prot_H-elongata_contig12524.1896.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12524.1896.1
Unique Nameprot_H-elongata_contig12524.1896.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length618
Homology
BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: D7FVQ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVQ1_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 2.520e-141
Identity = 265/551 (48.09%), Postives = 346/551 (62.79%), Query Frame = 0
Query:    1 MEVIRSGGRQVQRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWRRSVLDPSVRQSFVPFYLQREVKHRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETKYDRVVGGLVHRGAFQQTLESALYGMINDGHAILRTAESMVKELLAGMELGPKE-----------------NNDDVSGADSVSGRMS----SKPGIRSRSEHDGKEDYQNVPAVQQ-----PDER----WAAPRPSD--STLIYPK---------------TVNSLGEGESVRSVEVAPLQDGSCLHSQD----------NLLGTCLSRVQDTHRKACRRYSSLVAEIKARNATLTAKLSEATRVGDNSMLRAAEWETQHRALEERLATVEKALRADVDDSTERAERESARARNASDALKSILERATPMLLSMVSTIVPRDTEELGAELFRALDIKPEVYAHIIATKRMFQ----------ADLESRAFEILAAERERTTAE 484
            M  IR GGR V ++F+DVL+  WEGLL+EYLR+VGCPLR  E DPR FV++YWRRS+LDPSVR  FVPFY +REVK R+S++ E++DIR+IRAGL  RE +VK+ E + REQHDYRFVL+YF ASR+LHRTLVANVNYLANEVEQLRAN+DHS ESI++ME Q VELETKYD+VVGGLVHRGAFQ TLE  LYGMI +GH  L++A  M +E+L GM+ GP+                  N D  S   +  G  S    S  G+ + ++ +G++  +   A        P+E     WAAPRP    ST I  +               T   LGEGE     +    +  +  H  D          N+LG CL +  +THR+AC RYS+ VA+++ +NA LTA+ + A ++ + +   A   E +H ALE+RLA VE+  R D+  + ERA++   R     +     LERATP LL M++   PR+TEELGA L  +LDI+P++YAHI+ATKRMF+          AD+ESRAFE+L AER+   AE
Sbjct:   83 MNYIREGGRHVGKRFADVLKFCWEGLLFEYLRTVGCPLRDREHDPRHFVMRYWRRSMLDPSVRPGFVPFYAKREVKKRNSLMQEERDIRNIRAGLALREDVVKDAENKTREQHDYRFVLQYFSASRDLHRTLVANVNYLANEVEQLRANMDHSSESISIMEQQFVELETKYDQVVGGLVHRGAFQLTLEGTLYGMIKEGHVALKSAAVMAREVLDGMDTGPERFDGVDPEVVNGCSANESNGDGYSPCPTQRGFGSAAGGSDLGLAAANQTEGRKRLEESKAGASGAEVDPEENGKQTWAAPRPQGGGSTRIDSRRTGGNNSQERRQTVLTEMKLGEGEEEGVSQTRTDKGATWGHGHDDGSGRRRNLLNVLGPCLGKTLETHRRACTRYSNQVADLEGQNAALTARAAAACKLAEEATTEAKLLEAKHCALEQRLAEVEERSRQDLACAEERADKACLRTLEVVELQTEKLERATPTLLDMLTRFAPRETEELGAYLLHSLDIEPDLYAHIVATKRMFELQEVLAFTTKADMESRAFEMLEAERKIALAE 633          
BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: A0A836CGG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGG2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 7.060e-30
Identity = 70/131 (53.44%), Postives = 89/131 (67.94%), Query Frame = 0
Query:    1 MEVIRSGGRQVQRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWRRSVLDPSVRQSFVPFYLQREVKHRSSIIPE-DKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHR 130
            M  IR G  Q +++F++VLR  WEGLL+EYLRSVGCP+  +E DPR +VLKYWRRS  DP    SFVP+YL+R V  R+   PE D D+ ++RA +M  E  VKE E  VR   DYR +L YF A+ +LHR
Sbjct:   86 MHYIREGRHQAEQRFAEVLRFVWEGLLFEYLRSVGCPVFTAERDPRIYVLKYWRRSTTDPRGAASFVPYYLERRVYARADGQPEEDPDVGEVRARIMGAEVAVKEAEALVRASRDYRHILTYFSATADLHR 216          
BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: A0A7S1XJ94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ94_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.850e-23
Identity = 66/168 (39.29%), Postives = 101/168 (60.12%), Query Frame = 0
Query:    5 RSGGRQVQRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWRRSVLDPSVRQSFVPFYLQREVK--HRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETK 170
            +  G  V+R + +VL++ WEG+L+EYLRSVG PL  + LDPR FV +YW++   DP  R  FVP+Y  REV+  H +    +D D+  +   + T+E  VK+ E  +R++ DYR +L +  A +EL     ++ +YL  +VE+LR+   H   S  +ME Q  ELE +
Sbjct:   99 KENGTHVERNYHEVLKVVWEGVLFEYLRSVGQPLHSNHLDPRTFVARYWKKRATDPKNRL-FVPYYTGREVRNCHENGDYKDD-DLEMVLDDVETKEITVKKMETIMRKERDYRHILNFLNAVKELRDAEKSHRDYLILQVEKLRSVHGHWISSQKIMEEQTEELEQR 264          
BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: F0YAF5_AURAN (WW domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAF5_AURAN)

HSP 1 Score: 110 bits (274), Expect = 3.690e-21
Identity = 60/169 (35.50%), Postives = 92/169 (54.44%), Query Frame = 0
Query:   12 QRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWR-RSVLDPSVRQSFVPFYLQREVKHRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETKYDRVVGGLV 179
            ++   D L + W+G+L+EYLR+ G PLR + +DPR F L+ WR R+  +      F P Y+ R ++ R    P   D+  I  G+  +E  VK  E ++R++ DYR V+R+   +  LH       +YL +E+E  R  +DH   S+ M   QL ELE K++R    LV
Sbjct:  100 EKAHMDCLAMMWDGILFEYLRAEGMPLRSARIDPRVFTLQLWRKRAAFNSGGNVVFRPHYVPRHIRRRGKGAPRAADLEGILRGVEAKELAVKHVENKIRKESDYRNVIRFLADTTSLHEFERDARDYLMHELEAARDRIDHYNMSLEMTAEQLGELELKHERCAEVLV 268          
BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: A0A8J2WS82_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WS82_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.490e-19
Identity = 63/181 (34.81%), Postives = 95/181 (52.49%), Query Frame = 0
Query:    2 EVIRSGGR--QVQRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWRRSVLDPSVRQS-FVPFYLQREVKHRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETKYDRVVGGLV 179
            +V ++G R    +R   + L   W+G+LYEYLR+ G PLR + +DPR F L+ WRR        Q  F P Y+ R V+ R    P   D+  +  G+  +E  +K  E++VR++ DYR V+R+   +  LH       +YL +E+E  R  +DH   S+ M   QL E E  ++R    LV
Sbjct:  169 KVAQTGARYNSTERAHMECLETMWDGILYEYLRAEGQPLRSARVDPRVFTLQMWRRRAAFSQGGQGIFRPHYVPRMVRMRDQKPPRAADLEGLLRGVEAKELALKHIERKVRKESDYRNVIRFLADTTSLHEFERDARDYLMHELESCRDRIDHYQASLEMTGEQLGEAELVHERATTTLV 349          
BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: A0A812VQK1_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VQK1_SYMMI)

HSP 1 Score: 85.5 bits (210), Expect = 7.710e-14
Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = 0
Query:   14 KFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWRRSVLDPSVRQSFVPFYLQREV--KHRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETKY 171
            K    +   WEG L+EYL+S+G        DP+  V+K WRR     S + +F P Y+QR V  +H S +    +DI    A L T E  +K  E+++ E+HDY   L +F    ++ R      +YL N++E  RA L     +  M    L E ET+Y
Sbjct:   88 KVMKAVNNMWEGALFEYLKSIGQGFNTCLPDPKQAVMKIWRRGGFHESNKDTFTPHYIQRRVLTRHDSEL---SEDIASRAATLKTIENSLKHVERELFEEHDYTNALMFFQKIGDVRRLETEFRDYLINKLELARAELSREKSNQEMAASMLAESETRY 244          
BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: A0A7S4DIU4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIU4_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 4.400e-13
Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = 0
Query:   71 LQREVKHRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETKYDRVVGGLVHRGAFQQTLESALYGMI 196
            L R+ + RS     D+DI  I   +  +E  VK+ EQ +R ++DYRFVLRYF A  ELH      ++++  E E LRA ++H  ++ ++   QL ELE +++ +    V RGAF+  L   L G +
Sbjct:    1 LPRKFEVRSGRPRHDRDIGKIVEEIAGKEIAVKQAEQCLRRENDYRFVLRYFTAVNELHDAQKRGMDFMTAEAEMLRARMEHCEQNFSVTAEQLEELEYRHEVLKDRFVARGAFEGALADTLVGTL 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FVQ1_ECTSI2.520e-14148.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGG2_9STRA7.060e-3053.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XJ94_9STRA1.850e-2339.29Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
F0YAF5_AURAN3.690e-2135.50WW domain-containing protein n=1 Tax=Aureococcus a... [more]
A0A8J2WS82_9STRA2.490e-1934.81Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A812VQK1_SYMMI7.710e-1433.75Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S4DIU4_HETAK4.400e-1336.51Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 365..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12524contigH-elongata_contig12524:108..3060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12524.1896.1mRNA_H-elongata_contig12524.1896.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12524 102..3060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12524.1896.1 ID=prot_H-elongata_contig12524.1896.1|Name=mRNA_H-elongata_contig12524.1896.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=618bp
MEVIRSGGRQVQRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVL
KYWRRSVLDPSVRQSFVPFYLQREVKHRSSIIPEDKDIRDIRAGLMTRER
MVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANL
DHSGESITMMEHQLVELETKYDRVVGGLVHRGAFQQTLESALYGMINDGH
AILRTAESMVKELLAGMELGPKENNDDVSGADSVSGRMSSKPGIRSRSEH
DGKEDYQNVPAVQQPDERWAAPRPSDSTLIYPKTVNSLGEGESVRSVEVA
PLQDGSCLHSQDNLLGTCLSRVQDTHRKACRRYSSLVAEIKARNATLTAK
LSEATRVGDNSMLRAAEWETQHRALEERLATVEKALRADVDDSTERAERE
SARARNASDALKSILERATPMLLSMVSTIVPRDTEELGAELFRALDIKPE
VYAHIIATKRMFQADLESRAFEILAAERERTTAEMESVGQEHEQAVGTKK
RGRGRPKSRGKAVRQVTKKGKEASKSRSKSNPAEDAKAATNTEMDGKAGG
GGQNKSEGNGESISRQGETEYSPARGEGKRSRRTAGKGASNPGRAKAQRV
PSPAGKRNAKENKKSKS*
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