prot_H-elongata_contig12680.1988.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12680.1988.1
Unique Nameprot_H-elongata_contig12680.1988.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
BLAST of mRNA_H-elongata_contig12680.1988.1 vs. uniprot
Match: D7G1T8_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T8_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 3.720e-42
Identity = 70/89 (78.65%), Postives = 79/89 (88.76%), Query Frame = 0
Query:   15 QVKILPTLVCFIDGIAVHSIIGFDGLTAGLPDDKLDEWPLSNLARELALAKVIVYSQHDTPEGSGPREKGSSFGMIRAGVNDGDCFDDD 103
            QVKILPT++CFIDG+AVH+IIGFDGLTAGLP DKLDEWPLSNLARELALAK I+YSQ D PEG+GPRE+G   G IRAG+NDGD  D+D
Sbjct:  228 QVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYSQRDAPEGTGPREQGGYTGAIRAGLNDGDFSDED 316          
BLAST of mRNA_H-elongata_contig12680.1988.1 vs. uniprot
Match: A0A835YQ77_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ77_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.380e-11
Identity = 39/89 (43.82%), Postives = 50/89 (56.18%), Query Frame = 0
Query:   15 QVKILPTLVCFIDGIAVHSIIGFDGLTAGLPDDKLDEWPLSNLARELALAKVIVYSQHDTPEGSGPREKGSSFGMIRAGVNDGDCFDDD 103
            QV++LP +V F DGI+V  I GF+GL         DEWP  NLA+ LALAK I Y+  D  +      K    G+IRAG  D +  D+D
Sbjct:  231 QVRVLPCVVIFRDGISVAQIQGFEGLNEEQEKGTEDEWPTGNLAKRLALAKAIDYTASDALD---QMRKAQVSGVIRAGFGDAELSDED 316          
BLAST of mRNA_H-elongata_contig12680.1988.1 vs. uniprot
Match: A0A482RU92_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU92_9ARCH)

HSP 1 Score: 57.4 bits (137), Expect = 2.070e-7
Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   16 VKILPTLVCFIDGIAVHSIIGFDGLTAGLPDDKLDEWPLSNLARELA----LAKVIVYSQHD 73
            ++ +PT+VCF+DGIA   ++GF+GLT GL +   DEWP   LAR L     L K +V  + +
Sbjct:  244 IRTMPTVVCFVDGIAQDKVVGFEGLTEGLEEGHEDEWPTVRLARLLVSKHMLRKDLVLDEEE 305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12680.1988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1T8_ECTSI3.720e-4278.65Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A835YQ77_9STRA1.380e-1143.82Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A482RU92_9ARCH2.070e-743.55Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12680contigH-elongata_contig12680:1479..2383 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12680.1988.1mRNA_H-elongata_contig12680.1988.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12680 86..2416 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12680.1988.1 ID=prot_H-elongata_contig12680.1988.1|Name=mRNA_H-elongata_contig12680.1988.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MHVYILLYLLPRATQVKILPTLVCFIDGIAVHSIIGFDGLTAGLPDDKLD
EWPLSNLARELALAKVIVYSQHDTPEGSGPREKGSSFGMIRAGVNDGDCF
DDDA*
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