prot_H-elongata_contig1257.1918.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1257.1918.1
Unique Nameprot_H-elongata_contig1257.1918.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length271
Homology
BLAST of mRNA_H-elongata_contig1257.1918.1 vs. uniprot
Match: D7FJ97_ECTSI (Thylakoid lumenal protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ97_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 2.100e-65
Identity = 159/195 (81.54%), Postives = 170/195 (87.18%), Query Frame = 0
Query:   75 DNPAADITRTLVTLLAGAVVLLSGDGAALADGSTQKFSLPPISTAKDRCVFKSSAMGQANAARDKLYDLRQCNLSGESAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDFTEAYMGEFDQRNLCKNPTLKGTNPTTNADTRESVGC 269
            DN +A +   L T LAGA VL SG  AALADGST KFSLPP+   KDRC+FKSSAMGQANAARDKLYDLR+C++SG+SAAGFDLSGVIASEA+FSKGDFKEVVMSKAYAR   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    TEAYMG+FDQ+NLCKNPTLKGTNP TNADTR S GC
Sbjct:    4 DNNSARVA--LGTFLAGAAVLFSGGEAALADGSTTKFSLPPVGQGKDRCLFKSSAMGQANAARDKLYDLRECDMSGKSAAGFDLSGVIASEANFSKGDFKEVVMSKAYARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTNADTRASAGC 196          
BLAST of mRNA_H-elongata_contig1257.1918.1 vs. uniprot
Match: A0A836CB03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB03_9STRA)

HSP 1 Score: 176 bits (446), Expect = 4.440e-51
Identity = 143/196 (72.96%), Postives = 164/196 (83.67%), Query Frame = 0
Query:   75 DNPAADITRTLVTLLAGAVVLLSGDGAALADGSTQKFSLPPIS-TAKDRCVFKSSAMGQANAARDKLYDLRQCNLSGESAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDFTEAYMGEFDQRNLCKNPTLKGTNPTTNADTRESVGC 269
            +  A+  +RT+  +LAG + LL G   ALADGST KF+LPPI+ + KDRC FKSS+MGQANAAR+KL+DLR C++SG+SAA  DLSGVIASEA+FSK DFKE  +SKAYARNS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DFTEA MG+FD ++LCKNPTLKG NP T A T+ES GC
Sbjct:   37 EGGASPFSRTVAAVLAG-ISLLGGAELALADGSTGKFALPPINYSEKDRCTFKSSSMGQANAAREKLFDLRMCDMSGKSAALSDLSGVIASEANFSKVDFKEAQLSKAYARNSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTEAAMGDFDLKSLCKNPTLKGENPVTGAPTKESAGC 231          
BLAST of mRNA_H-elongata_contig1257.1918.1 vs. uniprot
Match: A0A448ZE67_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZE67_9STRA)

HSP 1 Score: 158 bits (399), Expect = 6.440e-44
Identity = 134/212 (63.21%), Postives = 151/212 (71.23%), Query Frame = 0
Query:   62 RPPSCLLMSTSGPDNPAADITRTLVTLLAGAV---VLLSGDGAALADGSTQKFSLPPIS-TAKDRCVFKSSAMGQANAARDKLYDLRQCNLSGESAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDFTEAYMGEFDQRNLCKNPTLKGTNPTTNADTRESVGC 269
            R P+  L +T   D  + + T      LA      +L +G   A ADG T+KF LPP+  T K RC  KSS++GQANAARDKLYDLRQC LSGESA GFDLSGVI +E D SK +F++ V SK Y R+SN    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    TEA +G FD +NLCKNPTLKG NPTT  DTR SVGC
Sbjct:   26 RTPTLSLQATKNHDRESENATTFANVALASIFSLSLLSAGPLPAFADGQTEKFKLPPVDLTDKTRCTLKSSSIGQANAARDKLYDLRQCKLSGESAVGFDLSGVIMTETDVSKVNFQDAVFSKGYLRDSNFEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAAIGNFDLKNLCKNPTLKGENPTTGEDTRFSVGC 237          
BLAST of mRNA_H-elongata_contig1257.1918.1 vs. uniprot
Match: A0A7S2UM92_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM92_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.190e-40
Identity = 128/196 (65.31%), Postives = 144/196 (73.47%), Query Frame = 0
Query:   75 DNPAADITRTLVTLLAGAVVLLSGDGAALADGSTQKFSLPPISTA-KDRCVFKSSAMGQANAARDKLYDLRQCNLSGESAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDFTEAYMGEFDQRNLCKNPTLKGTNPTTNADTRESVGC 269
            +   A+  R  ++    A+ L +   A+LADG T+ F LPPI    K RCV  SSAMGQANAARDKLYDLRQCNLSG+ A+GFDLSGVI ++ + S    KE   SKAY     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DFT+AY+GE+D RNLCKNPTLKG NP T  DTR S  C
Sbjct:   49 EGDGAETFRQAISGAVVALTLFTSPMASLADGQTKDFKLPPIDVNDKTRCVLNSSAMGQANAARDKLYDLRQCNLSGKDASGFDLSGVIMTDTNLSNAKLKEAQFSKAYLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADFTDAYIGEYDIRNLCKNPTLKGENPVTGVDTRFSANC 244          
BLAST of mRNA_H-elongata_contig1257.1918.1 vs. uniprot
Match: A0A7S4A906_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A906_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.400e-40
Identity = 125/206 (60.68%), Postives = 146/206 (70.87%), Query Frame = 0
Query:   68 LMSTSGPDNPAADITRTLVTLLAGAV---VLLSGDGAALADGSTQKFSLPPISTA-KDRCVFKSSAMGQANAARDKLYDLRQCNLSGESAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDFTEAYMGEFDQRNLCKNPTLKGTNPTTNADTRESVGC 269
            L ST   D  +  +T+     LA      +L +G   A ADG T+KF LPP+  A K+RC   SS +GQANAARDKLYDLRQCNLSG++A GFDLSGVI +  D SK +F++ + SKAY R+SN     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     E+ +G FD +NLCKNP+LKG NP T  DTR SVGC
Sbjct:   32 LQSTKNHDRESDKVTKFANVALASIFSLSLLSAGPLPAFADGQTEKFKLPPVDLADKNRCTLSSSTIGQANAARDKLYDLRQCNLSGKAAVGFDLSGVIMTGTDVSKVNFQDAIFSKAYLRDSNFEGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALGNFDLKNLCKNPSLKGENPVTGEDTRLSVGC 237          
BLAST of mRNA_H-elongata_contig1257.1918.1 vs. uniprot
Match: A0A4D9D0Q4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Q4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 4.000e-40
Identity = 124/190 (65.26%), Postives = 145/190 (76.32%), Query Frame = 0
Query:   81 ITRTLVTLLAGAVVLLSGDGAALADGSTQKFSLPPISTA-KDRCVFKSSAMGQANAARDKLYDLRQCNLSGESAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDFTEAYMGEFDQRNLCKNPTLKGTNPTTNADTRESVGC 269
            +T  ++++L  A V  S   A +ADG+T +F LPP+ T  K RC FKSS MGQANAARDKLYDLR C++SG+ A GFDLSG I +E  F K +FKE V+SKAYA+ ++XXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXX    T+ YMGEF+ R LCKNPTLKGTNP T A T+ES GC
Sbjct:   57 LTVAVLSVLFPAAVTFSPPPA-IADGATSRFVLPPVDTKDKGRCQFKSSNMGQANAARDKLYDLRLCDMSGKDATGFDLSGAIMAEGTFKKVNFKEAVLSKAYAKAADXXXXXXXXXXXXRVSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGC 245          
BLAST of mRNA_H-elongata_contig1257.1918.1 vs. uniprot
Match: A0A7S1H2G8_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H2G8_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.220e-39
Identity = 121/177 (68.36%), Postives = 132/177 (74.58%), Query Frame = 0
Query:   94 VLLSGDGAALADGSTQKFSLPPISTA-KDRCVFKSSAMGQANAARDKLYDLRQCNLSGESAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDFTEAYMGEFDQRNLCKNPTLKGTNPTTNADTRESVGC 269
            V+LS    + ADG T++F LPPI    K RC   SSA+GQANAARDKLYDLR+C LSGE A GFDLSGVI ++ D SK DFKE   SK Y R+SN     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      AY+G+FD RNLCKNPTLKG N  T ADTR S GC
Sbjct:   21 VILSSPMPSYADGQTKEFKLPPIDFKDKSRCTLSSSAIGQANAARDKLYDLRECKLSGEKATGFDLSGVIMTKTDVSKVDFKEAYFSKGYLRDSNFDGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYIGDFDIRNLCKNPTLKGENSVTGADTRLSAGC 197          
BLAST of mRNA_H-elongata_contig1257.1918.1 vs. uniprot
Match: A0A7S3B0S2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B0S2_9EUKA)

HSP 1 Score: 145 bits (366), Expect = 3.910e-39
Identity = 122/169 (72.19%), Postives = 135/169 (79.88%), Query Frame = 0
Query:  102 ALADGSTQKFSLPPI-STAKDRCVFKSSAMGQANAARDKLYDLRQCNLSGESAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDFTEAYMGEFDQRNLCKNPTLKGTNPTTNADTRESVGC 269
            ALADG T KF  PPI +T K+RC F SSAMGQANAARD LYDLRQC+++G  A GFD+SG + +  DFS  +FKE  +SK YA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DFTEAY+G++DQR LCKNP LKG NP T A TRES GC
Sbjct:   60 ALADGDTSKFKFPPIDNTNKNRCQFSSSAMGQANAARDSLYDLRQCSMAGTMAMGFDISGALLAGGDFSGVNFKEAQLSKVYAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTEAYIGDYDQRKLCKNPKLKGENPKTGAPTRESAGC 228          
BLAST of mRNA_H-elongata_contig1257.1918.1 vs. uniprot
Match: A0A1Z5KF76_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KF76_FISSO)

HSP 1 Score: 146 bits (368), Expect = 4.550e-39
Identity = 120/171 (70.18%), Postives = 138/171 (80.70%), Query Frame = 0
Query:  100 GAALADGSTQKFSLPPISTAK-DRCVFKSSAMGQANAARDKLYDLRQCNLSGESAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDFTEAYMGEFDQRNLCKNPTLKGTNPTTNADTRESVGC 269
            GAALADG T KF LPPI  +  +RCV KSS++GQANAARDKLYDLR CN+  + A G+DLSGVI ++ D  K +F++   SKAY  +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DF++AYMG+FD R+LCKNPTL+GTNP T  DTR S GC
Sbjct:   89 GAALADGQTSKFKLPPIDYSDPNRCVLKSSSIGQANAARDKLYDLRACNIPEQKAVGYDLSGVITTKTDLRKSNFQDAQFSKAYLHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDFSDAYMGDFDSRSLCKNPTLQGTNPVTGVDTRASAGC 259          
BLAST of mRNA_H-elongata_contig1257.1918.1 vs. uniprot
Match: A0A7S2H4B8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2H4B8_9EUKA)

HSP 1 Score: 144 bits (363), Expect = 9.540e-39
Identity = 113/169 (66.86%), Postives = 125/169 (73.96%), Query Frame = 0
Query:  102 ALADGSTQKFSLPPISTA-KDRCVFKSSAMGQANAARDKLYDLRQCNLSGESAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDFTEAYMGEFDQRNLCKNPTLKGTNPTTNADTRESVGC 269
            ALADG T++F  PPI    KDRC F SSAMGQANAARD LYDLR+C +S  +AAGFD+SG + +  DFSK DFKE  +SK YA  +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      + DFTEAY+G FD R LCKNPTL G NP T A TR S GC
Sbjct:   54 ALADGDTKEFKFPPIDRKNKDRCKFSSSAMGQANAARDSLYDLRECAMSETNAAGFDISGALMANGDFSKVDFKEAQLSKVYAPGAKFDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEADLKDADFTEAYIGMFDLRKLCKNPTLDGENPITGAPTRASAGC 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1257.1918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ97_ECTSI2.100e-6581.54Thylakoid lumenal protein n=2 Tax=Ectocarpus TaxID... [more]
A0A836CB03_9STRA4.440e-5172.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A448ZE67_9STRA6.440e-4463.21Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2UM92_9STRA2.190e-4065.31Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4A906_9STRA3.400e-4060.68Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A4D9D0Q4_9STRA4.000e-4065.26Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1H2G8_9STRA1.220e-3968.36Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S3B0S2_9EUKA3.910e-3972.19Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A1Z5KF76_FISSO4.550e-3970.18Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2H4B8_9EUKA9.540e-3966.86Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.100coord: 139..270
e-value: 1.2E-25
score: 91.3
NoneNo IPR availablePANTHERPTHR47485:SF1THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTICcoord: 88..254
NoneNo IPR availablePANTHERPTHR47485FAMILY NOT NAMEDcoord: 88..254
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..270
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..39
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..23
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..39
score: 0.615
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 142..244
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 200..234
e-value: 5.7E-7
score: 29.0
coord: 142..179
e-value: 0.0026
score: 17.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1257contigH-elongata_contig1257:7622..10877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1257.1918.1mRNA_H-elongata_contig1257.1918.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1257 7493..12023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1257.1918.1 ID=prot_H-elongata_contig1257.1918.1|Name=mRNA_H-elongata_contig1257.1918.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=271bp
MKSALTATGAMAAILAALSIASCMVSSAAFLAGAGGAFGRNVHSSDCSSL
PSTITMARATLRPPSCLLMSTSGPDNPAADITRTLVTLLAGAVVLLSGDG
AALADGSTQKFSLPPISTAKDRCVFKSSAMGQANAARDKLYDLRQCNLSG
ESAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNWENADFTNAVVDR
VSFDDSSLKGAIFQNAVLTSTSFTGANVENVDFTEAYMGEFDQRNLCKNP
TLKGTNPTTNADTRESVGCP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat