prot_H-elongata_contig126049.1939.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig126049.1939.1
Unique Nameprot_H-elongata_contig126049.1939.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length48
Homology
BLAST of mRNA_H-elongata_contig126049.1939.1 vs. uniprot
Match: D7G6Y8_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y8_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 2.100e-20
Identity = 42/47 (89.36%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 ARVTDAVQFGDGFGLAGAVIVHLMGQRHQFELLDFSYHLLKVHNFER 47
            ARVTDAVQFGDGFGLAGAVI+HL+GQRHQFELLDFSYH+L V+NFER
Sbjct: 1228 ARVTDAVQFGDGFGLAGAVIMHLLGQRHQFELLDFSYHVLNVNNFER 1274          
BLAST of mRNA_H-elongata_contig126049.1939.1 vs. uniprot
Match: A0A6H5KQX8_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX8_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 9.970e-20
Identity = 41/47 (87.23%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 ARVTDAVQFGDGFGLAGAVIVHLMGQRHQFELLDFSYHLLKVHNFER 47
            ARVTDAVQFGDGFGLAGAVI+HL+GQRHQFELLDFSYH+L V++FER
Sbjct:  934 ARVTDAVQFGDGFGLAGAVIMHLLGQRHQFELLDFSYHVLNVNSFER 980          
BLAST of mRNA_H-elongata_contig126049.1939.1 vs. uniprot
Match: A0A7S1UBW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBW1_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.640e-10
Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    3 VTDAVQFGDGFGLAGAVIVHLMGQRHQFELLDFSYHLLKVHNFE 46
            VT+ V+FG GF +AG + VHL+GQRH+FELLDFSYH+  V + E
Sbjct:  591 VTNEVEFGHGFAIAGCLFVHLLGQRHKFELLDFSYHMCNVADHE 634          
BLAST of mRNA_H-elongata_contig126049.1939.1 vs. uniprot
Match: A0A7S2F5C9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5C9_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.990e-7
Identity = 23/44 (52.27%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    3 VTDAVQFGDGFGLAGAVIVHLMGQRHQFELLDFSYHLLKVHNFE 46
            V D   FG GF LAG +++HL+  + +FELLD+S H+L+VH FE
Sbjct:  698 VADQECFGHGFALAGNLVIHLLDVKSRFELLDYSLHVLRVHEFE 741          
BLAST of mRNA_H-elongata_contig126049.1939.1 vs. uniprot
Match: A0A7S3ETQ6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ETQ6_9EUKA)

HSP 1 Score: 52.4 bits (124), Expect = 1.280e-6
Identity = 20/41 (48.78%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    2 RVTDAVQFGDGFGLAGAVIVHLMGQRHQFELLDFSYHLLKV 42
            ++ +++ FGDG  +AGA+ +H +GQRH+FEL DFS H+  V
Sbjct:  186 QIDNSMLFGDGVPMAGALFLHFLGQRHRFELFDFSQHVFSV 226          
BLAST of mRNA_H-elongata_contig126049.1939.1 vs. uniprot
Match: A0A267GL69_9PLAT (Cytoplasmic FMR1-interacting protein n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GL69_9PLAT)

HSP 1 Score: 51.6 bits (122), Expect = 2.680e-6
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    9 FGDGFGLAGAVIVHLMGQRHQFELLDFSYHLLKVHNFER 47
            FG+G   AGA ++ L+GQ  +FELLDFSYHLL+V+ F++
Sbjct: 1189 FGEGLQWAGAALLVLLGQERRFELLDFSYHLLRVNKFDQ 1227          
BLAST of mRNA_H-elongata_contig126049.1939.1 vs. uniprot
Match: UPI001EAF7978 (cytoplasmic FMR1-interacting protein 1 homolog n=1 Tax=Oncorhynchus gorbuscha TaxID=8017 RepID=UPI001EAF7978)

HSP 1 Score: 50.4 bits (119), Expect = 3.010e-6
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    9 FGDGFGLAGAVIVHLMGQRHQFELLDFSYHLLKV 42
            FGDG   AG +I+ L+GQ+ +F++LDFSYHLLKV
Sbjct:  107 FGDGLHWAGCMIISLLGQQRRFDILDFSYHLLKV 140          
BLAST of mRNA_H-elongata_contig126049.1939.1 vs. uniprot
Match: UPI00094F0111 (cytoplasmic FMR1-interacting protein 1 homolog n=2 Tax=Percomorphaceae TaxID=1489872 RepID=UPI00094F0111)

HSP 1 Score: 50.4 bits (119), Expect = 4.330e-6
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    9 FGDGFGLAGAVIVHLMGQRHQFELLDFSYHLLKV 42
            FGDG   AG +I+ L+GQ+ +F++LDFSYHLLKV
Sbjct:  101 FGDGLHWAGCLIISLLGQQRRFDILDFSYHLLKV 134          
BLAST of mRNA_H-elongata_contig126049.1939.1 vs. uniprot
Match: A0A8C4AVH4_9TELE (Cytoplasmic FMR1-interacting protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4AVH4_9TELE)

HSP 1 Score: 50.8 bits (120), Expect = 5.010e-6
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    9 FGDGFGLAGAVIVHLMGQRHQFELLDFSYHLLKV 42
            FGDG   AG +I+ L+GQ+ +F++LDFSYHLLKV
Sbjct: 1155 FGDGLNWAGCMIITLLGQQRRFDILDFSYHLLKV 1188          
BLAST of mRNA_H-elongata_contig126049.1939.1 vs. uniprot
Match: UPI001EAF22B3 (cytoplasmic FMR1-interacting protein 1 homolog n=1 Tax=Oncorhynchus gorbuscha TaxID=8017 RepID=UPI001EAF22B3)

HSP 1 Score: 50.4 bits (119), Expect = 6.270e-6
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    9 FGDGFGLAGAVIVHLMGQRHQFELLDFSYHLLKV 42
            FGDG   AG +I+ L+GQ+ +F++LDFSYHLLKV
Sbjct:  173 FGDGLHWAGCMIISLLGQQRRFDILDFSYHLLKV 206          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126049.1939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Y8_ECTSI2.100e-2089.36UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KQX8_9PHAE9.970e-2087.23UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S1UBW1_9STRA1.640e-1061.36Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2F5C9_9STRA2.990e-752.27Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ETQ6_9EUKA1.280e-648.78Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A267GL69_9PLAT2.680e-656.41Cytoplasmic FMR1-interacting protein n=3 Tax=Macro... [more]
UPI001EAF79783.010e-661.76cytoplasmic FMR1-interacting protein 1 homolog n=1... [more]
UPI00094F01114.330e-661.76cytoplasmic FMR1-interacting protein 1 homolog n=2... [more]
A0A8C4AVH4_9TELE5.010e-661.76Cytoplasmic FMR1-interacting protein n=1 Tax=Denti... [more]
UPI001EAF22B36.270e-661.76cytoplasmic FMR1-interacting protein 1 homolog n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008081Cytoplasmic FMR1-interactingPFAMPF05994FragX_IPcoord: 6..46
e-value: 3.4E-11
score: 42.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig126049contigH-elongata_contig126049:52..195 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig126049.1939.1mRNA_H-elongata_contig126049.1939.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig126049 52..195 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig126049.1939.1 ID=prot_H-elongata_contig126049.1939.1|Name=mRNA_H-elongata_contig126049.1939.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=48bp
ARVTDAVQFGDGFGLAGAVIVHLMGQRHQFELLDFSYHLLKVHNFER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008081Cytoplasmic_FMR1-int