prot_H-elongata_contig126935.1997.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig126935.1997.1
Unique Nameprot_H-elongata_contig126935.1997.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
BLAST of mRNA_H-elongata_contig126935.1997.1 vs. uniprot
Match: D8LHH9_ECTSI (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH9_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 3.580e-33
Identity = 57/64 (89.06%), Postives = 58/64 (90.62%), Query Frame = 0
Query:    1 MSSKPVALLLGDTFPDFEAETTQGKIKLHDYLGSSWGLIISHPADFTPVCTTELGTCAKLNQEG 64
            MSS PVALLLGD FPDFEAETT G IKLHDYLGSSWGL+ SHPADFTPVCTTELGTCAKLN EG
Sbjct:    1 MSSDPVALLLGDKFPDFEAETTAGPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEG 64          
BLAST of mRNA_H-elongata_contig126935.1997.1 vs. uniprot
Match: A0A1A8CSS9_9TELE (Peroxiredoxin 6 n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8CSS9_9TELE)

HSP 1 Score: 96.7 bits (239), Expect = 1.640e-24
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    8 LLLGDTFPDFEAETTQGKIKLHDYLGSSWGLIISHPADFTPVCTTELGTCAKLNQE 63
            LLLGD FPDFEAETT GKIK HD+LG SWG++ SHP D+TPVCTTELG  AKL+ E
Sbjct:    4 LLLGDVFPDFEAETTVGKIKFHDFLGDSWGILFSHPRDYTPVCTTELGRAAKLSSE 59          
BLAST of mRNA_H-elongata_contig126935.1997.1 vs. uniprot
Match: B5X838_SALSA (Peroxiredoxin-6 n=10 Tax=Salmonidae TaxID=8015 RepID=B5X838_SALSA)

HSP 1 Score: 96.7 bits (239), Expect = 2.770e-23
Identity = 41/56 (73.21%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    8 LLLGDTFPDFEAETTQGKIKLHDYLGSSWGLIISHPADFTPVCTTELGTCAKLNQE 63
            LLLGD FP+FEAETT+GKIK HD+LG SWG++ SHP+D+TPVCTTELG  AKL+ E
Sbjct:    4 LLLGDVFPNFEAETTKGKIKFHDFLGDSWGILFSHPSDYTPVCTTELGRAAKLSDE 59          
BLAST of mRNA_H-elongata_contig126935.1997.1 vs. uniprot
Match: A0A8C6LZY2_NOTFU (Thioredoxin domain-containing protein n=2 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6LZY2_NOTFU)

HSP 1 Score: 96.7 bits (239), Expect = 2.770e-23
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    8 LLLGDTFPDFEAETTQGKIKLHDYLGSSWGLIISHPADFTPVCTTELGTCAKLNQE 63
            LLLGD FPDFEAETT GKIK HD+LG SWG++ SHP D+TPVCTTELG  AKL+ E
Sbjct:    4 LLLGDVFPDFEAETTVGKIKFHDFLGDSWGILFSHPRDYTPVCTTELGRAAKLSSE 59          
BLAST of mRNA_H-elongata_contig126935.1997.1 vs. uniprot
Match: A0A4W6BRB8_LATCA (Peroxiredoxin-6 n=3 Tax=Percomorphaceae TaxID=1489872 RepID=A0A4W6BRB8_LATCA)

HSP 1 Score: 96.7 bits (239), Expect = 2.830e-23
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    8 LLLGDTFPDFEAETTQGKIKLHDYLGSSWGLIISHPADFTPVCTTELGTCAKLNQE 63
            LLLGD FPDFEAETT GKIK H+YLG SWG++ SHP D+TPVCTTELG  A+L++E
Sbjct:    4 LLLGDVFPDFEAETTTGKIKFHEYLGDSWGILFSHPKDYTPVCTTELGRAARLSEE 59          
BLAST of mRNA_H-elongata_contig126935.1997.1 vs. uniprot
Match: A0A8C6LV07_NOTFU (Thioredoxin domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6LV07_NOTFU)

HSP 1 Score: 96.7 bits (239), Expect = 3.350e-23
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    8 LLLGDTFPDFEAETTQGKIKLHDYLGSSWGLIISHPADFTPVCTTELGTCAKLNQE 63
            LLLGD FPDFEAETT GKIK HD+LG SWG++ SHP D+TPVCTTELG  AKL+ E
Sbjct:    4 LLLGDVFPDFEAETTVGKIKFHDFLGDSWGILFSHPRDYTPVCTTELGRAAKLSSE 59          
BLAST of mRNA_H-elongata_contig126935.1997.1 vs. uniprot
Match: UPI0003EBE390 (peroxiredoxin-6-like n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=UPI0003EBE390)

HSP 1 Score: 92.4 bits (228), Expect = 3.760e-23
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    8 LLLGDTFPDFEAETTQGKIKLHDYLGSSWGLIISHPADFTPVCTTELGTCAKLNQE 63
            LLLGD FPDFEAETT G IKLH++LG SWG++ SHP D+TPVCTTELG  A+L+ +
Sbjct:    4 LLLGDVFPDFEAETTTGTIKLHEFLGDSWGILFSHPRDYTPVCTTELGRAARLSSD 59          
BLAST of mRNA_H-elongata_contig126935.1997.1 vs. uniprot
Match: A0A6P7K4I4_9TELE (Peroxiredoxin-6 n=11 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6P7K4I4_9TELE)

HSP 1 Score: 96.3 bits (238), Expect = 3.990e-23
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    8 LLLGDTFPDFEAETTQGKIKLHDYLGSSWGLIISHPADFTPVCTTELGTCAKLNQE 63
            LLLGD FPDFEAETT GKIKLH++LG SWG++ SHP D+TPVCTTELG  A+L+ E
Sbjct:    4 LLLGDVFPDFEAETTSGKIKLHEFLGDSWGILFSHPRDYTPVCTTELGRAARLSSE 59          
BLAST of mRNA_H-elongata_contig126935.1997.1 vs. uniprot
Match: UPI001CA71DEF (peroxiredoxin n=1 Tax=Algiphilus sp. NNCM1 TaxID=2834409 RepID=UPI001CA71DEF)

HSP 1 Score: 95.5 bits (236), Expect = 5.990e-23
Identity = 41/58 (70.69%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    6 VALLLGDTFPDFEAETTQGKIKLHDYLGSSWGLIISHPADFTPVCTTELGTCAKLNQE 63
            +AL LGDT PDFEA+TT+G+I+ HD+LG SWG++ SHPAD+TPVCTTELG  AKL QE
Sbjct:    1 MALRLGDTAPDFEADTTEGRIRFHDWLGDSWGVLFSHPADYTPVCTTELGETAKLKQE 58          
BLAST of mRNA_H-elongata_contig126935.1997.1 vs. uniprot
Match: A0A4W3JQ86_CALMI (Peroxiredoxin-6 n=2 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3JQ86_CALMI)

HSP 1 Score: 95.5 bits (236), Expect = 7.290e-23
Identity = 40/58 (68.97%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    6 VALLLGDTFPDFEAETTQGKIKLHDYLGSSWGLIISHPADFTPVCTTELGTCAKLNQE 63
            +A+LLGD FPDFEA+TT+G+I  +D+LGSSWG+I SHPAD+TPVCTTELG  AK+++E
Sbjct:    1 MAILLGDKFPDFEADTTEGRIHFYDWLGSSWGIIFSHPADYTPVCTTELGRAAKMSKE 58          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126935.1997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHH9_ECTSI3.580e-3389.06Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A1A8CSS9_9TELE1.640e-2475.00Peroxiredoxin 6 n=1 Tax=Nothobranchius kadleci Tax... [more]
B5X838_SALSA2.770e-2373.21Peroxiredoxin-6 n=10 Tax=Salmonidae TaxID=8015 Rep... [more]
A0A8C6LZY2_NOTFU2.770e-2375.00Thioredoxin domain-containing protein n=2 Tax=Noth... [more]
A0A4W6BRB8_LATCA2.830e-2373.21Peroxiredoxin-6 n=3 Tax=Percomorphaceae TaxID=1489... [more]
A0A8C6LV07_NOTFU3.350e-2375.00Thioredoxin domain-containing protein n=1 Tax=Noth... [more]
UPI0003EBE3903.760e-2369.64peroxiredoxin-6-like n=1 Tax=Neolamprologus bricha... [more]
A0A6P7K4I4_9TELE3.990e-2373.21Peroxiredoxin-6 n=11 Tax=Percomorphaceae TaxID=148... [more]
UPI001CA71DEF5.990e-2370.69peroxiredoxin n=1 Tax=Algiphilus sp. NNCM1 TaxID=2... [more]
A0A4W3JQ86_CALMI7.290e-2368.97Peroxiredoxin-6 n=2 Tax=Callorhinchus milii TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 11..64
e-value: 2.3E-11
score: 43.7
NoneNo IPR availableGENE3D3.40.30.10coord: 6..66
e-value: 2.3E-18
score: 68.2
NoneNo IPR availablePANTHERPTHR43503FAMILY NOT NAMEDcoord: 6..63
NoneNo IPR availablePANTHERPTHR43503:SF9PEROXIREDOXIN PRX1, MITOCHONDRIALcoord: 6..63
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 7..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig126935contigH-elongata_contig126935:692..1760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig126935.1997.1mRNA_H-elongata_contig126935.1997.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig126935 692..1760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig126935.1997.1 ID=prot_H-elongata_contig126935.1997.1|Name=mRNA_H-elongata_contig126935.1997.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
MSSKPVALLLGDTFPDFEAETTQGKIKLHDYLGSSWGLIISHPADFTPVC
TTELGTCAKLNQEGQS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR036249Thioredoxin-like_sf