prot_H-elongata_contig125554.1909.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig125554.1909.1
Unique Nameprot_H-elongata_contig125554.1909.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig125554.1909.1 vs. uniprot
Match: D8LIT8_ECTSI (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIT8_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 8.180e-23
Identity = 50/66 (75.76%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    1 NRLTNQTAQALCDAREP-AWNMVVPPARLCTDNGVMVAWAGVERLRKGMSNVAEGQGVYPRLPLGR 65
            N+   +  QALCD REP AW MVVPPARLCTDNGVMVAWA VERLR+GMSN AE Q VY RLPLGR
Sbjct:  650 NQELRRRLQALCDEREPDAWRMVVPPARLCTDNGVMVAWAAVERLREGMSNDAEEQEVYARLPLGR 715          
BLAST of mRNA_H-elongata_contig125554.1909.1 vs. uniprot
Match: A0A835YKI5_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.970e-16
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0
Query:   18 AWNMVVPPARLCTDNGVMVAWAGVERLRKGMSNVAEGQGVYPRLPLG 64
            AW MVVPPARLCTDNGVMVAW+ VERLR G+SN A GQ VY R+PLG
Sbjct:  336 AWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLG 382          
BLAST of mRNA_H-elongata_contig125554.1909.1 vs. uniprot
Match: A0A7S0LCV5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LCV5_9EUKA)

HSP 1 Score: 70.9 bits (172), Expect = 1.650e-13
Identity = 35/68 (51.47%), Postives = 43/68 (63.24%), Query Frame = 0
Query:    9 QALCDAREP-------AWNMVVPPARLCTDNGVMVAWAGVERLRKGMSNVAEGQGVYPRLPLGRATIS 69
            Q LCDA           W++VVPP RLCTDNGVMVAWA  E L+ G  ++A+GQ V  R PLG++  S
Sbjct:  110 QKLCDATAAPGATPGGTWSLVVPPPRLCTDNGVMVAWAAAETLQLGECHIADGQEVRARWPLGKSVAS 177          
BLAST of mRNA_H-elongata_contig125554.1909.1 vs. uniprot
Match: W7TQK2_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQK2_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.150e-12
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:   13 DAREPAWNMVVPPARLCTDNGVMVAWAGVERLRKGMSNVAEGQGVYPRLP 62
            +A  P W +VVPP RLCTDNGVMVAWA +E+LR G S+V EG+ V+ R P
Sbjct:  500 EAPLPPWELVVPPPRLCTDNGVMVAWAAIEKLRLGYSDVVEGRDVHARWP 549          
BLAST of mRNA_H-elongata_contig125554.1909.1 vs. uniprot
Match: K0T4A1_THAOC (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T4A1_THAOC)

HSP 1 Score: 70.5 bits (171), Expect = 1.560e-12
Identity = 33/70 (47.14%), Postives = 40/70 (57.14%), Query Frame = 0
Query:    1 NRLTNQTAQALCDAREPAWNMVVPPARLCTDNGVMVAWAGVERLRKGMSNVAEGQGVYPRLPLGRATISS 70
            N+      + LC  R+  W M VPP RLCTD G M AWA VERL  G S+VAEG  VY R P     +++
Sbjct:  427 NKELRSRLEVLCTDRDHRWEMHVPPPRLCTDQGAMSAWASVERLAVGSSDVAEGHEVYARYPFSSNEVAT 496          
BLAST of mRNA_H-elongata_contig125554.1909.1 vs. uniprot
Match: A0A7S2V5H1_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5H1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 7.450e-12
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    2 RLTNQTAQALCDAREPAWNMVVPPARLCTDNGVMVAWAGVERLRKGMSNVAEGQGVYPRLPLGRA 66
            R  +++A    D    +W + VPP RLCTDNGVMVAWA +ERL+ G+S+      V+PR PLG+A
Sbjct:  439 RKASRSADPPPDFHCESWKLFVPPPRLCTDNGVMVAWAAIERLKLGVSDSPLENDVFPRWPLGKA 503          
BLAST of mRNA_H-elongata_contig125554.1909.1 vs. uniprot
Match: A0A7S2IUQ1_9EUKA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IUQ1_9EUKA)

HSP 1 Score: 68.2 bits (165), Expect = 9.030e-12
Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    9 QALCDAR-------EPAWNMVVPPARLCTDNGVMVAWAGVERLRKGMSNVAEGQGV 57
            QALCD+        EP W +VVPP RLCTDNGVMVAWA VE++R G S+ AEGQ V
Sbjct:  283 QALCDSTAAPGGSGEP-WQLVVPPPRLCTDNGVMVAWAAVEQMRSGQSHEAEGQEV 337          
BLAST of mRNA_H-elongata_contig125554.1909.1 vs. uniprot
Match: R1CZN8_EMIHU (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZN8_EMIHU)

HSP 1 Score: 65.9 bits (159), Expect = 6.550e-11
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   19 WNMVVPPARLCTDNGVMVAWAGVERLRKGMSNVAEGQGVYPRLPLGR 65
            W MVVPP RLCTDNGVMVAWA  ERL+ G+++  + + V  R PLGR
Sbjct:  365 WRMVVPPPRLCTDNGVMVAWAAAERLKLGLTDAPDVEHVRARWPLGR 411          
BLAST of mRNA_H-elongata_contig125554.1909.1 vs. uniprot
Match: A0A448Z7G4_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7G4_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 9.040e-11
Identity = 31/62 (50.00%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    1 NRLTNQTAQALCDAREPAWNMVVPPARLCTDNGVMVAWAGVERLRKGMSNVAEGQGVYPRLP 62
            N+   +  Q+ CD RE  W MVVPP RLCTD G M +WA +ERLR G S+    Q +Y R P
Sbjct:  427 NQELRRRLQSKCDDRE--WTMVVPPPRLCTDQGAMASWAAIERLRLGSSDDPSTQDIYARYP 486          
BLAST of mRNA_H-elongata_contig125554.1909.1 vs. uniprot
Match: A0A7R9UR57_DIALT (N(6)-L-threonylcarbamoyladenine synthase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UR57_DIALT)

HSP 1 Score: 64.3 bits (155), Expect = 1.820e-10
Identity = 36/66 (54.55%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    1 NRLTNQTAQALCDAREPAWNMVVPPARLCTDNGVMVAWAGVERLRKGMSNVAEGQGVYPRLPLGRA 66
            N L      ALC+  E    M  PP RLCTDNGVMVAWA +ERL  G S+ AEG  V  R PLG A
Sbjct:  245 NALVRARLGALCE--EHGLAMHTPPPRLCTDNGVMVAWAAIERLALGHSDQAEGTEVRARWPLGAA 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig125554.1909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIT8_ECTSI8.180e-2375.76Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A835YKI5_9STRA1.970e-1678.72Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S0LCV5_9EUKA1.650e-1351.47Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
W7TQK2_9STRA1.150e-1262.00Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
K0T4A1_THAOC1.560e-1247.14Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S2V5H1_9STRA7.450e-1249.23Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S2IUQ1_9EUKA9.030e-1262.50Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
R1CZN8_EMIHU6.550e-1161.70Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A448Z7G4_9STRA9.040e-1150.00Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7R9UR57_DIALT1.820e-1054.55N(6)-L-threonylcarbamoyladenine synthase n=2 Tax=D... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.40coord: 3..68
e-value: 3.9E-7
score: 31.6
IPR000905Gcp-like domainPANTHERPTHR11735O-SIALOGLYCOPROTEIN ENDOPEPTIDASEcoord: 10..66
IPR022450tRNA N6-adenosine threonylcarbamoyltransferase, TsaDPANTHERPTHR11735:SF6TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATEDcoord: 10..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig125554contigH-elongata_contig125554:1539..1751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig125554.1909.1mRNA_H-elongata_contig125554.1909.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig125554 1539..1751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig125554.1909.1 ID=prot_H-elongata_contig125554.1909.1|Name=mRNA_H-elongata_contig125554.1909.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
NRLTNQTAQALCDAREPAWNMVVPPARLCTDNGVMVAWAGVERLRKGMSN
VAEGQGVYPRLPLGRATISS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000905Gcp-like_dom
IPR022450TsaD