prot_H-elongata_contig12510.1888.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12510.1888.1
Unique Nameprot_H-elongata_contig12510.1888.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
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BLAST of mRNA_H-elongata_contig12510.1888.1 vs. uniprot
Match: D7G0I4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I4_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 5.360e-16
Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 0 
Query:    1 QAGYEELINLHGIGFHRAQRILETSHVFCGRSVTPFKGLADLSRIGMFPKEIEKMGKNNMFECLDV 66
            QA   EL +LHGIG  RAQ IL+T      R+  PF+ LADLSRIGM+PK+IEKMG++NM ECLDV
Sbjct:  289 QASSAELTDLHGIGPRRAQLILQT------RAAAPFETLADLSRIGMYPKQIEKMGRHNMLECLDV 348
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BLAST of mRNA_H-elongata_contig12510.1888.1 vs. uniprot
Match: A0A6H5JWP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP7_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 6.990e-16
Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 0 
Query:    1 QAGYEELINLHGIGFHRAQRILETSHVFCGRSVTPFKGLADLSRIGMFPKEIEKMGKNNMFECLDV 66
            QA   EL +LHGIG  RAQ IL+T      R+  PF+ LADLSRIGM+PK+IEKMG++NM ECLDV
Sbjct:  356 QASSAELTDLHGIGPRRAQLILQT------RAAAPFETLADLSRIGMYPKQIEKMGRHNMLECLDV 415
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12510.1888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0I4_ECTSI5.360e-1662.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWP7_9PHAE6.990e-1662.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.320coord: 1..58
e-value: 1.8E-5
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12510contigH-elongata_contig12510:2066..2686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12510.1888.1mRNA_H-elongata_contig12510.1888.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12510 2066..3367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12510.1888.1 ID=prot_H-elongata_contig12510.1888.1|Name=mRNA_H-elongata_contig12510.1888.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
QAGYEELINLHGIGFHRAQRILETSHVFCGRSVTPFKGLADLSRIGMFPK
EIEKMGKNNMFECLDVGHVRPDLAP*
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