prot_H-elongata_contig126180.1954.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig126180.1954.1
Unique Nameprot_H-elongata_contig126180.1954.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
BLAST of mRNA_H-elongata_contig126180.1954.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.080e-12
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0
Query:   15 PAPTEDLEPVDVSAEATVIVDAPLYDTRLSNDGGCDPAGCSGGLTRDGNRVTADSRWSCAPELGSSGSTCSITYSL 90
            P+P +     ++     V   A L+D  L  D GCDP+GC+ GLTRDG+  T+ SRWSCAP+LG  G +C+I+Y L
Sbjct:  359 PSPEQLFAAKEIDEIGAVTTTATLFDPSLLADNGCDPSGCTAGLTRDGDYATS-SRWSCAPKLGGDGDSCTISYDL 433          
BLAST of mRNA_H-elongata_contig126180.1954.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 3.410e-11
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   29 EATVIVDAPLYDTRLSNDGGCDPAGCSGGLTRDGNRVTADSRWSCAPELGSSGSTCSITYSL 90
            + TV   A L+D  L+ D GCDPAGC+  LTRDG+   A SRWSCA  LG  G+ CSI+Y L
Sbjct:  248 DTTVTTTADLFDPALAIDNGCDPAGCTAALTRDGDTGDA-SRWSCATNLGGEGAVCSISYDL 308          
BLAST of mRNA_H-elongata_contig126180.1954.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 8.760e-11
Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 0
Query:   20 DLEPVDVSAEATVIVDAPLYDTRLSNDGGCDPAGCSGGLTRDGNRVTADSRWSCAPELGSSGSTCSITYSL 90
            D   V+  +   V   + L+D RL +  GCDPAGC+  LTRDG+ V+ +SRWSCAP LG    TCSI+Y L
Sbjct:  180 DTTEVEAGSLGIVTATSALFDPRLGDSNGCDPAGCTAELTRDGD-VSDESRWSCAPSLGG---TCSISYDL 246          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126180.1954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KL74_9PHAE2.080e-1246.05F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
D7FZZ4_ECTSI3.410e-1154.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFA6_9PHAE8.760e-1149.30F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig126180contigH-elongata_contig126180:96..992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig126180.1954.1mRNA_H-elongata_contig126180.1954.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig126180 96..992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig126180.1954.1 ID=prot_H-elongata_contig126180.1954.1|Name=mRNA_H-elongata_contig126180.1954.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
MIVTSGSTLPPSPTPAPTEDLEPVDVSAEATVIVDAPLYDTRLSNDGGCD
PAGCSGGLTRDGNRVTADSRWSCAPELGSSGSTCSITYSLSSS
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