prot_H-elongata_contig127375.2028.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig127375.2028.1
Unique Nameprot_H-elongata_contig127375.2028.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: D7FQU6_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU6_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 7.570e-46
Identity = 75/88 (85.23%), Postives = 81/88 (92.05%), Query Frame = 0
Query:    1 MNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTSTD 88
            MNFVAL+LL+AC GDDE AFWIL GMC+ L L GLWCQGLERLDLCFF+L+RLL+ HCPSLRQHLSDEGVELSMFTSRWFVTLFTSTD
Sbjct: 1242 MNFVALALLEACEGDDENAFWILAGMCENLELGGLWCQGLERLDLCFFSLERLLRRHCPSLRQHLSDEGVELSMFTSRWFVTLFTSTD 1329          
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A6J8ABF2_MYTCO (RABGAP1 n=4 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8ABF2_MYTCO)

HSP 1 Score: 66.6 bits (161), Expect = 7.180e-11
Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 0
Query:    7 SLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 86
            SL +     +E AF +L  +C    +  L+  G E L L F+ L+RL++ H P L +H ++ G+E+ MF S+WF+TLFT+
Sbjct:  603 SLYRISKMPEEQAFSVLIKICFDYKVRELFKPGFEDLHLKFYQLERLMEDHIPDLFEHFTEMGLEIHMFASQWFLTLFTA 682          
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A2C9MAM6_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9MAM6_BIOGL)

HSP 1 Score: 66.2 bits (160), Expect = 9.650e-11
Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    1 MNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 86
            ++F+A +LL      +E AF +L  +     L  L+ QG + L L F+ L+RL++ H P L  H ++ G+E+ MF S+WF+TLFT+
Sbjct:  464 LSFLAAALLLHMP--EEQAFCVLVKIMYDYQLRELFKQGFQVLHLKFYQLERLMQDHLPDLYDHFAEMGLEIHMFASQWFLTLFTA 547          
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A2T7NKP9_POMCA (Uncharacterized protein n=4 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NKP9_POMCA)

HSP 1 Score: 66.2 bits (160), Expect = 9.820e-11
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    1 MNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 86
            ++F+A +LL      +E AF +LT +     L  L+ QG E L L F+ L+RLL+     L +H  D G+E+ MF S+WF+TLFT+
Sbjct:  618 LSFLAAALLLHMP--EEQAFCVLTKIMFDYGLRNLFKQGFEELHLKFYQLERLLQDQMSDLYEHFMDMGLEVHMFASQWFLTLFTA 701          
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A8B6G0U1_MYTGA (Rab GTPase-activating protein 1 n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6G0U1_MYTGA)

HSP 1 Score: 65.5 bits (158), Expect = 1.710e-10
Identity = 29/71 (40.85%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   16 DEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 86
            +E AF +L  +C    +  L+  G E L L F+ L+RL++ H P L +H ++ G+E+ MF S+WF+TLFT+
Sbjct:    3 EEQAFSVLIKICFDYKVRELFKPGFEDLHLKFYQLERLMEDHIPDLFEHFTEMGLEIHMFASQWFLTLFTA 73          
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A1V9YXP8_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YXP8_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 2.490e-10
Identity = 32/89 (35.96%), Postives = 47/89 (52.81%), Query Frame = 0
Query:    1 MNFVALSLLKACAGDDEMAFWILTGMCDRLHLE---GLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 86
            MNF+   LL+  A D+   FW    +C+         L+  G  +L   F  LD L++   P L  H+  +GV +SMF +RWF+TLF+S
Sbjct:  749 MNFIVRLLLENEANDEAAVFWTFVQLCEGSSATTSCALFDAGFHQLQTLFTKLDILIREQMPDLHIHMERQGVHVSMFAARWFLTLFSS 837          
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A7S0I2Q3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I2Q3_9CRYP)

HSP 1 Score: 64.3 bits (155), Expect = 4.550e-10
Identity = 34/84 (40.48%), Postives = 46/84 (54.76%), Query Frame = 0
Query:    1 MNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLF 84
            MNF+   LL       E AFW+L  M  R  L  L+     +L +  F LDRL+    PSL QH S++G +++ FTS W +TLF
Sbjct:  294 MNFLCAILLLHMR--QEHAFWVLVQMMRRYRLRDLYLSRSPQLAVELFKLDRLILSCTPSLHQHFSEQGFDVTTFTSEWLLTLF 375          
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A024U9D0_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9D0_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.610e-10
Identity = 32/86 (37.21%), Postives = 45/86 (52.33%), Query Frame = 0
Query:    1 MNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 86
            MNFV   LL     D+   FW    +CD    + L+  G   L + F  L+ L++   P +  H   +GV +SMF +RWF+TLFTS
Sbjct:  583 MNFVVRLLLDN-QKDEATVFWAFVNLCDAAPTQSLYEPGFHTLHVLFGKLEVLVQQQMPDVYNHFITQGVAVSMFAARWFLTLFTS 667          
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: J9ITY4_9SPIT (TBC domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9ITY4_9SPIT)

HSP 1 Score: 64.3 bits (155), Expect = 4.640e-10
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0
Query:    1 MNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTST 87
            MNF++  LL     D+ +AF++L  +     L+ ++  G E L      +D LLK   P+L+QH  D  VE+ MF+S WF++LFTST
Sbjct:  671 MNFLSACLLLH--SDEVIAFYLLETLLSDYELKDVYMSGFEGLYKHCKIVDALLKEKLPNLQQHFKDNQVEVEMFSSDWFISLFTST 755          
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A0P4WHT7_SCYOL (Uncharacterized protein n=6 Tax=Portunidae TaxID=6757 RepID=A0A0P4WHT7_SCYOL)

HSP 1 Score: 64.3 bits (155), Expect = 4.680e-10
Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 0
Query:    1 MNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 86
            ++F+A +LL      +E  F +L  +     L  L+  G E L + FF L +L++ H P L QH  ++GVE+ MF S+WF+TL+T+
Sbjct:  696 LSFLAAALLLHMP--EEQTFCVLKRIMFEYGLRELFRDGFEVLHMRFFQLGKLIEEHIPELWQHFQEQGVEVHMFASQWFLTLYTA 779          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQU6_ECTSI7.570e-4685.23Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
A0A6J8ABF2_MYTCO7.180e-1138.75RABGAP1 n=4 Tax=Mytilus coruscus TaxID=42192 RepID... [more]
A0A2C9MAM6_BIOGL9.650e-1138.37Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
A0A2T7NKP9_POMCA9.820e-1140.70Uncharacterized protein n=4 Tax=Pomacea canalicula... [more]
A0A8B6G0U1_MYTGA1.710e-1040.85Rab GTPase-activating protein 1 n=2 Tax=Mytilus ga... [more]
A0A1V9YXP8_9STRA2.490e-1035.96Rab-GAP TBC domain-containing protein n=1 Tax=Thra... [more]
A0A7S0I2Q3_9CRYP4.550e-1040.48Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A024U9D0_9STRA4.610e-1037.21Rab-GAP TBC domain-containing protein n=2 Tax=Apha... [more]
J9ITY4_9SPIT4.640e-1039.08TBC domain-containing protein n=1 Tax=Oxytricha tr... [more]
A0A0P4WHT7_SCYOL4.680e-1037.21Uncharacterized protein n=6 Tax=Portunidae TaxID=6... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 1..86
e-value: 3.1E-18
score: 66.2
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..88
score: 13.048
NoneNo IPR availableGENE3D1.10.472.80coord: 30..87
e-value: 7.4E-17
score: 63.4
NoneNo IPR availablePANTHERPTHR22957:SF497GTPASE ACTIVATING PROTEIN AND CENTROSOME-ASSOCIATED, ISOFORM Bcoord: 1..86
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 1..86
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..88
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 40..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig127375contigH-elongata_contig127375:730..1336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig127375.2028.1mRNA_H-elongata_contig127375.2028.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig127375 730..1342 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig127375.2028.1 ID=prot_H-elongata_contig127375.2028.1|Name=mRNA_H-elongata_contig127375.2028.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
MNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTL
DRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTSTD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf