prot_H-elongata_contig127191.2019.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig127191.2019.1
Unique Nameprot_H-elongata_contig127191.2019.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
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BLAST of mRNA_H-elongata_contig127191.2019.1 vs. uniprot
Match: A0A6H5KTU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU3_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.110e-23
Identity = 62/105 (59.05%), Postives = 83/105 (79.05%), Query Frame = 0 
Query:   11 RWAKHTDRTRAETVVAEREAALDKARVDAERERQAWESLEKSLKASAATREKEARETAEEEGREEIRTATAACRSAEEAAAGLRRQLARAEAETASAVVREQEAQ 115
            RWA+ TDR RA       +AALD AR +AERER+AWESL+ +L+ SAA RE+EARE+A+EEGREE+R+  AACRSA+EAA+ L  +LA+AE + A+AV+ +Q+AQ
Sbjct:  623 RWARDTDRARAAAAAVXXDAALDGARREAERERKAWESLQVALERSAAAREREARESAQEEGREEMRSMAAACRSAKEAASSLELRLAQAETDAAAAVLLQQQAQ 727
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BLAST of mRNA_H-elongata_contig127191.2019.1 vs. uniprot
Match: D7FK56_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK56_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 5.890e-21
Identity = 59/105 (56.19%), Postives = 80/105 (76.19%), Query Frame = 0 
Query:   11 RWAKHTDRTRAETVVAEREAALDKARVDAERERQAWESLEKSLKASAATREKEARETAEEEGREEIRTATAACRSAEEAAAGLRRQLARAEAETASAVVREQEAQ 115
            RWA+ TDR RA       + AL  AR +AERER+AWES++ +L+ SAA RE+EARE+A+EEGREE+R+  AACRSAEE A+ L  +LA+AE + A+AV+ +Q+AQ
Sbjct:  738 RWARDTDRARAXXXXXXXDEALAGARREAERERKAWESVQAALEGSAAAREREARESAQEEGREEMRSMAAACRSAEETASSLELRLAQAETDAAAAVLGQQQAQ 842
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127191.2019.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTU3_9PHAE2.110e-2359.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK56_ECTSI5.890e-2156.19Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig127191contigH-elongata_contig127191:403..886 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig127191.2019.1mRNA_H-elongata_contig127191.2019.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig127191 403..886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig127191.2019.1 ID=prot_H-elongata_contig127191.2019.1|Name=mRNA_H-elongata_contig127191.2019.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
MGWGWWGGTLRWAKHTDRTRAETVVAEREAALDKARVDAERERQAWESLE
KSLKASAATREKEARETAEEEGREEIRTATAACRSAEEAAAGLRRQLARA
EAETASAVVREQEAQ
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