prot_H-elongata_contig126146.1951.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig126146.1951.1
Unique Nameprot_H-elongata_contig126146.1951.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig126146.1951.1 vs. uniprot
Match: UPI00148A67FC (zinc finger BED domain-containing protein 1-like n=2 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A67FC)

HSP 1 Score: 68.2 bits (165), Expect = 1.030e-11
Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    2 LGWWPKAAQVYPHVATLARKCLAVQASFVASERVFSAGGLIATKKRNHLSEDRVADIVFLNDNIKY 67
            L WW K +  +P ++ LA+K LA+ AS V+SERVFS GG I +KKR  LS   V   +FLN N+KY
Sbjct:  601 LEWWKKNSLFFPRISILAKKFLAIPASSVSSERVFSLGGQIVSKKRCRLSHSNVDLFIFLNKNMKY 666          
BLAST of mRNA_H-elongata_contig126146.1951.1 vs. uniprot
Match: A0A6G0VGT2_APHCR (Zinc finger BED domain-containing protein 1-like n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VGT2_APHCR)

HSP 1 Score: 63.5 bits (153), Expect = 1.490e-11
Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 0
Query:    1 PLGWWPKAAQVYPHVATLARKCLAVQASFVASERVFSAGGLIATKKRNHLSEDRVADIVFLNDNIKYDP 69
            PL WW      YP ++ LA K L VQA+ VASERVFS GG I T  R+ LS D  + +++L  N  Y P
Sbjct:   22 PLEWWNMNKDTYPMLSLLAEKNLTVQATSVASERVFSKGGCILTDLRSSLSNDHASQLIYLTMNKDYVP 90          
BLAST of mRNA_H-elongata_contig126146.1951.1 vs. uniprot
Match: UPI000B92F964 (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B92F964)

HSP 1 Score: 66.6 bits (161), Expect = 3.550e-11
Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0
Query:    1 PLGWWPKAAQVYPHVATLARKCLAVQASFVASERVFSAGGLIATKKRNHLSEDRVADIVFLNDNIKYDP 69
            PL WW      YP ++ LA KCL VQA+ VASERVFS GG I T  R+ LS +  + +++L  N  Y P
Sbjct:  455 PLEWWNMNKDTYPMLSLLAEKCLTVQATSVASERVFSKGGCILTDLRSSLSNEHASQLIYLTMNKDYVP 523          
BLAST of mRNA_H-elongata_contig126146.1951.1 vs. uniprot
Match: J9LJT7_ACYPI (BED-type domain-containing protein n=2 Tax=Macrosiphini TaxID=33386 RepID=J9LJT7_ACYPI)

HSP 1 Score: 66.6 bits (161), Expect = 3.580e-11
Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    1 PLGWWPKAAQVYPHVATLARKCLAVQASFVASERVFSAGGLIATKKRNHLSEDRVADIVFLNDNIKYDP 69
            PL WW   + +YP +  LARK L +QA+ VASERVFS GGLI T  R  L+ D  + +VFL+ N  + P
Sbjct:  573 PLKWWNLNSSMYPFLTILARKFLTIQATSVASERVFSKGGLIVTDHRATLTNDHASQLVFLSANKAHVP 641          
BLAST of mRNA_H-elongata_contig126146.1951.1 vs. uniprot
Match: R7UJ35_CAPTE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UJ35_CAPTE)

HSP 1 Score: 61.6 bits (148), Expect = 4.620e-11
Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = 0
Query:    1 PLGWWPKAAQVYPHVATLARKCLAVQASFVASERVFSAGGLIATKKRNHLSEDRVADIVFLNDNI 65
            PL WW      YP VA +AR  LAV AS V +ER+FS GG I T KR  L+   V  ++FL  N+
Sbjct:    4 PLKWWAAKEAAYPSVAVIARHILAVPASSVPAERIFSLGGNIVTNKRTKLTSSNVDSLIFLAKNM 68          
BLAST of mRNA_H-elongata_contig126146.1951.1 vs. uniprot
Match: A0A6G0VQN5_APHCR (Zinc finger BED domain-containing protein 1-like (Fragment) n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VQN5_APHCR)

HSP 1 Score: 66.2 bits (160), Expect = 4.880e-11
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    1 PLGWWPKAAQVYPHVATLARKCLAVQASFVASERVFSAGGLIATKKRNHLSEDRVADIVFLNDNIKYDP 69
            PL WW      YP ++ LA+K L VQA+ VASERVFS GGL+ T  R  L+ D V+++V+L+ N  + P
Sbjct:  524 PLKWWSLNCTTYPFLSILAKKYLTVQATSVASERVFSKGGLVVTDHRASLTNDHVSELVYLSMNKAHVP 592          
BLAST of mRNA_H-elongata_contig126146.1951.1 vs. uniprot
Match: UPI00148A2F2A (zinc finger BED domain-containing protein 4-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A2F2A)

HSP 1 Score: 65.9 bits (159), Expect = 5.760e-11
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    2 LGWWPKAAQVYPHVATLARKCLAVQASFVASERVFSAGGLIATKKRNHLSEDRVADIVFLNDNIKY 67
            L WW K +  +P ++ LA+  LA+ AS V+SERVFS GG I +KKR  LS   V   +FLN N+KY
Sbjct:  282 LEWWKKNSLFFPRISILAKNFLAIPASSVSSERVFSLGGQILSKKRCRLSHSNVDLFIFLNKNMKY 347          
BLAST of mRNA_H-elongata_contig126146.1951.1 vs. uniprot
Match: A0A8B8D8W3_CRAVI (zinc finger BED domain-containing protein 1-like n=4 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8D8W3_CRAVI)

HSP 1 Score: 65.5 bits (158), Expect = 9.140e-11
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    2 LGWWPKAAQVYPHVATLARKCLAVQASFVASERVFSAGGLIATKKRNHLSEDRVADIVFLNDNIKY 67
            L WW K +  +P ++ LA+K LA+ AS V+SE VFS GG I +KKR  LS + V   +FLN N+KY
Sbjct:  581 LEWWKKNSAFFPRLSVLAKKFLAIPASSVSSEIVFSLGGQIVSKKRCRLSHNNVDLFIFLNKNMKY 646          
BLAST of mRNA_H-elongata_contig126146.1951.1 vs. uniprot
Match: A0A6G0VZT8_APHCR (Zinc finger BED domain-containing protein 1-like n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VZT8_APHCR)

HSP 1 Score: 65.1 bits (157), Expect = 1.250e-10
Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    1 PLGWWPKAAQVYPHVATLARKCLAVQASFVASERVFSAGGLIATKKRNHLSEDRVADIVFLNDNIKYDP 69
            PL WW   + +YP +  LA+K L +QA+ VASERVFS GGLI T  R  L+ D  + +VFL+ N  + P
Sbjct:  537 PLKWWNLNSTMYPFLTILAKKFLTIQATSVASERVFSKGGLIVTDHRATLTNDHTSQLVFLSANKAHVP 605          
BLAST of mRNA_H-elongata_contig126146.1951.1 vs. uniprot
Match: UPI0019555042 (zinc finger BED domain-containing protein 4-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019555042)

HSP 1 Score: 64.3 bits (155), Expect = 1.750e-10
Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 0
Query:    1 PLGWWPKAAQVYPHVATLARKCLAVQASFVASERVFSAGGLIATKKRNHLSEDRVADIVFLNDNIK 66
            PL WW      YPH+A LA+  LAV A+ V SERVFS  G I T  R+ LS D V  ++FL  N+K
Sbjct:  237 PLEWWRTNEPTYPHIAKLAKHYLAVPATSVPSERVFSTAGDIVTASRSSLSADNVDKLIFLTKNMK 302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126146.1951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00148A67FC1.030e-1151.52zinc finger BED domain-containing protein 1-like n... [more]
A0A6G0VGT2_APHCR1.490e-1147.83Zinc finger BED domain-containing protein 1-like n... [more]
UPI000B92F9643.550e-1147.83zinc finger BED domain-containing protein 1-like n... [more]
J9LJT7_ACYPI3.580e-1149.28BED-type domain-containing protein n=2 Tax=Macrosi... [more]
R7UJ35_CAPTE4.620e-1147.69Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
A0A6G0VQN5_APHCR4.880e-1147.83Zinc finger BED domain-containing protein 1-like (... [more]
UPI00148A2F2A5.760e-1150.00zinc finger BED domain-containing protein 4-like n... [more]
A0A8B8D8W3_CRAVI9.140e-1150.00zinc finger BED domain-containing protein 1-like n... [more]
A0A6G0VZT8_APHCR1.250e-1047.83Zinc finger BED domain-containing protein 1-like n... [more]
UPI00195550421.750e-1050.00zinc finger BED domain-containing protein 4-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 1..65
e-value: 7.6E-14
score: 51.3
NoneNo IPR availablePANTHERPTHR47611FAMILY NOT NAMEDcoord: 1..65
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig126146contigH-elongata_contig126146:1263..1475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig126146.1951.1mRNA_H-elongata_contig126146.1951.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig126146 1263..1475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig126146.1951.1 ID=prot_H-elongata_contig126146.1951.1|Name=mRNA_H-elongata_contig126146.1951.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
PLGWWPKAAQVYPHVATLARKCLAVQASFVASERVFSAGGLIATKKRNHL
SEDRVADIVFLNDNIKYDPW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf