prot_H-elongata_contig126354.1963.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig126354.1963.1
Unique Nameprot_H-elongata_contig126354.1963.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length158
Homology
BLAST of mRNA_H-elongata_contig126354.1963.1 vs. uniprot
Match: A0A2P4XWG1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XWG1_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.490e-16
Identity = 52/154 (33.77%), Postives = 78/154 (50.65%), Query Frame = 0
Query:    7 ALEAGLPSDAKTRLRDLLLGPLFDGFRRSLSGDPQARVEPLQVKLKVDADLSKVKARPRVYSPTKTSWLDEQFAQLADAGMVYENPQAMCENPDQAVLK--GNGYRLVCDFKAVNQQSEPVAAPPMLLEEQASAFARAALFMTVDLNQGYWQMP 158
            A+  G P +    LR +    +FD +R  L GDP A+V PL ++LK      K KARP  Y P    +L +  A+L   G VYEN ++   +    V K   N +R  CD++A+N+++EP+A    +L          A F   D  +G+WQ+P
Sbjct:  145 AISNGFPPERSNELRTVAF--MFDIWRLKLGGDPPAKVPPLLIRLKEGVKPQKCKARP--YPPHIREFLRDFNAELERMGWVYENTRSRWASAALPVRKPGSNEFRQACDYRALNEETEPIAGVMPILRVITEHVRGMAHFGLFDFLKGFWQLP 294          
BLAST of mRNA_H-elongata_contig126354.1963.1 vs. uniprot
Match: A0A671TR06_SPAAU (Ribonuclease H n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671TR06_SPAAU)

HSP 1 Score: 65.5 bits (158), Expect = 2.040e-9
Identity = 35/99 (35.35%), Postives = 50/99 (50.51%), Query Frame = 0
Query:   60 VKARPRVYSPTKTSWLDEQFAQLADAGMVYENPQAMCENPDQAVLKGNGYRLVCDFKAVNQQSEPVAAPPMLLEEQASAFARAALFMTVDLNQGYWQMP 158
            +K RP   SPTK   + EQ  ++  AG+V  +             K  G+R   DF+ VN  +E  A P   + E   + + AA+F T+DLN GYWQ+P
Sbjct: 1356 IKQRPYHMSPTKQIIVKEQLREMLTAGIVEPSHSGWASPVVLPPKKDGGHRFCADFRKVNATTETDAYPLPNINEILESLSGAAVFSTIDLNSGYWQVP 1454          
BLAST of mRNA_H-elongata_contig126354.1963.1 vs. uniprot
Match: A0A498L8Q1_LABRO (Ribonuclease H n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498L8Q1_LABRO)

HSP 1 Score: 63.5 bits (153), Expect = 5.150e-9
Identity = 54/156 (34.62%), Postives = 77/156 (49.36%), Query Frame = 0
Query:    3 AVDGALEAGLPSDAKTRLRDLLLGPLFDGFRRSLSGDPQARVEPLQVKLKVDADLSKVKARPRVYSPTKTSWLDEQFAQLADAGMVYENPQAMCENPDQAVLKGNGYRLVC-DFKAVNQQSEPVAAPPMLLEEQASAFARAALFMTVDLNQGYWQM 157
            AVDGA    LP D K +LR +L         R        R + LQ +L V   +  +K RP   SP+K + + EQ  ++  AG+V  +  A   +P   V K +G    C D++ VN  +E  A P   + E   + A AA+F T+DLN GYWQ+
Sbjct:   63 AVDGA---HLPPDGKQQLRRILESNCQVCTLRP------GRTDVLQHRLYVTHPVP-IKQRPYRMSPSKQAVVREQLEEMLKAGIVEPSHSAWA-SPVVLVPKKDGKMRFCVDYRKVNAITESDAYPIPNITEILESLAGAAIFSTIDLNSGYWQV 207          
BLAST of mRNA_H-elongata_contig126354.1963.1 vs. uniprot
Match: A0A8C2FG76_CYPCA (Ribonuclease H n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2FG76_CYPCA)

HSP 1 Score: 60.1 bits (144), Expect = 1.390e-7
Identity = 48/156 (30.77%), Postives = 76/156 (48.72%), Query Frame = 0
Query:    9 EAGLPSDAKTRLRDLLLGPLFDGFRRSLSGDPQA------RVEPLQVKLKVDADLSKVKARPRVYSPTKTSWLDEQFAQLADAGMVYENPQAMCENPDQAVLKGNGYRLVC-DFKAVNQQSEPVAAPPMLLEEQASAFARAALFMTVDLNQGYWQM 157
            EA LP+D K +LR +L              +PQ       R + LQ  + +   +  +K RP   SP K + +++Q  ++  AG+V E   +   +P   V K +G    C D++ VN  +E  A P   + E   + + AA+F T+DLN GYWQ+
Sbjct:   13 EAHLPADGKYQLRKVL------------EANPQVCALKPGRTDVLQHHIYLTQQVP-IKQRPYRMSPIKQAVVEKQLEEMLSAGIV-EPSHSGWASPVVLVPKKDGSLRFCVDYRKVNAITESDAYPLPNITEILESLSGAAIFSTIDLNSGYWQV 154          
BLAST of mRNA_H-elongata_contig126354.1963.1 vs. uniprot
Match: A0A6P6PD10_CARAU (activity-regulated cytoskeleton-associated protein isoform X1 n=1 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6PD10_CARAU)

HSP 1 Score: 58.5 bits (140), Expect = 4.770e-7
Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 0
Query:    4 VDGAL-EAGLPSDAKTRLRDLLLGPLFDGFRRSLSGDPQARVEPLQVKLKVDADLSKVKARPRVYSPTKTSWLDEQFAQLADAGMVYENPQAMCENPDQAVLKGNGYRLVCDFKAVNQQSEPVAAPPMLLEEQASAFARAALFMTVDLNQGYWQMP 158
            +D AL EA LP D + +LR LL     +  R   +  P  R   LQ  L     +  +K RP   +P K + + EQ  ++  A ++  +  A          K    R   D++ +N  +E  A P   + E   + + AA+F T+DLN GYWQ+P
Sbjct:  525 IDNALKEATLPHDEEIQLRHLL-----ESHRTVCTRRP-GRTTVLQHCLYTRHPVP-IKQRPYRLTPAKQAIVKEQIEEMLKADIIEPSYSAWASPVVLVPKKDGSLRFCVDYRKINALTESDAYPIPNITEILESLSDAAIFSTLDLNCGYWQVP 673          
BLAST of mRNA_H-elongata_contig126354.1963.1 vs. uniprot
Match: A0A6P6QVS0_CARAU (uncharacterized protein LOC113114602 n=3 Tax=Cyprininae TaxID=2743694 RepID=A0A6P6QVS0_CARAU)

HSP 1 Score: 57.4 bits (137), Expect = 1.300e-6
Identity = 35/99 (35.35%), Postives = 53/99 (53.54%), Query Frame = 0
Query:   60 VKARPRVYSPTKTSWLDEQFAQLADAGMVYENPQAMCENPDQAVLKGNG-YRLVCDFKAVNQQSEPVAAPPMLLEEQASAFARAALFMTVDLNQGYWQM 157
            +K RP   SP K   L+EQ  ++   G+V  +  A   +P   V K +G +R   D++ VN  +E  A P   + E   + + AA+F T+DLN GYWQ+
Sbjct:  822 IKQRPYRLSPLKQIALEEQLDEMLMQGIVEPSHSAWA-SPVVLVPKKDGKFRFCVDYRKVNSVTESDAYPLPNITEILESLSGAAIFSTIDLNSGYWQV 919          
BLAST of mRNA_H-elongata_contig126354.1963.1 vs. uniprot
Match: UPI001E277322 (uncharacterized protein LOC123686605 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E277322)

HSP 1 Score: 56.2 bits (134), Expect = 3.190e-6
Identity = 42/148 (28.38%), Postives = 69/148 (46.62%), Query Frame = 0
Query:   12 LPSDAKTRLRDLLLGPLFDGFRRSLSGDPQARVEPLQVKLKVDADLSKVKARPRVYSPTKTSWLDEQFAQLADAGMVYENPQAMCENPDQAVLKGNG-YRLVCDFKAVNQQSEPVAAPPMLLEEQASAFARAALFMTVDLNQGYWQMP 158
            L  + +TRL   L   L  G    LSG      + ++ K+++   +  +K R R  +P      D++  ++ +  ++ E  ++   +P   V K +G YR   DF+AVN+ S   A P   +        RA    T+DL QGYWQ+P
Sbjct:  742 LTGEQRTRLESFLTEEL--GKFTQLSGT----TDLIEHKIRLKPGIEPIKQRYRPQNPKMQEIFDQEVDRMLEERVI-EPSKSPWSSPVVLVKKKDGKYRFCIDFRAVNEASVKDAYPLPYISGILDKLRRARYISTIDLKQGYWQIP 882          
BLAST of mRNA_H-elongata_contig126354.1963.1 vs. uniprot
Match: UPI00193DA2D6 (uncharacterized protein K02A2.6-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193DA2D6)

HSP 1 Score: 55.1 bits (131), Expect = 7.770e-6
Identity = 36/112 (32.14%), Postives = 58/112 (51.79%), Query Frame = 0
Query:   48 QVKLKVDADLSKVKARPRVYSPTKTSWLDEQFAQLADAGMVYENPQAMCENPDQAVLKGNG-YRLVCDFKAVNQQSEPVAAPPMLLEEQASAFARAALFMTVDLNQGYWQMP 158
            Q++LK D  + K + RPR  +P   S +DE+  ++ +AG++  +  A   +P   V K +G +R   DF+ VN+ +E  A P   +              T+DL QGYWQ+P
Sbjct:  121 QIRLKTDVPI-KQRYRPR--NPAMQSIIDEEVRKMEEAGIIEPSTSAW-SSPVVIVRKKDGKHRFCIDFRKVNEVTERDAYPLPQIPATLDKLRGGRYLTTLDLQQGYWQIP 228          
BLAST of mRNA_H-elongata_contig126354.1963.1 vs. uniprot
Match: UPI001E276687 (uncharacterized protein LOC123686607 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E276687)

HSP 1 Score: 54.3 bits (129), Expect = 1.490e-5
Identity = 33/113 (29.20%), Postives = 56/113 (49.56%), Query Frame = 0
Query:   47 LQVKLKVDADLSKVKARPRVYSPTKTSWLDEQFAQLADAGMVYENPQAMCENPDQAVLKGNG-YRLVCDFKAVNQQSEPVAAPPMLLEEQASAFARAALFMTVDLNQGYWQMP 158
            ++ K+K+   +  +K R R  +P      D++  ++ +  ++ E  ++   +P   V K +G YR   DF+AVN+ S   A P   +        RA    T+DL QGYWQ+P
Sbjct: 1017 IEHKIKLKPGIEPIKQRYRPQNPKMQEIFDQEVDRMLEERVI-EPSKSPWSSPVVLVKKKDGKYRFCIDFRAVNEASVKDAYPLPYISGILDKLRRARYISTIDLKQGYWQIP 1128          
BLAST of mRNA_H-elongata_contig126354.1963.1 vs. uniprot
Match: A0A8C1KLQ8_CYPCA (Uncharacterized protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1KLQ8_CYPCA)

HSP 1 Score: 54.3 bits (129), Expect = 1.510e-5
Identity = 30/98 (30.61%), Postives = 47/98 (47.96%), Query Frame = 0
Query:   61 KARPRVYSPTKTSWLDEQFAQLADAGMVYENPQAMCENPDQAVLKGNGYRLVCDFKAVNQQSEPVAAPPMLLEEQASAFARAALFMTVDLNQGYWQMP 158
            K RP    P K + + +Q  ++  AG++  +  A          K    R   D++ VN  +E  A P   + E   + + AA+F T+DLN GYWQ+P
Sbjct:  853 KQRPYRLPPAKQAIVKDQIEEMLKAGIIEPSYSAWASPVVLVPKKDGSLRFCVDYRKVNALTESDAYPIPNITEILESLSGAAIFSTLDLNCGYWQVP 950          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126354.1963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2P4XWG1_9STRA5.490e-1633.77Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A671TR06_SPAAU2.040e-935.35Ribonuclease H n=1 Tax=Sparus aurata TaxID=8175 Re... [more]
A0A498L8Q1_LABRO5.150e-934.62Ribonuclease H n=1 Tax=Labeo rohita TaxID=84645 Re... [more]
A0A8C2FG76_CYPCA1.390e-730.77Ribonuclease H n=1 Tax=Cyprinus carpio TaxID=7962 ... [more]
A0A6P6PD10_CARAU4.770e-730.13activity-regulated cytoskeleton-associated protein... [more]
A0A6P6QVS0_CARAU1.300e-635.35uncharacterized protein LOC113114602 n=3 Tax=Cypri... [more]
UPI001E2773223.190e-628.38uncharacterized protein LOC123686605 n=1 Tax=Harmo... [more]
UPI00193DA2D67.770e-632.14uncharacterized protein K02A2.6-like n=1 Tax=Solen... [more]
UPI001E2766871.490e-529.20uncharacterized protein LOC123686607 n=1 Tax=Harmo... [more]
A0A8C1KLQ8_CYPCA1.510e-530.61Uncharacterized protein n=1 Tax=Cyprinus carpio Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 49..158
e-value: 2.2E-12
score: 48.8
NoneNo IPR availableGENE3D3.30.70.270coord: 127..154
e-value: 2.2E-12
score: 48.8
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 49..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig126354contigH-elongata_contig126354:790..1263 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig126354.1963.1mRNA_H-elongata_contig126354.1963.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig126354 763..1263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig126354.1963.1 ID=prot_H-elongata_contig126354.1963.1|Name=mRNA_H-elongata_contig126354.1963.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp
MAAVDGALEAGLPSDAKTRLRDLLLGPLFDGFRRSLSGDPQARVEPLQVK
LKVDADLSKVKARPRVYSPTKTSWLDEQFAQLADAGMVYENPQAMCENPD
QAVLKGNGYRLVCDFKAVNQQSEPVAAPPMLLEEQASAFARAALFMTVDL
NQGYWQMP
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