prot_H-elongata_contig125743.1921.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig125743.1921.1
Unique Nameprot_H-elongata_contig125743.1921.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length313
Homology
BLAST of mRNA_H-elongata_contig125743.1921.1 vs. uniprot
Match: A0A6G0N8R7_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0N8R7_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.920e-46
Identity = 114/332 (34.34%), Postives = 161/332 (48.49%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDNDGRIKKYKCRL-------------------LDVDMAYLEAEMEEGIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWQKKFGIELEAKGFQRSQVDPCVF-RVILHGIVVXXXXXXVDDMLVASATKRDEEQAVMDLCSCFPVKDMGEASYYLGCHTTQDRNAGTPKFDQHQYIQTVKERFG---VTKTSIPSAAGRKALSKSDSPQTDAEVEERRQIPYRKIVEALMWAGTMTRPDISFAAHQQAKFNDNPGPTHWKAAQKALQYLWHTRDLGITYGG 311
            +A AS +  QW+ A+  E+      G W +V R      +G R VF +K D  GR+ +YK RL                   LD D A+L +E+++ +Y+E+P    ++R     L KA+YGL  A   W K         GF+    D CV+ +   +G +       VDDM++A+ T  +       L + F +K++G A + LG     D  AGT K    +YI  V E FG         P AAG K LSK+ SP TDAE    R  PYR ++  L++  T TRPDI+F   Q ++F +NP   HW AA + L+YL  T   GI Y G
Sbjct:  509 QAMASDDAEQWREAMDAELLSHERNGTWTLVPRGTASRTIGCRWVFAKKRDQYGRVVRYKARLVAKGFKQKYGIDFFETYSPLDADTAFLNSELKDRVYMEVPFGIENARGYQYQLNKAIYGLKQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYVCLY--VDDMIIAAKTSEEIRDVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKPTRYIDDVVEHFGQENAKPVDNPCAAGLK-LSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPEKQHWNAAVRVLRYLKSTLQHGIIYHG 837          
BLAST of mRNA_H-elongata_contig125743.1921.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU)

HSP 1 Score: 172 bits (436), Expect = 1.340e-44
Identity = 113/356 (31.74%), Postives = 171/356 (48.03%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDNDGRIKKYKCRLL------------------------------------------DVDMAYLEAEMEEGIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWQKKFGIELEAK-GFQRSQVDPCVF-RVILHGIVVXXXXXXVDDMLVASATKRDEEQAVMDLCSCFPVKDMGEASYYLGCHTTQDRNAGTPKFDQHQYIQTVKERFGVTKTSIPSAAGRKALSKSDSPQTDAEVEERRQIPYRKIVEALMWAGTMTRPDISFAAHQQAKFNDNPGPTHWKAAQKALQYLWHTRDLGITYGGE 312
            + EAQA+ EWP+WKRA+  E+      G +   + P G+  +G R V++ K D+DGRI +YK RL+                                          DV  AYL A+++E IY+  P  Y +    +  L+KA+YGL  AG  W       L A  GFQR   DPCV+ +    G+ +      VDDM   + T    +     L   + + D+G     LG   ++DR   T    Q QYIQTV +RF +   +  +      +     P+ DA++ E + +PY+ ++ +LM+A   TRPDIS+A    ++++  PG THW AA++ L+YL  T+D GI Y G+
Sbjct:   18 LSEAQAAPEWPEWKRAMDDEIAQLRKLGTYAPADLPAGRKPIGCRWVYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQFDVVGAYLNADLDEEIYMRQPPGYEEGSSPIVRLRKALYGLKQAGXQWNHHINKVLTADLGFQRLNSDPCVYLKKSPKGLTIVGMH--VDDMAALADTPDLMDTLRSGLARHYKITDLGTPRLLLGFEISRDRKKRTLSIKQSQYIQTVLDRFKMADCNPVTTPLDPNVKLCKEPE-DADLSEMKGVPYQALIGSLMYAALGTRPDISYAVQALSQYSARPGITHWTAAKRVLRYLKGTQDFGILYSGK 370          
BLAST of mRNA_H-elongata_contig125743.1921.1 vs. uniprot
Match: A0A6G0MA39_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MA39_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.710e-43
Identity = 96/256 (37.50%), Postives = 134/256 (52.34%), Query Frame = 0
Query:   60 KYKCRLLDVDMAYLEAEMEEGIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWQKKFGIELEAKGFQRSQVDPCVF-RVILHGIVVXXXXXXVDDMLVASATKRDEEQAVMDLCSCFPVKDMGEASYYLGCHTTQDRNAGTPKFDQHQYIQTVKERFG---VTKTSIPSAAGRKALSKSDSPQTDAEVEERRQIPYRKIVEALMWAGTMTRPDISFAAHQQAKFNDNPGPTHWKAAQKALQYLWHTRDLGITYGG 311
            +Y+   LD D A+L +E+++ +Y+E+P    ++R     L KA+YGL+ A   W K         GF+    D CV+ +   +G +       VDDM++A  T  D  +    L + F +K++G A   L      D  AGT K  Q +YI  V ERFG         P AAG K LSK+ SP TDAE    R  PYR ++  L++  T TRPDI+F A Q ++F +NPG  HW AA + L+YL   R  GI Y G
Sbjct:   15 EYRMEQLDADTAFLNSELKDRVYMEVPFGIENARDYQYQLNKAIYGLMQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYVCLY--VDDMIIAVKTSEDIREVKDALKNAFKMKELGPAKSILAMEIDHDMTAGTLKIKQTRYIDDVVERFGQENAKPVDDPCAAGLK-LSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFMATQLSRFLENPGQQHWNAAVRVLRYLKAARQHGIIYQG 267          
BLAST of mRNA_H-elongata_contig125743.1921.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 167 bits (422), Expect = 1.350e-42
Identity = 118/360 (32.78%), Postives = 170/360 (47.22%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDNDGRIKKYKCRL------------------------------------------LDVDMAYLEAEMEEGIYVELP--EAYRDSRKQVGLLKKAMYGLVHAGLLWQKKFGIELEAKGFQRSQVDPCVFRVILHG-IVVXXXXXXVDDMLVASATKRDEEQAVM----DLCSCFPVKDMGEASYYLGCHTTQDRNAGTPKFDQHQYIQTVKERFGVTKT---SIPSAAGRKALSKSDSPQTDAEVEERRQIPYRKIVEALMWAGTMTRPDISFAAHQQAKFNDNPGPTHWKAAQKALQYLWHTRDLGITYG 310
            EA  S +WPQW++AI +EM        + +VE P+   V+G++ VF+ K + +G+I+ YK RL                                          +DV  AYL A++EE I+++ P  +A R     V LL+ A+YGL  +G  W KK    L+  G  RS VD CVF +      V       VDD  +A         AV+    ++   F + D+GE  + LG    +DR A T    Q  YI  +  RF +      S P   G   LS    P T  E E+ R +PYR+ + +LM+A   TRPDI+FA    ++F  NPG  HW+AA++ L+YL  TR+  +TYG
Sbjct:  965 EAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNN-----AVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGA-ILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKSTREKWLTYG 1318          
BLAST of mRNA_H-elongata_contig125743.1921.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 6.070e-42
Identity = 113/351 (32.19%), Postives = 171/351 (48.72%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVER-PKGKTVLGTRVVFKRKIDNDGRIKKYKCRLL------------------------------------------DVDMAYLEAEMEEGIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWQKKFGIELEAKGFQRSQVDPCVFRVILHGIVVXXXXXXVDDMLVASATKRDEEQAVMDLCSCFPVKDMGEASYYLGCHTTQDRNAGTPKFDQHQYIQTVKERFGVTKTS-IPSAAGRKALSKSDSPQTDAEVEERRQIPYRKIVEALMWAGTMTRPDISFAAHQQAKFNDNPGPTHWKAAQKALQYLWHTRDLGITY 309
            EAQ S     W+ A++ E++G    G + +  + P G  V+  R VFK K D  G+I K K RL+                                          D++ A++++E++  ++++LP        +V  L K++YGL  A   + K+   EL+  GF++S  DPCV R ++   VV      VDD+L A  TK   E  V  L    P K++GE  ++LGC   +DR AGT +  Q  YI++V ERF V +TS IP+       S ++  ++  E E    +P+R++V +LMW    TRPDIS A    A+ +  P  +HWKAAQK L YL  T  L + +
Sbjct:  720 EAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKF 1062          
BLAST of mRNA_H-elongata_contig125743.1921.1 vs. uniprot
Match: Q572I3_PHYIN (Putative polyprotein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=Q572I3_PHYIN)

HSP 1 Score: 164 bits (416), Expect = 8.360e-42
Identity = 114/352 (32.39%), Postives = 162/352 (46.02%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDNDGRIKKYKCRL------------------------------------------LDVDMAYLEAEMEEGIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWQKKFGIELEAKGFQRSQVDPCVFRVILHGIVVXXXXXXVDDMLVASATKRDEEQAVMDLCSCFPVKDMGEASYYLGCHTTQDRNAGTPKFDQHQYIQTVKERFGVTKTSI---PSAAGRKALSKSDSPQTDAEVEERRQIPYRKIVEALMWAGTMTRPDISFAAHQQAKFNDNPGPTHWKAAQKALQYLWHTRDLGITY 309
            EA AS+E  +W+RA+  E++  +  G W +V R      +G R VF +K D +GR+ +YK RL                                          LD D A+L + +   +Y+++P    ++      L KA+YGL  A   W K         GF+    D CV+        V      VDDM++A+ T+ +  +    L S F +K++GEA + LG     DR  GT    Q +YI  + ERF      +   P AA  K LSK  SP T+ E  E    PYR ++  LM+  T TRPDI++   Q A+F ++PG  HWKAA + LQYL  TR  GI Y
Sbjct:  832 EAIASNEAGEWRRAMQSELNSHSRNGTWTLVPRGTTTRSIGCRWVFTKKRDENGRVIRYKARLVAQGFKQKFGIDFFETYSPVANMNSIRAVLAVCVTCGYIMEQLDADTAFLNSCLVNLVYMDVPLGLENAEGMKCNLLKAIYGLKQAASAWNKTIHRVFLQNGFKCCGADQCVYVKRSKNAFVYVCLY-VDDMIIAAKTRDEIREVKNALKSAFKMKELGEAKFILGMEIDHDRECGTLMIKQTRYIDDIVERFNQRNAKMVEYPCAANLK-LSKMMSPTTEKERAEMWSRPYRSLIGCLMYITTCTRPDIAYVVTQLARFLEDPGTQHWKAAIRVLQYLKSTRHHGIVY 1181          
BLAST of mRNA_H-elongata_contig125743.1921.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 2.110e-41
Identity = 112/351 (31.91%), Postives = 173/351 (49.29%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQV-VERPKGKTVLGTRVVFKRKIDNDGRIKKYKCRLL------------------------------------------DVDMAYLEAEMEEGIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWQKKFGIELEAKGFQRSQVDPCVFRVILHGIVVXXXXXXVDDMLVASATKRDEEQAVMDLCSCFPVKDMGEASYYLGCHTTQDRNAGTPKFDQHQYIQTVKERFGVTKTS-IPSAAGRKALSKSDSPQTDAEVEERRQIPYRKIVEALMWAGTMTRPDISFAAHQQAKFNDNPGPTHWKAAQKALQYLWHTRDLGITY 309
            EAQ S     W+ A + E++G    G + + V+ P G  V+  R VFK K D  G+I K K RL+                                          D++ A++++E++  +++++P       ++V  L K++YGL  A   + K+   EL+  GF++S  DPCV R ++   VV      VDD+L A  TK   E  V  L    P K++GE  ++LGC   +DR AGT +  Q  YI++V ERF + +TS IP++     L+  D  ++  E E    +P+R++V +LMW  + TR DIS A    A+ +  P  +HWKAAQK L YL  T  L + +
Sbjct:  894 EAQRSKYAKIWEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPAS-----LNNDD--RSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKF 1236          
BLAST of mRNA_H-elongata_contig125743.1921.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 3.400e-41
Identity = 112/351 (31.91%), Postives = 170/351 (48.43%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVER-PKGKTVLGTRVVFKRKIDNDGRIKKYKCRLL------------------------------------------DVDMAYLEAEMEEGIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWQKKFGIELEAKGFQRSQVDPCVFRVILHGIVVXXXXXXVDDMLVASATKRDEEQAVMDLCSCFPVKDMGEASYYLGCHTTQDRNAGTPKFDQHQYIQTVKERFGVTKTS-IPSAAGRKALSKSDSPQTDAEVEERRQIPYRKIVEALMWAGTMTRPDISFAAHQQAKFNDNPGPTHWKAAQKALQYLWHTRDLGITY 309
            EAQ S     W+ A++ E++G    G + +  + P    V+  R VFK K D  G+I K K RL+                                          D++ A++++E++  ++++LP        +V  L K++YGL  A   + K+   EL+  GF++S  DPCV R ++   VV      VDD+L A  TK   E  V  L    P K++GE  ++LGC   +DR AGT +  Q  YI++V ERF V +TS IP+       S ++  ++  E E    +P+R++V +LMW    TRPDIS A    A+ +  P  +HWKAAQK L YL  T  L + +
Sbjct:  453 EAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPISCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKF 795          
BLAST of mRNA_H-elongata_contig125743.1921.1 vs. uniprot
Match: A0A6H5JQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD0_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 1.140e-40
Identity = 92/253 (36.36%), Postives = 138/253 (54.55%), Query Frame = 0
Query:   60 KYKCRLL--DVDMAYLEAEMEEGIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWQKKFGIELEAKGFQRSQVDPCVFRVILHGIVVXXXXXXVDDMLVASATKRDEEQAVMDLCSCFPVKDMGEASYYLGCHTTQDRNAGTPKFDQHQYIQTVKERFGVTKTS-IPSAAGRKALSKSDSPQTDAEVEERRQIPYRKIVEALMWAGTMTRPDISFAAHQQAKFNDNPGPTHWKAAQKALQYLWHTRDLGITY 309
            KY   LL  D++ A++++E++  ++++LP        +V  L K++YGL  A   + K+   EL+  GF++S  DPCV R ++   VV      VDD+L A  T    E  V  L    P K +GE  ++LGC   +DR AGT +  Q  YI++V ERF V +TS IP+       S ++  ++  E E    +P+R++V +LMW    TRPDIS A    A+ +  P  +HWKAAQK L YL  T  L + +
Sbjct:   85 KYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTTSL-AEVVVAALGDFLPTKSLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKF 329          
BLAST of mRNA_H-elongata_contig125743.1921.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 2.360e-40
Identity = 111/351 (31.62%), Postives = 172/351 (49.00%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQV-VERPKGKTVLGTRVVFKRKIDNDGRIKKYKCRLL------------------------------------------DVDMAYLEAEMEEGIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWQKKFGIELEAKGFQRSQVDPCVFRVILHGIVVXXXXXXVDDMLVASATKRDEEQAVMDLCSCFPVKDMGEASYYLGCHTTQDRNAGTPKFDQHQYIQTVKERFGVTKTS-IPSAAGRKALSKSDSPQTDAEVEERRQIPYRKIVEALMWAGTMTRPDISFAAHQQAKFNDNPGPTHWKAAQKALQYLWHTRDLGITY 309
            EAQ S     W+ A + E++G    G + + V+ P G  V+  R VFK K D  G+I K K RL+                                          D++ A++++E++  +++++P       ++V  L K++YGL  A   + K+   EL+  GF++S  DPCV   ++   VV      VDD+L A  TK   E  V  L    P K++GE  ++LGC   +DR AGT +  Q  YI++V ERF + +TS IP++     L+  D  ++  E E    +P+R++V +LMW  + TR DIS A    A+ +  P  +HWKAAQK L YL  T  L + +
Sbjct:  684 EAQRSKYAKIWEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLCFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPAS-----LNNDD--RSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKF 1026          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig125743.1921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0N8R7_9STRA2.920e-4634.34Integrase catalytic domain-containing protein n=3 ... [more]
A0A1M2V3W8_TRAPU1.340e-4431.74Retrovirus-related Pol polyprotein from transposon... [more]
A0A6G0MA39_9STRA3.710e-4337.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GQU1_9APHY1.350e-4232.78Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A6H5JRL9_9PHAE6.070e-4232.19Integrase catalytic domain-containing protein n=2 ... [more]
Q572I3_PHYIN8.360e-4232.39Putative polyprotein n=1 Tax=Phytophthora infestan... [more]
A0A6H5KZH7_9PHAE2.110e-4131.91Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKK1_9PHAE3.400e-4131.91Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JQD0_9PHAE1.140e-4036.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L3I1_9PHAE2.360e-4031.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 66..221
e-value: 9.2E-26
score: 91.0
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 3..275
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 153..313
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..133
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 65..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig125743contigH-elongata_contig125743:4..1068 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig125743.1921.1mRNA_H-elongata_contig125743.1921.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig125743 4..1089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig125743.1921.1 ID=prot_H-elongata_contig125743.1921.1|Name=mRNA_H-elongata_contig125743.1921.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=313bp
MGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKR
KIDNDGRIKKYKCRLLDVDMAYLEAEMEEGIYVELPEAYRDSRKQVGLLK
KAMYGLVHAGLLWQKKFGIELEAKGFQRSQVDPCVFRVILHGIVVVIIVV
YVDDMLVASATKRDEEQAVMDLCSCFPVKDMGEASYYLGCHTTQDRNAGT
PKFDQHQYIQTVKERFGVTKTSIPSAAGRKALSKSDSPQTDAEVEERRQI
PYRKIVEALMWAGTMTRPDISFAAHQQAKFNDNPGPTHWKAAQKALQYLW
HTRDLGITYGGEP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2