSDAQYKNVVKNLKKFEKRFDQMDRFKERERLAAENAERNKKEQEFQELLQKRLITAAGRRAEYLSLLGGYDSDDENEYIVQKHTYDDVLEVKEEV 693          
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A2D4C7L6_PYTIN (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7L6_PYTIN)

HSP 1 Score: 579 bits (1492), Expect = 5.480e-197
Identity = 295/619 (47.66%), Postives = 395/619 (63.81%), Query Frame = 0
Query:   19 LTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDV-PRLEVAFYTMKGGAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 631
            +T GFAF+ F     A  AV ++N + LDK H + V  +E L +  + P  +  P+   F    +  +WL D   RD F LR+           E E+ W +K +   L Y G+REK+ GK W     C  +++WSP GTYLTTFH  G+ALW GE +EK GRF H++VK+  FSP E Y++T +    D AI+VWEV TG++LR+FP+   T     V  G  + F+WS D +F+AR+GKD+IS+YELPS++LLDKKSLKA+G+  F WSP D VLAYWAPE  N PARVS+VE+PSR+ELRQKNL  VS+C+L W   G +L VKV RHSKSKKT++ NFE+FR+RESLVPVE +E K+ + AF++EP G RFAVV G+   RL V+FY M GG  KNEL    TL ++P +H+YWSP GN  +LA MGE     NG LE +D + + ++   EHF+C ++EWDPSGR V +AV QP+  S++K QMDNG+ L+SFQG++  E KKD FYQ  WRPRP +LL+  E   +VKNL+KYE+R                 ++K R   +F + V   +      R E + L  GYDS+DE  Y+V SRT + V+S  E +
Sbjct:   93 MTTGFAFVEFEQEAHAADAVRTINNFALDKRHTLLVNKYEDLHKFEATPSEFVAPKIDKFVEPKNLKTWLTDSARRDMFALRHGT---------ETEIFWSDKGEIS-LDYAGDREKQNGKQW-----CSQYVLWSPHGTYLTTFHPQGVALWAGEHYEKVGRFAHRNVKIAVFSPNENYLITLSETEVDNAIVVWEVKTGKLLRSFPLGKPTGEKGEVVQGIMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGIHDFFWSPTDPVLAYWAPEGNNVPARVSLVELPSRRELRQKNLFNVSDCKLQWHPNGTFLRVKVTRHSKSKKTLFTNFELFRLRESLVPVEMLEMKETIVAFSFEPKGSRFAVVHGEGNQRLNVSFYDMHGGNKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGMGE----MNGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVMSAVCQPIDNSYYKFQMDNGFTLWSFQGKKLLEEKKDAFYQFLWRPRPRNLLSDKEYADVVKNLKKYERRFNEMDRLKERERVAAEKAEKQRQIAEFTELVQARKSAARALRAEYIALLGGYDSEDEDEYIVQSRTFDDVISESEEV 692          
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A5D6XPM0_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPM0_9STRA)

HSP 1 Score: 576 bits (1484), Expect = 1.080e-195
Identity = 295/634 (46.53%), Postives = 399/634 (62.93%), Query Frame = 0
Query:    9 LGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDVP-RLEVAFYTMKGGAGKNELQEQE-----TLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 631
            L  PF ++   T GFA + +     A +AV ++NG+ LDK H + V  +  + + +S PE +  P+ + F    +  +WL D   RD FVLR+           E E+ W +K +   L Y G REK  GK W     C  +++WSP GTYL TFH PG+ALW GE++EK GRF HK+VK+  FSP ETY++T +    + AIIVW+V +G++LR FP    T     V  G  + F+WS D +F+AR+GKD++S+YELPS++LL+KKSLKA+GV  F WSP D +LAYWAPE  N PARVS+VE+PSR E+RQKNL  VS+C+L+W   G +L VKV RHSKSKKT++ NFE+FR+RE LVPVE +E K  + AFAWEP G RFA V G+   RL V+FY M GGA  ++    E     TL E+P +H+YWSP+GN  +LA +GE     NG LE +D + + ++   EHF+C ++EWDPSGR V T+V QP+  S++K QMDNGY L+SFQG+   E KKD FYQ  WRPRP SLL+  E   +VKNL+KYEKR                 ++K R++ +F+  V      +   R   V L  GYDS+DE  Y+V++   +VVLS  E +
Sbjct:   85 LSMPFGKSGSTT-GFALVAYDQEAHANEAVRTINGFALDKRHTMLVNKYSDVEKFQSTPETFAEPKVEKFAEPKNYKNWLMDSARRDMFVLRHGT---------ETELFWSDKGEIS-LEYDGAREKVNGKQW-----CSQYVLWSPHGTYLATFHQPGLALWAGEKYEKVGRFAHKNVKIAVFSPNETYLLTVSETDAENAIIVWDVKSGKILRTFPAGKPTGVKGEVVQGLQTPFKWSADDRFVARRGKDVVSVYELPSMKLLEKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRTEIRQKNLFNVSDCKLNWHPNGTFLGVKVTRHSKSKKTLFTNFEMFRVREPLVPVEMLEMKDSIVAFAWEPKGTRFATVHGESQLRLNVSFYDMNGGAAGSKAASTEITLLYTLTEKPCSHLYWSPLGNNIVLAGLGE----MNGSLEFWDTDERQSITAQEHFKCTHVEWDPSGRVVATSVCQPLDNSYYKFQMDNGYNLWSFQGKLLKEEKKDAFYQFLWRPRPRSLLSDKEYANVVKNLKKYEKRFNEMDRLKERERLAAIQAEKNRLRQEFQDLVEARVRAVQSARATYVSLLGGYDSEDEDEYIVETHVHDVVLSKAEEV 698          
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A3M6VP81_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP81_9STRA)

HSP 1 Score: 573 bits (1476), Expect = 1.470e-194
Identity = 296/627 (47.21%), Postives = 399/627 (63.64%), Query Frame = 0
Query:   12 PFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGD-VPRLEVAFYTMKG-GAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 631
            PFD + + T GFAF+ +     AK AV ++N + LDK H + V  +E + R       +  P+ + F    +  +WL D   RD FVLR+           E E+ W +K +     Y G+REK  GK W     C  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK+V    FSP E Y++T +    D AII+W+V T +MLRAFP    T     V  G  + F+WS   K++AR+G D+ISIYELPS++LL+KKSL+AEGV  F WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTM+ NFE+FR++E LVPVE +E K ++ AFAWEP G RFA V G+   RL V+FY M G      E+    TL+++  +H+YWSP+GN  +LA +GE     NG+LE +D   Q ++   EHF+C ++EWDPSGR V TAV QP+  S++K  MDNGY L++FQG++  E KK++FYQ  WRPRP +LL+ AE KK+VKNL+KYEKR                 +++ R   +F++ +  +    A RR E + L +GYDS+DE+ Y+V S T + VL  KE I
Sbjct:   87 PFDGSGKTT-GFAFVEYEQEAHAKDAVRTINNFALDKRHTMIVNKYEDIERYEKTTTEFVAPKVEKFVEPKNLQTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEI-EFVYAGDREKTNGKQW-----CSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVTRAVFSPHENYLITVSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKNEVVQGLMTPFKWSAGDKYVARRGNDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDLILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRLQEQLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLSVSFYDMDGENKSTKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKESFYQFLWRPRPRTLLSDAEYKKVVKNLKKYEKRFDQMDRLKERERQAAKNAERNRKVQEFQELLQRLLAAAAVRRGEYIALLDGYDSEDENEYIVQSHTYDDVLESKEEI 693          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKV7_ECTSI0.000e+089.87Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YNH6_9STRA2.790e-28059.68Eukaryotic translation initiation factor 3 subunit... [more]
A0A6H5KAX0_9PHAE1.820e-21778.43eIF2A domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A8K1FRG0_PYTOL2.620e-20048.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1APB3_PLAHL1.090e-19948.01Eukaryotic translation initiation factor 3 subunit... [more]
G5A2B4_PHYSP7.040e-19847.98Eukaryotic translation initiation factor 3 subunit... [more]
M4BHP4_HYAAE1.240e-19747.17Eukaryotic translation initiation factor 3 subunit... [more]
A0A2D4C7L6_PYTIN5.480e-19747.66Eukaryotic translation initiation factor 3 subunit... [more]
A0A5D6XPM0_9STRA1.080e-19546.53Eukaryotic translation initiation factor 3 subunit... [more]
A0A3M6VP81_9STRA1.470e-19447.21Eukaryotic translation initiation factor 3 subunit... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 624..632
NoneNo IPR availablePANTHERPTHR14068:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Bcoord: 2..629
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 151..490
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 327..551
e-value: 3.8E-6
score: 28.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 109..296
e-value: 1.8E-10
score: 42.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 10..65
e-value: 8.6E-10
score: 40.5
IPR011400Eukaryotic translation initiation factor 3 subunit BPIRSFPIRSF036424Transl_init_eIF3bcoord: 3..632
e-value: 4.8E-189
score: 626.0
IPR011400Eukaryotic translation initiation factor 3 subunit BPANTHERPTHR14068EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATEDcoord: 2..629
IPR011400Eukaryotic translation initiation factor 3 subunit BHAMAPMF_03001eIF3bcoord: 5..632
score: 73.397
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 14..47
e-value: 2.0E-5
score: 24.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 1..59
score: 9.32
IPR013979Translation initiation factor, beta propellor-like domainPFAMPF08662eIF2Acoord: 318..526
e-value: 2.0E-45
score: 155.0
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 13..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12767contigH-elongata_contig12767:2086..7253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12767.2041.1mRNA_H-elongata_contig12767.2041.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12767 626..7331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12767.2041.1 ID=prot_H-elongata_contig12767.2041.1|Name=mRNA_H-elongata_contig12767.2041.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=633bp
MGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSH
NIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLR
YSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELF
LMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIM
TCNFETGDKAIIVWEVLTGQMLRAFPMTTTTVADGAASLFRWSGDGKFLA
RKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANA
PARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKT
MYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDVPRLEV
AFYTMKGGAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHN
GRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQ
MDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRK
YEKRFEKDDKEKDRRKAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELV
DLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR011400EIF3B
IPR000504RRM_dom
IPR013979TIF_beta_prop-like
IPR035979RBD_domain_sf