prot_H-elongata_contig127350.2027.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig127350.2027.1
Unique Name	prot_H-elongata_contig127350.2027.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	92

Homology

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BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot
Match: D8LDY8_ECTSI (Phatr1_ua_kg.chr_17000030 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY8_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 1.500e-49
Identity = 84/92 (91.30%), Postives = 89/92 (96.74%), Query Frame = 0

Query:    1 QERDLVDELVAFNCDPNTQYNEVASLFLRDADTAIRQLFHFRESGQRDTATFSSGALFVFFVPYAIMGCLTYGIAVPSGLFVPSLLSGAAFG 92
            QER LVDELVA+NCDPNT+YNEVASLFLRDADTAIRQLFHFRESG+R+ +TFSSGALFVFFVPY IMGCLTYGIAVPSGLFVPSLLSGAAFG
Sbjct:  324 QERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQLFHFRESGRREISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLSGAAFG 415

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BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot
Match: A0A7R9U7Y3_9STRA (Chloride channel protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Y3_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.330e-39
Identity = 72/92 (78.26%), Postives = 82/92 (89.13%), Query Frame = 0

Query:    1 QERDLVDELVAFNCDPNTQYNEVASLFLRDADTAIRQLFHFRESGQRDTATFSSGALFVFFVPYAIMGCLTYGIAVPSGLFVPSLLSGAAFG 92
            QER+LVD+LV+F CD +T+YNEVASLFL DADTAI+QLFHFRESG  +  TFSSGAL +FF PY IMGC+TYG+AVPSGLFVPSLLSGAAFG
Sbjct:  460 QERELVDDLVSFGCDEDTEYNEVASLFLTDADTAIKQLFHFRESGDDENNTFSSGALLLFFFPYIIMGCVTYGLAVPSGLFVPSLLSGAAFG 551

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BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot
Match: A0A7S1D5H2_CYCTE (Chloride channel protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5H2_CYCTE)

HSP 1 Score: 138 bits (348), Expect = 5.270e-37
Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = 0

Query:    1 QERDLVDELVAFNCDPNTQYNEVASLFLRDADTAIRQLFHFRESGQRDTATFSSGALFVFFVPYAIMGCLTYGIAVPSGLFVPSLLSGAAFG 92
            QE++LVD LVAF CDP  +YNEVASL   DADTAI+QLFHFRE+G  D++TFSS ALF+FFVPY  +  +TYGIAVPSGLFVPSLLSGAAFG
Sbjct:   49 QEKNLVDALVAFRCDPKHEYNEVASLIFTDADTAIKQLFHFREAGADDSSTFSSAALFLFFVPYIALASITYGIAVPSGLFVPSLLSGAAFG 140

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BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot
Match: A0A7S2UST4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UST4_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.230e-36
Identity = 65/92 (70.65%), Postives = 77/92 (83.70%), Query Frame = 0

Query:    1 QERDLVDELVAFNCDPNTQYNEVASLFLRDADTAIRQLFHFRESGQRDTATFSSGALFVFFVPYAIMGCLTYGIAVPSGLFVPSLLSGAAFG 92
            QE+ LVD+LV+FNC P+ QYN+VASL+  +ADTAI+QLFHFRE G+ D  TFSSGALFVFF+PY  + C TYG+ VPSGLFVP LLSGAAFG
Sbjct:  107 QEKQLVDDLVSFNCPPD-QYNQVASLYFTEADTAIKQLFHFREGGEADVQTFSSGALFVFFLPYICLACWTYGLGVPSGLFVPCLLSGAAFG 197

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BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot
Match: A0A7S2WR56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WR56_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.000e-35
Identity = 61/92 (66.30%), Postives = 74/92 (80.43%), Query Frame = 0

Query:    1 QERDLVDELVAFNCDPNTQYNEVASLFLRDADTAIRQLFHFRESGQRDTATFSSGALFVFFVPYAIMGCLTYGIAVPSGLFVPSLLSGAAFG 92
            QE++LV ELV+F C+P T+YNEVA+L   DADTAI+QLFHF+E G  ++ TFSS AL +FF+PY  M    YGIA+PSGLFVPSLLSGAAFG
Sbjct:   46 QEQNLVKELVSFKCNPKTEYNEVATLIFTDADTAIKQLFHFQEDGSNNSRTFSSAALVIFFLPYITMATFVYGIAIPSGLFVPSLLSGAAFG 137

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BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot
Match: A0A7S0UJS8_9STRA (Chloride channel protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJS8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 9.000e-35
Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 0

Query:    1 QERDLVDELVAFNCDPNTQYNEVASLFLRDADTAIRQLFHFRESGQRDTATFSSGALFVFFVPYAIMGCLTYGIAVPSGLFVPSLLSGAAFG 92
            QE++LV+ LV F CDP  +YNEVASL   +ADTAI+QLFHFRE+G  D ATFSSGALF+FFVPY  M  + YGIAVPSGLFVPSLL+GAAFG
Sbjct:  353 QEKNLVESLVPFQCDPEKEYNEVASLIFAEADTAIKQLFHFREAGGDDNATFSSGALFLFFVPYITMATVVYGIAVPSGLFVPSLLAGAAFG 444

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BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot
Match: K0R8R8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R8R8_THAOC)

HSP 1 Score: 133 bits (335), Expect = 2.450e-34
Identity = 65/92 (70.65%), Postives = 76/92 (82.61%), Query Frame = 0

Query:    1 QERDLVDELVAFNCDPNTQYNEVASLFLRDADTAIRQLFHFRESGQRDTATFSSGALFVFFVPYAIMGCLTYGIAVPSGLFVPSLLSGAAFG 92
            QE++LV  LV FNC P  +YNEVASL+  +AD AIRQLFHFRE+G+ DT+TFSS ALF+FF+PY  +  L YGIAVPSGLFVPSLLSGAAFG
Sbjct:  605 QEKELVGNLVPFNCIPGKEYNEVASLYFCEADVAIRQLFHFRETGETDTSTFSSAALFLFFIPYITLASLVYGIAVPSGLFVPSLLSGAAFG 696

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BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot
Match: A0A1E7FXI3_9STRA (Chloride channel protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXI3_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.370e-34
Identity = 64/92 (69.57%), Postives = 76/92 (82.61%), Query Frame = 0

Query:    1 QERDLVDELVAFNCDPNTQYNEVASLFLRDADTAIRQLFHFRESGQRDTATFSSGALFVFFVPYAIMGCLTYGIAVPSGLFVPSLLSGAAFG 92
            QE++LV+ LV F C+P  +YNEVASL   +ADTAI+QLFHFRE G  D +TFSSGALF+FFVPY +M  + YGIAVPSGLFVPSLL+GAAFG
Sbjct:  409 QEKNLVESLVPFQCEPGKEYNEVASLIFTEADTAIKQLFHFREGGGEDNSTFSSGALFLFFVPYIMMSSVVYGIAVPSGLFVPSLLAGAAFG 500

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BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot
Match: A0A7S2CPI8_9STRA (Chloride channel protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPI8_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.670e-33
Identity = 63/92 (68.48%), Postives = 77/92 (83.70%), Query Frame = 0

Query:    1 QERDLVDELVAFNCDPNTQYNEVASLFLRDADTAIRQLFHFRESGQRDTATFSSGALFVFFVPYAIMGCLTYGIAVPSGLFVPSLLSGAAFG 92
            QER+L+++LV+F C PN +YNEVASLF  D+DTAI+QLFHFRE G+ D  TFS+GALF+F+  Y  M C+TYG+AVPSGLFVPSLLSGAA G
Sbjct:  124 QERELIEQLVSFQCKPN-EYNEVASLFFTDSDTAIKQLFHFREIGENDQHTFSAGALFLFWSLYTAMACITYGLAVPSGLFVPSLLSGAAMG 214

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BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot
Match: A0A7S2YMG2_9STRA (Chloride channel protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMG2_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.880e-33
Identity = 63/92 (68.48%), Postives = 74/92 (80.43%), Query Frame = 0

Query:    1 QERDLVDELVAFNCDPNTQYNEVASLFLRDADTAIRQLFHFRESGQRDTATFSSGALFVFFVPYAIMGCLTYGIAVPSGLFVPSLLSGAAFG 92
            QE+ LV+ LV F C P  +YNEVASL   + D AI+QLFHFRE+G  D +TFSSGALF+FF+PY ++  LTYGIAVPSGLFVPSLLSGAAFG
Sbjct:  347 QEKSLVEHLVPFRCKPGKEYNEVASLIFTEPDIAIKQLFHFREAGADDVSTFSSGALFMFFIPYIMLATLTYGIAVPSGLFVPSLLSGAAFG 438

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot

BLAST of mRNA_H-elongata_contig127350.2027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDY8_ECTSI	1.500e-49	91.30	Phatr1_ua_kg.chr_17000030 n=1 Tax=Ectocarpus silic...	[more]
A0A7R9U7Y3_9STRA	1.330e-39	78.26	Chloride channel protein n=1 Tax=Pinguiococcus pyr...	[more]
A0A7S1D5H2_CYCTE	5.270e-37	73.91	Chloride channel protein n=1 Tax=Cyclophora tenuis...	[more]
A0A7S2UST4_9STRA	3.230e-36	70.65	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A7S2WR56_9STRA	2.000e-35	66.30	Hypothetical protein (Fragment) n=1 Tax=Eucampia a...	[more]
A0A7S0UJS8_9STRA	9.000e-35	71.74	Chloride channel protein n=1 Tax=Pseudo-nitzschia ...	[more]
K0R8R8_THAOC	2.450e-34	70.65	Uncharacterized protein (Fragment) n=1 Tax=Thalass...	[more]
A0A1E7FXI3_9STRA	3.370e-34	69.57	Chloride channel protein n=1 Tax=Fragilariopsis cy...	[more]
A0A7S2CPI8_9STRA	3.670e-33	68.48	Chloride channel protein n=2 Tax=Dictyocha speculu...	[more]
A0A7S2YMG2_9STRA	3.880e-33	68.48	Chloride channel protein n=1 Tax=Amphiprora paludo...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001807	Chloride channel, voltage gated	PFAM	PF00654	Voltage_CLC	coord: 28..92 e-value: 2.1E-9 score: 37.1
IPR014743	Chloride channel, core	GENE3D	1.10.3080.10		coord: 9..92 e-value: 1.8E-10 score: 42.3
IPR014743	Chloride channel, core	SUPERFAMILY	81340	Clc chloride channel	coord: 51..92
None	No IPR available	PANTHER	PTHR11689:SF92	H(+)/CL(-) EXCHANGE TRANSPORTER 7	coord: 8..92
None	No IPR available	PANTHER	PTHR11689	CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER	coord: 8..92
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 76..92
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..55
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 56..75
None	No IPR available	TMHMM	TMhelix		coord: 54..76

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig127350	contig	H-elongata_contig127350:1264..1691 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig127350.2027.1	mRNA_H-elongata_contig127350.2027.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig127350 1264..1691 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig127350.2027.1 ID=prot_H-elongata_contig127350.2027.1|Name=mRNA_H-elongata_contig127350.2027.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
QERDLVDELVAFNCDPNTQYNEVASLFLRDADTAIRQLFHFRESGQRDTA
TFSSGALFVFFVPYAIMGCLTYGIAVPSGLFVPSLLSGAAFG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001807	Cl-channel_volt-gated
IPR014743	Cl-channel_core