prot_H-elongata_contig12614.1949.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12614.1949.1
Unique Nameprot_H-elongata_contig12614.1949.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length478
Homology
BLAST of mRNA_H-elongata_contig12614.1949.1 vs. uniprot
Match: A0A6H5KZM3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZM3_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 1.060e-93
Identity = 227/499 (45.49%), Postives = 293/499 (58.72%), Query Frame = 0
Query:    1 RREESAARAQRRRDGNRXXXXXXDRRRSAIAEATRAKLEGPSRAEMKA--QARELERRQQFFLFVVAVVGATVRWRNDWKERKLLMAKISETIAAGKETKDSATDKFEASAVCVQRFFRHRKG--GTLSGDHSNKGLRLHPGVNHVRCLKRWIQKLGKRWKCRRRGRAVIIHEFLREAKLTQNIKAIYRFRKRVIRCQVYAKGFLNVTRARLELLDLYFHRCEERLRGRLVERVRQQVKDEAAVDLEIHRQMHHHPV----------VKVDHRRWGEKTAARSGTVTGRSNDDV-KLMDALAKMRLKSALDKLETRFAHPEVKSRLLDGLLTKARVRVEHQVNIRLTNKQRKG--RDRSGDVSRSEKCRRQRREICDGIMLAEAVFTVDDARDLLSKRRRSVKVPGVGRWGDDSSRVT----ATVNIAGNFTGAISSSAGVETTGSGDGKERRSSDKXXXXXXXXAATLTRVKPVLLLRAVTESIMCQLVMAAWEQSST 478
            RREE+  RAQR+R+ N XXXXXX+RRR A AEATR K EGPS AE++A  +A  LE+RQ++FLF V  + + +RWRNDWKERK  MAK +E +    E K+S  D FEAS   VQRF R R+G  G   G  +  G R     N +RCLK WI +    WK RRR   VII++FL++A+L+QNIKAIYRFR++V+RCQVY KG   VTR RL LL L+F +CE RLRGRL ERVRQQV++EAA DLE+HRQ+                                  TG  +D V +LM+ +A +RLKSA ++LE R A P+VK RLL+GLL K  VR  HQ  ++L++  R G      GD    +   R RR    G+ L EA+FTVDDAR+LL++                   +T    A+ N +G   GA  S+  V   G+G       S              TRV P+LLL++V E++MCQLV+ AWEQSS+
Sbjct:  221 RREEATTRAQRKREANXXXXXXXERRRLATAEATRIKHEGPSLAEVRALEEAALLEKRQRYFLFAVVAIHSAIRWRNDWKERKYKMAKFAEALVGLIEQKESQ-DVFEASVARVQRFVRRRQGAPGVAGGAAATAGDRSGRR-NFIRCLKAWIPRAHGTWKRRRREGGVIIYDFLKDARLSQNIKAIYRFRRKVMRCQVYVKGVSVVTRDRLLLLGLFFSQCEGRLRGRLAERVRQQVQEEAAADLEVHRQLMRPSTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGEDDGVSELMETVAALRLKSAQEELEMRSARPDVKRRLLEGLLGK--VRAAHQSRMQLSSGGRGGDXXXXXGDARIGKGPGRNRR----GVFLPEALFTVDDARELLTRSPXXXXXXXXXXXXXXXXGLTNGNQASPNGSGELPGAPYSTVAVSRPGTGGXXXXXVSKSDFRPN-------TRVPPMLLLKSVPEAVMCQLVLTAWEQSSS 704          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12614.1949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KZM3_9PHAE1.060e-9345.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12614contigH-elongata_contig12614:427..3918 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12614.1949.1mRNA_H-elongata_contig12614.1949.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12614 427..3918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12614.1949.1 ID=prot_H-elongata_contig12614.1949.1|Name=mRNA_H-elongata_contig12614.1949.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=478bp
RREESAARAQRRRDGNRERRRRMDRRRSAIAEATRAKLEGPSRAEMKAQA
RELERRQQFFLFVVAVVGATVRWRNDWKERKLLMAKISETIAAGKETKDS
ATDKFEASAVCVQRFFRHRKGGTLSGDHSNKGLRLHPGVNHVRCLKRWIQ
KLGKRWKCRRRGRAVIIHEFLREAKLTQNIKAIYRFRKRVIRCQVYAKGF
LNVTRARLELLDLYFHRCEERLRGRLVERVRQQVKDEAAVDLEIHRQMHH
HPVVKVDHRRWGEKTAARSGTVTGRSNDDVKLMDALAKMRLKSALDKLET
RFAHPEVKSRLLDGLLTKARVRVEHQVNIRLTNKQRKGRDRSGDVSRSEK
CRRQRREICDGIMLAEAVFTVDDARDLLSKRRRSVKVPGVGRWGDDSSRV
TATVNIAGNFTGAISSSAGVETTGSGDGKERRSSDKAAAAAAATAATLTR
VKPVLLLRAVTESIMCQLVMAAWEQSST
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