prot_H-elongata_contig12609.1942.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12609.1942.1
Unique Nameprot_H-elongata_contig12609.1942.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
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BLAST of mRNA_H-elongata_contig12609.1942.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 1.630e-6
Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:    3 GEIVWVEEGDFTTSTTTSRFSVSLTDYDPNCGG 35
            GE+VW+EEGDF +ST +  F+VSL+ YDP CGG
Sbjct:  532 GEVVWIEEGDFISSTQSDTFAVSLSVYDPTCGG 564
[Close]
BLAST of mRNA_H-elongata_contig12609.1942.1 vs. uniprot
Match: D7G5D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D6_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 1.630e-6
Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:    3 GEIVWVEEGDFTTSTTTSRFSVSLTDYDPNCGG 35
            GE+VW+EEGDF +ST +  F+VSL+ YDP CGG
Sbjct:  406 GEVVWIEEGDFISSTQSDTFAVSLSVYDPTCGG 438
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12609.1942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3X5_ECTSI1.630e-663.64VWFD domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G5D6_ECTSI1.630e-663.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12609contigH-elongata_contig12609:4919..5050 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12609.1942.1mRNA_H-elongata_contig12609.1942.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12609 4479..5299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12609.1942.1 ID=prot_H-elongata_contig12609.1942.1|Name=mRNA_H-elongata_contig12609.1942.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
MFGEIVWVEEGDFTTSTTTSRFSVSLTDYDPNCGGSFAATITT*
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