prot_H-elongata_contig12531.1899.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12531.1899.1
Unique Nameprot_H-elongata_contig12531.1899.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length588
Homology
BLAST of mRNA_H-elongata_contig12531.1899.1 vs. uniprot
Match: D8LSF7_ECTSI (C2-C2_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF7_ECTSI)

HSP 1 Score: 530 bits (1366), Expect = 2.420e-169
Identity = 335/638 (52.51%), Postives = 400/638 (62.70%), Query Frame = 0
Query:    1 MDDRANVI------ESGEEVWPSGDD---LIGEALIDLSPLTDGRPVVAEWTILEDATGKAAGQISVSARWVKPLRIGGDSGPHGLSAEEVEGLMARFSPEKDGQVNYVTFLRECDPPPAVLAVLGQIHAFLSEAAEKEGLCATEALSAVLGIAGSDPKTFVPEEAFVSALLASGKLNTSPEELAVAYAHAADRGGSDSKSDTTRGLTLEHLAAFAALPGETSALDTASSCCG----WVXXXXXXXRPGDGGAPARRALVKTRAKCRDAGLLGRSFPGEAFARLDPEGSGRVTRPAFKRALREMGFALVDERMEMDTGSAGVTPFGGGRYQPNQQQKLEGEAGSSR----NLGSMAED------DHAGEDVKEIRLLRGEGEDEEGDARRKAFRERVEEIERSTTEKVIGSSPSNLPGDRG--GAEVEPCIAQLGDNGGES------------GPPQHHPSSVLVVSRQSNVFIPRPAIKLGRENAVILLQSRFRGFRSRKLGATGGGV--LPSAAKESHNLKHRKVE------------NGHCSILELEDCIDAALGKLEGSCPQPDIRAAFAKLDRDSTGFLDHPRFALALRGIRPALELPPSLLQAAMKFFDAHENYLKDDQGRGGEKSRNVDYR 587
            MDD AN        E G + WP  D+   LIGEAL+DLSP+ +GRPVVA WT +EDATG++AG+I VSARWVKPLR GGD GPHGLS+EEVEGLMARFSPEKDGQVNYV FL+E DPPPAVLA L QI  FL++A+E++GL ATEAL AVLG+ GSDPK  + EEAFVSALL+S  L  SP+ELA AYAH            +  GLTLEHLAAFA+  G                 WV       RPGDGGA ARRALVK R KCRDAGLLGRSFPGE FA+LDPEG+GRV RPAFKRALREMGFALVDE  E  + S G+     G  Q  +  K E E G  R     LG+M E+       HA E   EIRL R EGE E  +ARR+AFR +VE IER+T EK+  +   +  G  G  G  VEP IA L DN                 PP  HPSS   V+R S   I      LGR+ A  L+QSRFRG+R+R+    GGG   L +  K                        G CS+L+LED +++  G+LEG+CP PD+RA+FAKLD++STG LD PRFALALR +RP+LEL P LL+AAM++F+     ++  +  GG+ SR +DYR
Sbjct:  918 MDDLANAPGDLDANEGGGDAWPDDDESEGLIGEALVDLSPMAEGRPVVAGWTTVEDATGRSAGKICVSARWVKPLRTGGDPGPHGLSSEEVEGLMARFSPEKDGQVNYVAFLKESDPPPAVLAALSQIQTFLADASERDGLSATEALGAVLGVQGSDPKAQLSEEAFVSALLSSASLTASPDELAAAYAHXXXXXXXXXXXXSHHGLTLEHLAAFASCGGXXXXXXXXXXXXXXXGDWVSWIGAV-RPGDGGAAARRALVKARVKCRDAGLLGRSFPGEVFAKLDPEGAGRVGRPAFKRALREMGFALVDEAPE--SNSEGLL----GGDQQWRALKAEQEGGRGRAAGMGLGNMLEEAASATATHADE---EIRLRRAEGE-ERDEARRQAFRAKVEGIERATAEKIDAAEALSGGGGVGPKGEGVEPRIANL-DNXXXXXXXXXXXXXXGLAPPNQHPSS--TVARDSQARIGPAGGGLGRDAAASLVQSRFRGYRTRRSLVGGGGAEGLTAGGKXXXXXXXXXXXXXXXXXXXXXEGKGKCSVLDLEDYVESIFGRLEGTCPPPDLRASFAKLDKESTGLLDRPRFALALRNLRPSLELSPELLRAAMEYFE-DSTAVRGGRVGGGQTSR-IDYR 1539          
BLAST of mRNA_H-elongata_contig12531.1899.1 vs. uniprot
Match: A0A6H5KSV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV9_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 1.110e-135
Identity = 275/521 (52.78%), Postives = 325/521 (62.38%), Query Frame = 0
Query:    1 MDDRAN------VIESGEEVWPSGDD------------------LIGEALIDLSPLTDGRPVVAEWTILEDATGKAAGQISVSARWVKPLRIGGDSGPHGLSAEEVEGLMARFSPEKDGQ-----VNYVTFLRECDPPPAVLAVLGQIHAFLSEAAEKEGLCATEALSAVLGIAGSDPKTFVPEEAFVSALLASGKLNTSPEELAVAYAHAADRGGSDSKSDTTRGLTLEHLAAFAALPGETSALDTASSCCGWVXXXXXXXRPGDGGAPARRALVKTRAKCRDAGLLGRSFPGEAFARLDPEGSGRVTRPAFKRALREMGFALVDERMEMDTGSAGVTPFGGGRYQPNQQQKLEGEAGSSRN--LGSMAED------DHAGEDVKEIRLLRGEGEDEEGDARRKAFRERVEEIERSTTEKVIGSSPSNLPGDRG----GAEVEPCIAQLGD---------NGGESGPPQHHPSSVLVVSRQSNVFIPRPAIKLGRENAVILLQSRFRGFRSRKLGATGGG 471
            MDD AN        + G + WP  D+                  LIGEALIDLSPL +GRPVVA WT +EDATG++AG++ VSARWVKPLR GGD GPHGLS+EEVEGLMARFSPEKDGQ     VNY+ FL+E DPPPAVLA L Q+  FL++A+E++GL ATEAL AVLG+ GSDPKT + EEAFVSALL+S  L  SP+ELA AYA+ A          +  GLTLEHLAAFA+  G             WV       RPGDGGA ARRALVK R KCRDAGLLGRSFPGE FA+LDPEG+GRV RPAFKR LREMGFALVDE  E  + S G+   GG +     +   EG  G +    LG+M E+       HA E   EIRL R EGE E  +ARR+AFRE+V++IER+T EK+  +    L G  G    G  +EP I  L +         NG    PP  HPSS   V+R S   I      LGR+ A  L+QSRFRG+R+R+ G  GGG
Sbjct:  435 MDDLANGPGDPDANQEGGDAWPDDDESEGNSQRPFFLADSQAQGLIGEALIDLSPLAEGRPVVAGWTTVEDATGRSAGKVCVSARWVKPLRTGGDPGPHGLSSEEVEGLMARFSPEKDGQARASVVNYIAFLKESDPPPAVLAALSQMQTFLADASERDGLSATEALGAVLGVEGSDPKTQLSEEAFVSALLSSASLTASPDELAAAYAYTAGXXXXXXXXXSHHGLTLEHLAAFASCGGXXXXXXXXXXXGDWVSWIGAV-RPGDGGAAARRALVKARVKCRDAGLLGRSFPGEVFAKLDPEGAGRVGRPAFKRGLREMGFALVDEAPE--SNSEGL--LGGDQQWRAIKAGQEGGRGRAAGGGLGNMLEEAASATATHADE---EIRLRRAEGE-ERDEARRQAFREKVQDIERATAEKIDAAEA--LSGGDGVGPKGEGIEPRIVNLDNDNRTLDGSGNGTGLAPPNQHPSS--TVARNSQARIGPAGGGLGRDAAASLVQSRFRGYRTRR-GLVGGG 941          
BLAST of mRNA_H-elongata_contig12531.1899.1 vs. uniprot
Match: A0A836CCF4_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCF4_9STRA)

HSP 1 Score: 112 bits (281), Expect = 4.480e-22
Identity = 72/156 (46.15%), Postives = 96/156 (61.54%), Query Frame = 0
Query:   21 LIGEALIDLSPLTDGRPVVAEWTILEDATGKAAGQISVSARWVKPLRIGG-DSGPHGLSAEEVEGLMARFSPEKDGQVNYVTFLRECDPPPAVLAVLGQIHAFLSEAAEKEGLCATEALSAVLGIAGSDPKTFVPEEAFVSALLASGKLNTSPEEL 175
            LIGEA + L+ L DG  +      L+D  G   G + V+ RW +PLR GG D GP+ L+A EVE LMARFSP KDGQV +V FLR  DPPPAV+A L ++ AFL +  +++G   TE  + +     SD  T   EE F++AL+ +  L+  PEEL
Sbjct: 1054 LIGEAKLSLAALCDGEDITGTLD-LDDEAGCKRGTVRVAVRWRRPLRPGGRDLGPNALTAREVEDLMARFSPHKDGQVRWVAFLRYADPPPAVMAALRRLRAFL-KTQQEDGT--TEPFAFL-----SDGLT---EEQFIAALMGAPNLDEPPEEL 1197          
BLAST of mRNA_H-elongata_contig12531.1899.1 vs. uniprot
Match: A0A7S1TSY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSY9_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.320e-21
Identity = 98/283 (34.63%), Postives = 123/283 (43.46%), Query Frame = 0
Query:   19 DDLIGEALIDLSPLTDGRPVVAEWTILEDATGKAAGQISVSARWVKPLRIGGDSGPHGLSAEEVEGLMARFSPEKDGQVNYVTFLRECDPPPAVLAVLGQIHAFLSEAAEKEGLCATEALSAVLGIAGSDPKTFVPEEAFVSALLASGK-LNTSPEELAVAYAHAADRGGSDSKSDTTRGLTLEHLAAFAALPGETSALDTASSCCGWVXXXXXXXRPGDGGAPA--RRALVKTRAKCRDAGLLGRSFPGEAFARLDPEGSGRVTRPAFKRALREMGFALVDE 298
            D L+GEA + L+PL +G  V  E  + E       G I V   W +PL    +  P+ LS  EVE L+ +FSP KDG+VNY       DPPP +   L  IH FL  A    G  A E       +AGS     +  E FVS LL     L    +EL   Y H  D  G++        +TL+    FA                          RP     PA  +  + K R K  +   LG   P + F R+DP  +GRVTR  FK ALRE GF LVDE
Sbjct:  760 DPLLGEATVPLAPLANGDAVHQELELSE------GGVIQVHIEWARPLLGAAEKRPNALSGVEVEALLEKFSPVKDGRVNYFGLRDFVDPPPTIQRCLDHIHEFLEGARRDHGQDAAEVFEF---LAGSGRAQGLRVEEFVSGLLKPKVGLGLQADELEACY-HFLDPSGAEF-------VTLDAFLEFA--------------------------RP----VPAFLQAVVNKLRRKISERRQLGLE-PFQPFHRMDPTATGRVTRREFKMALREWGFQLVDE 994          
BLAST of mRNA_H-elongata_contig12531.1899.1 vs. uniprot
Match: A0A7S3ZSY2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY2_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 6.930e-16
Identity = 87/292 (29.79%), Postives = 124/292 (42.47%), Query Frame = 0
Query:    9 ESGEEVWPSGDDLIGEALIDLSPLTDGRPVVAEWTILEDATGKAAGQISVSARWVKPLRIGGDSGPHGLSAEEVEGLMARFSPEKDGQVNYVTFLRECDPPPAVLAVLGQIHAFLSEAAEKEGLCATEALSAVLGIAGSDPKTFVPEEAFVSALLASGKLNTSPEELAVAYAHAADRGGSDSKSDTTRGLTLEHLAAFA--ALPGETSALDTASSCCGWVXXXXXXXRPGDGGAPARRALVKTRAKCRDAGLLGRSFPGEAFARLDPEGSGRVTRPAFKRALREMGFALVDE 298
            E    +  + D LIG   + LS L+DG  V +  T+L D TG+  G + V  RW    +         L  +EV   + RFSP KDGQV+Y++FL   D PP V A   ++  F+ +   + G    + L ++      D +  + E+ F  +L A G   +S +EL     HA        K+ + R   LE L      A P E S                                +K +A+      LGR   G  F  LDP  SGR+ RP F++ LR +GF LVDE
Sbjct:  818 EENASIGDADDALIGTCEVPLSLLSDGESVFSTATLLND-TGREVGTLRVCVRWKHAFKQARTPDGSALDEKEVNWCLERFSPRKDGQVDYLSFLHAVDAPPRVDAARQELVQFVEKRRLETGASGRDILESI------DVEA-LSEDEFADSLKAMG-CQSSADELCAFLRHAR-------KAHSGR-FGLEELLQECRRAPPAEASV------------------------------RIKMKAQAERLRRLGRELAGP-FEDLDPARSGRLPRPHFRQGLRGLGFDLVDE 1061          
BLAST of mRNA_H-elongata_contig12531.1899.1 vs. uniprot
Match: A0A7S3ZSY1_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY1_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 6.930e-16
Identity = 87/292 (29.79%), Postives = 124/292 (42.47%), Query Frame = 0
Query:    9 ESGEEVWPSGDDLIGEALIDLSPLTDGRPVVAEWTILEDATGKAAGQISVSARWVKPLRIGGDSGPHGLSAEEVEGLMARFSPEKDGQVNYVTFLRECDPPPAVLAVLGQIHAFLSEAAEKEGLCATEALSAVLGIAGSDPKTFVPEEAFVSALLASGKLNTSPEELAVAYAHAADRGGSDSKSDTTRGLTLEHLAAFA--ALPGETSALDTASSCCGWVXXXXXXXRPGDGGAPARRALVKTRAKCRDAGLLGRSFPGEAFARLDPEGSGRVTRPAFKRALREMGFALVDE 298
            E    +  + D LIG   + LS L+DG  V +  T+L D TG+  G + V  RW    +         L  +EV   + RFSP KDGQV+Y++FL   D PP V A   ++  F+ +   + G    + L ++      D +  + E+ F  +L A G   +S +EL     HA        K+ + R   LE L      A P E S                                +K +A+      LGR   G  F  LDP  SGR+ RP F++ LR +GF LVDE
Sbjct:  818 EENASIGDADDALIGTCEVPLSLLSDGESVFSTATLLND-TGREVGTLRVCVRWKHAFKQARTPDGSALDEKEVNWCLERFSPRKDGQVDYLSFLHAVDAPPRVDAARQELVQFVEKRRLETGASGRDILESI------DVEA-LSEDEFADSLKAMG-CQSSADELCAFLRHAR-------KAHSGR-FGLEELLQECRRAPPAEASV------------------------------RIKMKAQAERLRRLGRELAGP-FEDLDPARSGRLPRPHFRQGLRGLGFDLVDE 1061          
BLAST of mRNA_H-elongata_contig12531.1899.1 vs. uniprot
Match: A0A7S2W0G9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0G9_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.910e-6
Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 0
Query:   49 TGKAAGQISVSARWVKPLRIGGDSGPHGLSAEEVEGLMARFSPEKDGQVNYVTFLRECDPPPAVLAVLGQIHAFL 123
            T +  G + V  RW  P R   ++GP+ L+  +V  L+ RFSPEKDGQV +  FL    PP      L ++  F+
Sbjct:    2 TDRTVGSLRVVVRWKHPFRTEHEAGPNALTGVDVTELLHRFSPEKDGQVEWRRFLAWGFPPHKAAHTLSELREFV 76          
BLAST of mRNA_H-elongata_contig12531.1899.1 vs. uniprot
Match: A0A7S3K2H8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2H8_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 6.350e-5
Identity = 31/93 (33.33%), Postives = 52/93 (55.91%), Query Frame = 0
Query:   32 LTDGRPVVAEWTILEDATGKAAGQISVSARWVKPLRIGGDSGPHG-LSAEEVEGLMARFSPEKDGQVNYVTFLRECDPPPAVLAVLGQIHAFL 123
            L DG+ +    ++  D  G  AG + V  RW    +    S     L+ +E+  ++++FSP KDGQV+YV+FL E D P +V A   +++A++
Sbjct:    2 LADGQSIFTTVSLTNDI-GAQAGALRVGIRWKYEFKDPNASIDLATLNGDELRWILSKFSPLKDGQVDYVSFLYEIDAPKSVEACRSKLYAWI 93          
BLAST of mRNA_H-elongata_contig12531.1899.1 vs. uniprot
Match: A0A662WLW3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLW3_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 6.580e-5
Identity = 49/164 (29.88%), Postives = 74/164 (45.12%), Query Frame = 0
Query:    1 MDDRANVIESGEEVWPSGDDLIGEALIDLSPLTDGRPVVAEWTILEDATGKAAGQISVSARWVKPLRI----------GGDSGP---HGLSAEEVEGLMARFSPEKDGQVNYVTFLRECDPPPAVLAVLGQIHAFLSEAAEKEGL-CATEALSAVLGIAGSDPK 150
             DD+A  +E   +    G  +IG   + LS L +G   V  W  L+D  G+ AG IS+  +W  P ++          G +  P   H L  ++   L+A FSPE DG+VNY  FL    P   +  +  +I      A + E + C  +AL       G+DP+
Sbjct:  385 FDDQAE-LEDNADADAGG--MIGRCGLMLSDLVNGE-CVRGWFPLKDQNGRHAGDISILIQWKDPFQVLQLSSSQRARGVNGRPIDLHSLDFDQQHALLAMFSPEMDGRVNYRQFLHYAVPSEELELIAAKIKERFEYAIDSEQIACIQDAL-----YEGADPR 539          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12531.1899.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LSF7_ECTSI2.420e-16952.51C2-C2_1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KSV9_9PHAE1.110e-13552.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCF4_9STRA4.480e-2246.15EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S1TSY9_9STRA1.320e-2134.63Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3ZSY2_9STRA6.930e-1629.79Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3ZSY1_9STRA6.930e-1629.79Hypothetical protein (Fragment) n=3 Tax=Pelagomona... [more]
A0A7S2W0G9_9STRA4.910e-637.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K2H8_9STRA6.350e-533.33Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A662WLW3_9STRA6.580e-529.88Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 517..545
e-value: 2.4
score: 14.7
coord: 263..291
e-value: 4.4
score: 12.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 513..548
score: 7.958
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 266..294
score: 8.906
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 73..300

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12531contigH-elongata_contig12531:343..3536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12531.1899.1mRNA_H-elongata_contig12531.1899.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12531 319..3536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12531.1899.1 ID=prot_H-elongata_contig12531.1899.1|Name=mRNA_H-elongata_contig12531.1899.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=588bp
MDDRANVIESGEEVWPSGDDLIGEALIDLSPLTDGRPVVAEWTILEDATG
KAAGQISVSARWVKPLRIGGDSGPHGLSAEEVEGLMARFSPEKDGQVNYV
TFLRECDPPPAVLAVLGQIHAFLSEAAEKEGLCATEALSAVLGIAGSDPK
TFVPEEAFVSALLASGKLNTSPEELAVAYAHAADRGGSDSKSDTTRGLTL
EHLAAFAALPGETSALDTASSCCGWVGWVGAIGRPGDGGAPARRALVKTR
AKCRDAGLLGRSFPGEAFARLDPEGSGRVTRPAFKRALREMGFALVDERM
EMDTGSAGVTPFGGGRYQPNQQQKLEGEAGSSRNLGSMAEDDHAGEDVKE
IRLLRGEGEDEEGDARRKAFRERVEEIERSTTEKVIGSSPSNLPGDRGGA
EVEPCIAQLGDNGGESGPPQHHPSSVLVVSRQSNVFIPRPAIKLGRENAV
ILLQSRFRGFRSRKLGATGGGVLPSAAKESHNLKHRKVENGHCSILELED
CIDAALGKLEGSCPQPDIRAAFAKLDRDSTGFLDHPRFALALRGIRPALE
LPPSLLQAAMKFFDAHENYLKDDQGRGGEKSRNVDYRQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair