prot_H-elongata_contig126848.1992.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig126848.1992.1
Unique Nameprot_H-elongata_contig126848.1992.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length121
Homology
BLAST of mRNA_H-elongata_contig126848.1992.1 vs. uniprot
Match: D7G3C0_ECTSI (Sorting and Assembly Machinery 50kDa protein (N-terminal) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C0_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 1.140e-63
Identity = 94/113 (83.19%), Postives = 101/113 (89.38%), Query Frame = 0
Query:    1 RPLGSCKRTHFSDRFNLGGPMSLRGFPFYGVGPRAPKEEGGCPGGDALGGDIRYSASASLGFPXXXPSMANAGWRGYVFTNLGNLTTWDTPLAQYARDTRVSVGLAAAWNFMG 113
            RP G  KRT FSDRFNLGGPM+LRGFPFYG GPR+PKEEGGC GGDALGGDIRY+ASASLGFP   P+MA AGWRGY+FTNLGNLTTWDTPL QY RDTRVSVG+AAAWNF+G
Sbjct:  305 RPFGPSKRTFFSDRFNLGGPMTLRGFPFYGAGPRSPKEEGGCEGGDALGGDIRYTASASLGFPFPVPAMATAGWRGYLFTNLGNLTTWDTPLKQYGRDTRVSVGVAAAWNFLG 417          
BLAST of mRNA_H-elongata_contig126848.1992.1 vs. uniprot
Match: A0A2D4BF57_PYTIN (Sorting and assembly machinery component 50 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF57_PYTIN)

HSP 1 Score: 118 bits (295), Expect = 2.020e-28
Identity = 61/119 (51.26%), Postives = 74/119 (62.18%), Query Frame = 0
Query:    9 THFSDRFNLGGPMSLRGFPFYGVGPRAPKEEGGCPGGDALGGDIRYSASASLGFPXXXPSMANAGWRGYVFTNLGNLTTWDTPLAQ------YARDTRVSVGLAAAWNF-MGEVVFAYS 120
            T  SDRF LGGP+S+RGF   G+GPRA   +GG   GDALGGD+ Y+ASAS+GFP   P MA  G RG +F N GNLTTW   L +         DTRVSVG+   W   +G +  +YS
Sbjct:  278 TRLSDRFFLGGPLSVRGFHHKGIGPRASPNDGGVKSGDALGGDVSYTASASMGFPLPVPLMAMLGMRGQIFANAGNLTTWSRLLNEKKWMKHLVDDTRVSVGVGIVWGTSIGRIEASYS 396          
BLAST of mRNA_H-elongata_contig126848.1992.1 vs. uniprot
Match: A0A2D4CD39_PYTIN (Sorting and assembly machinery component 50 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD39_PYTIN)

HSP 1 Score: 117 bits (292), Expect = 5.010e-28
Identity = 61/119 (51.26%), Postives = 73/119 (61.34%), Query Frame = 0
Query:    9 THFSDRFNLGGPMSLRGFPFYGVGPRAPKEEGGCPGGDALGGDIRYSASASLGFPXXXPSMANAGWRGYVFTNLGNLTTWDTPLAQ------YARDTRVSVGLAAAWNF-MGEVVFAYS 120
            T  SDRF LGGP+S+RGF   G+GPRA   +GG   GDALGGD+ Y+ASAS+GFP   P MA  G RG +F N GNLTTW   L +         DTRVSVG+   W   +G +   YS
Sbjct:  300 TRLSDRFFLGGPLSVRGFHHKGIGPRASPNDGGVKSGDALGGDVSYTASASMGFPLPVPLMAMLGMRGQIFANAGNLTTWSRLLNEKKWMKHLVDDTRVSVGVGIVWGTSIGRIEANYS 418          
BLAST of mRNA_H-elongata_contig126848.1992.1 vs. uniprot
Match: A0A8K1CC02_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CC02_PYTOL)

HSP 1 Score: 114 bits (286), Expect = 1.210e-27
Identity = 59/119 (49.58%), Postives = 74/119 (62.18%), Query Frame = 0
Query:    9 THFSDRFNLGGPMSLRGFPFYGVGPRAPKEEGGCPGGDALGGDIRYSASASLGFPXXXPSMANAGWRGYVFTNLGNLTTWDTPLAQ------YARDTRVSVGLAAAWNF-MGEVVFAYS 120
            T  SDRF LGGP+S+RGF   G+GPRA   +GG   GD+LGGD+ Y+A+AS+GFP   P MA  G RG+VF N+GNLTTW   L +         DTR SVG+   W   +G +   YS
Sbjct:  320 TRLSDRFFLGGPLSVRGFNHKGIGPRASPNDGGSKWGDSLGGDVSYTATASMGFPLPVPLMAMLGMRGHVFANVGNLTTWSRLLDEKKWMKHLVDDTRASVGVGIVWGTSIGRIEANYS 438          
BLAST of mRNA_H-elongata_contig126848.1992.1 vs. uniprot
Match: A0A484DQ43_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQ43_BRELC)

HSP 1 Score: 114 bits (284), Expect = 2.320e-27
Identity = 55/108 (50.93%), Postives = 68/108 (62.96%), Query Frame = 0
Query:    9 THFSDRFNLGGPMSLRGFPFYGVGPRAPKEEGGCPGGDALGGDIRYSASASLGFPXXXPSMANAGWRGYVFTNLGNLTTWDTPLAQ------YARDTRVSVGLAAAWN 110
               SDRF LGGPMSLRGF + G+GPR+  E+GG   GDALGGD+ Y  +AS+GFP   P ++  G RG +F N GNLTTWD  L +         DTRVS+G+   W 
Sbjct:  320 ARISDRFFLGGPMSLRGFNYKGIGPRSSPEDGGVAQGDALGGDVSYHGTASVGFPVPLPLLSALGLRGQLFANAGNLTTWDRVLDENQWMKNLVDDTRVSIGMGLVWG 427          
BLAST of mRNA_H-elongata_contig126848.1992.1 vs. uniprot
Match: A0A3M6VD75_9STRA (Omp85 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD75_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.230e-27
Identity = 58/108 (53.70%), Postives = 68/108 (62.96%), Query Frame = 0
Query:    9 THFSDRFNLGGPMSLRGFPFYGVGPRAPKEEGGCPGGDALGGDIRYSASASLGFPXXXPSMANAGWRGYVFTNLGNLTTWDTPLAQ------YARDTRVSVGLAAAWN 110
               SDRF LGGPM++RGF   G+GPRA   +GG P GDALGGDI Y+ +AS+GFP   P +A  G RG VF N GNLTTWD  L +       A D RVSVG+   W 
Sbjct:   70 ARISDRFFLGGPMNVRGFNHKGIGPRASPLDGGVPQGDALGGDISYNGTASMGFPVPLPLLAALGLRGQVFANAGNLTTWDRLLDEKKWMKNLADDMRVSVGMGLVWG 177          
BLAST of mRNA_H-elongata_contig126848.1992.1 vs. uniprot
Match: A0A024G521_9STRA (Omp85 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G521_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.660e-27
Identity = 57/103 (55.34%), Postives = 70/103 (67.96%), Query Frame = 0
Query:    9 THFSDRFNLGGPMSLRGFPFYGVGPRAPKEEGGCPGGDALGGDIRYSASASLGFPXXXPSMANAGWRGYVFTNLGNLTTWDTPLAQ------YARDTRVSVGL 105
            +  SDRF LGGP+SLRGF F GVGPRA   +GG P GDALGGD+ Y+ASA +GFP   P +A  G RG VF ++GNLTTWD  L +         DTR+S+G+
Sbjct: 1417 SRISDRFFLGGPLSLRGFHFKGVGPRASPAQGGFPSGDALGGDVFYTASAHIGFPFPFPVLATLGLRGQVFGSIGNLTTWDRVLNKKRWMRNLVSDTRLSIGM 1519          
BLAST of mRNA_H-elongata_contig126848.1992.1 vs. uniprot
Match: F0W4E7_9STRA (Sorting and assembly machinery component 50 putativ n=10 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4E7_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.680e-27
Identity = 57/103 (55.34%), Postives = 71/103 (68.93%), Query Frame = 0
Query:    9 THFSDRFNLGGPMSLRGFPFYGVGPRAPKEEGGCPGGDALGGDIRYSASASLGFPXXXPSMANAGWRGYVFTNLGNLTTWDTPLAQ------YARDTRVSVGL 105
            +  SDRF LGGP+SLRGF + GVGPRA   +GG P GD+LGGD+ Y+ASA +GFP   P +A  G RG VF ++GNLTTWD  L +       A DTRVS+G+
Sbjct: 1522 SRISDRFFLGGPLSLRGFHYKGVGPRASPTQGGVPSGDSLGGDLFYTASAHVGFPFPFPMLAMLGLRGQVFGSIGNLTTWDRVLHKKRWMRNLANDTRVSIGM 1624          
BLAST of mRNA_H-elongata_contig126848.1992.1 vs. uniprot
Match: M4BJR2_HYAAE (Omp85 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJR2_HYAAE)

HSP 1 Score: 112 bits (281), Expect = 7.070e-27
Identity = 58/108 (53.70%), Postives = 67/108 (62.04%), Query Frame = 0
Query:    9 THFSDRFNLGGPMSLRGFPFYGVGPRAPKEEGGCPGGDALGGDIRYSASASLGFPXXXPSMANAGWRGYVFTNLGNLTTWDTPLAQ------YARDTRVSVGLAAAWN 110
               SDRF LGGPM++RGF   G+GPRA   +GG   GDALGGD+ Y  +AS+GFP   P  A  G RG VF N+GNLTTWD  L +       A DTRVSVGL   W 
Sbjct:  336 ARISDRFFLGGPMNVRGFNHKGIGPRASPLDGGVVQGDALGGDVSYRGTASMGFPVPLPLFAALGLRGQVFANVGNLTTWDRLLDEKKWMKNLADDTRVSVGLGLVWG 443          
BLAST of mRNA_H-elongata_contig126848.1992.1 vs. uniprot
Match: K3W6Z5_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W6Z5_GLOUD)

HSP 1 Score: 110 bits (275), Expect = 3.670e-26
Identity = 57/108 (52.78%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    9 THFSDRFNLGGPMSLRGFPFYGVGPRAPKEEGGCPGGDALGGDIRYSASASLGFPXXXPSMANAGWRGYVFTNLGNLTTWDTPLAQ------YARDTRVSVGLAAAWN 110
               SDRF LGGPMSLRGF   GVGPRA   +GG   GD+LGG++ Y+ SAS+GFP   P +A  G RG  F N GNLTTW   L +       A DTRVSVG+   W 
Sbjct:  300 ARISDRFFLGGPMSLRGFNHKGVGPRASPRDGGVAAGDSLGGELSYNGSASVGFPCPMPLLAMLGIRGQFFANAGNLTTWGRLLDEKKWMKNLADDTRVSVGMGLVWG 407          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126848.1992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C0_ECTSI1.140e-6383.19Sorting and Assembly Machinery 50kDa protein (N-te... [more]
A0A2D4BF57_PYTIN2.020e-2851.26Sorting and assembly machinery component 50 n=1 Ta... [more]
A0A2D4CD39_PYTIN5.010e-2851.26Sorting and assembly machinery component 50 n=1 Ta... [more]
A0A8K1CC02_PYTOL1.210e-2749.58Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484DQ43_BRELC2.320e-2750.93Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A3M6VD75_9STRA4.230e-2753.70Omp85 domain-containing protein n=2 Tax=Peronospor... [more]
A0A024G521_9STRA4.660e-2755.34Omp85 domain-containing protein n=1 Tax=Albugo can... [more]
F0W4E7_9STRA4.680e-2755.34Sorting and assembly machinery component 50 putati... [more]
M4BJR2_HYAAE7.070e-2753.70Omp85 domain-containing protein n=1 Tax=Hyaloperon... [more]
K3W6Z5_GLOUD3.670e-2652.78Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.160.50coord: 2..120
e-value: 5.3E-21
score: 77.3
NoneNo IPR availablePANTHERPTHR12815:SF18SORTING AND ASSEMBLY MACHINERY COMPONENT 50 HOMOLOGcoord: 10..112
IPR000184Bacterial surface antigen (D15)PFAMPF01103Bac_surface_Agcoord: 7..111
e-value: 7.4E-18
score: 65.1
IPR039910Surface antigen D15-likePANTHERPTHR12815SORTING AND ASSEMBLY MACHINERY SAM50 PROTEINcoord: 10..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig126848contigH-elongata_contig126848:72..1071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig126848.1992.1mRNA_H-elongata_contig126848.1992.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig126848 72..1071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig126848.1992.1 ID=prot_H-elongata_contig126848.1992.1|Name=mRNA_H-elongata_contig126848.1992.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
RPLGSCKRTHFSDRFNLGGPMSLRGFPFYGVGPRAPKEEGGCPGGDALGG
DIRYSASASLGFPFPFPSMANAGWRGYVFTNLGNLTTWDTPLAQYARDTR
VSVGLAAAWNFMGEVVFAYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000184Bac_surfAg_D15
IPR039910D15-like