prot_H-elongata_contig124907.1878.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig124907.1878.1
Unique Nameprot_H-elongata_contig124907.1878.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length174
Homology
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BLAST of mRNA_H-elongata_contig124907.1878.1 vs. uniprot
Match: UPI001CFA1B10 (uncharacterized protein LOC123037940 n=1 Tax=Drosophila rhopaloa TaxID=1041015 RepID=UPI001CFA1B10)

HSP 1 Score: 278 bits (710), Expect = 5.060e-90
Identity = 149/177 (84.18%), Postives = 160/177 (90.40%), Query Frame = 0 
Query:    1 GVHNVHGGHRLPASVLGVRDRVSDHVFEEHLQHAA----DTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 173
            GVH++HG   LP  V GV D ++D+V +EHLQ+A       MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  244 GVHDIHGCDSLPLGVFGVGDGITDNVLQEHLQNATCFLKSKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 420
[Close]
BLAST of mRNA_H-elongata_contig124907.1878.1 vs. uniprot
Match: UPI00141B6878 (uncharacterized protein LOC117074138 n=1 Tax=Trachypithecus francoisi TaxID=54180 RepID=UPI00141B6878)

HSP 1 Score: 277 bits (709), Expect = 1.570e-89
Identity = 150/175 (85.71%), Postives = 159/175 (90.86%), Query Frame = 0 
Query:    2 VHNVHGGHRLPASVLGVRDRVSDHVFEEHLQHAAD---TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 173
            VH++HG   L   VLGV D V +HV +EHLQH A    +MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  273 VHHIHGCDGLALGVLGVGDCVPNHVLQEHLQHTAGLLYSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 447
[Close]
BLAST of mRNA_H-elongata_contig124907.1878.1 vs. uniprot
Match: UPI000EAB012D (uncharacterized protein LOC101981304 n=2 Tax=Muroidea TaxID=337687 RepID=UPI000EAB012D)

HSP 1 Score: 271 bits (693), Expect = 2.210e-88
Identity = 153/195 (78.46%), Postives = 160/195 (82.05%), Query Frame = 0 
Query:    2 VHNVHGGHRLPASVLGVRDRVSDHVFEEHLQHAA-----------DT------------MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 173
            V ++HGG  L  SVL V D V DHV +EHLQH A           DT            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  155 VDHIHGGDGLTLSVLSVGDGVPDHVLQEHLQHTAGLLVNEAGDSLDTTASGQAADGGLDMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 349
[Close]
BLAST of mRNA_H-elongata_contig124907.1878.1 vs. uniprot
Match: A0A6V1P6C6_HETAK (Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6C6_HETAK)

HSP 1 Score: 252 bits (643), Expect = 9.750e-84
Identity = 135/138 (97.83%), Postives = 138/138 (100.00%), Query Frame = 0 
Query:   36 DTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 173
            +TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLR+QGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    5 ETMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRYQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 142
[Close]
BLAST of mRNA_H-elongata_contig124907.1878.1 vs. uniprot
Match: A0A1L8DWN3_9DIPT (Putative histones h3 and h4 (Fragment) n=1 Tax=Nyssomyia neivai TaxID=330878 RepID=A0A1L8DWN3_9DIPT)

HSP 1 Score: 252 bits (644), Expect = 1.140e-83
Identity = 136/151 (90.07%), Postives = 142/151 (94.04%), Query Frame = 0 
Query:   23 SDHVFEEHLQHAADTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 173
            S+  F   LQ +  TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    7 SETCFAGQLQKSRKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 157
[Close]
BLAST of mRNA_H-elongata_contig124907.1878.1 vs. uniprot
Match: UPI00138FD87A (histone H3 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FD87A)

HSP 1 Score: 252 bits (644), Expect = 1.390e-83
Identity = 137/163 (84.05%), Postives = 150/163 (92.02%), Query Frame = 0 
Query:   15 VLGVRDRVSDHVFEEHLQHAADT----MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 173
            +L V   +S+ +F+E+L++   +    MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    1 MLCVSYSISNDIFKENLEYTTGSTPQKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 163
[Close]
BLAST of mRNA_H-elongata_contig124907.1878.1 vs. uniprot
Match: W4GZ05_9STRA (Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ05_9STRA)

HSP 1 Score: 250 bits (639), Expect = 3.240e-83
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:   38 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 173
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of mRNA_H-elongata_contig124907.1878.1 vs. uniprot
Match: A0A4W2FP88_BOBOX (Histone domain-containing protein n=1 Tax=Bos indicus x Bos taurus TaxID=30522 RepID=A0A4W2FP88_BOBOX)

HSP 1 Score: 251 bits (642), Expect = 5.710e-83
Identity = 136/152 (89.47%), Postives = 142/152 (93.42%), Query Frame = 0 
Query:   22 VSDHVFEEHLQHAADTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 173
            +S+ + E      ADTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:   33 LSEKLAEAAFFKPADTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 184
[Close]
BLAST of mRNA_H-elongata_contig124907.1878.1 vs. uniprot
Match: A0A164UB18_9CRUS (Histone H3.2 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164UB18_9CRUS)

HSP 1 Score: 250 bits (639), Expect = 5.940e-83
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0 
Query:   27 FEEHLQHAADTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 173
            F+    H   TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    8 FQFITNHLTKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 154
[Close]
BLAST of mRNA_H-elongata_contig124907.1878.1 vs. uniprot
Match: A0A0C9RWZ2_9HYME (Histone H3 (Fragment) n=3 Tax=Endopterygota TaxID=33392 RepID=A0A0C9RWZ2_9HYME)

HSP 1 Score: 249 bits (637), Expect = 8.850e-83
Identity = 134/145 (92.41%), Postives = 139/145 (95.86%), Query Frame = 0 
Query:   29 EHLQHAADTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 173
            E L+   D MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    1 EPLKQIFDAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 145
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124907.1878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001CFA1B105.060e-9084.18uncharacterized protein LOC123037940 n=1 Tax=Droso... [more]
UPI00141B68781.570e-8985.71uncharacterized protein LOC117074138 n=1 Tax=Trach... [more]
UPI000EAB012D2.210e-8878.46uncharacterized protein LOC101981304 n=2 Tax=Muroi... [more]
A0A6V1P6C6_HETAK9.750e-8497.83Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A1L8DWN3_9DIPT1.140e-8390.07Putative histones h3 and h4 (Fragment) n=1 Tax=Nys... [more]
UPI00138FD87A1.390e-8384.05histone H3 n=1 Tax=Nematostella vectensis TaxID=45... [more]
W4GZ05_9STRA3.240e-8399.26Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ... [more]
A0A4W2FP88_BOBOX5.710e-8389.47Histone domain-containing protein n=1 Tax=Bos indi... [more]
A0A164UB18_9CRUS5.940e-8391.16Histone H3.2 n=1 Tax=Daphnia magna TaxID=35525 Rep... [more]
A0A0C9RWZ2_9HYME8.850e-8392.41Histone H3 (Fragment) n=3 Tax=Endopterygota TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 71..92
score: 93.58
coord: 117..135
score: 76.89
coord: 135..151
score: 96.93
coord: 95..112
score: 97.46
coord: 151..172
score: 94.86
coord: 40..54
score: 97.1
coord: 54..68
score: 92.32
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 71..173
e-value: 3.3E-73
score: 259.2
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 23..172
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 104..112
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 52..58
IPR009072Histone-foldGENE3D1.10.20.10coord: 39..173
e-value: 8.9E-79
score: 264.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 39..170
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 38..169
e-value: 3.1E-53
score: 179.6
NoneNo IPR availablePANTHERPTHR11426:SF224coord: 23..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig124907contigH-elongata_contig124907:754..1787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig124907.1878.1mRNA_H-elongata_contig124907.1878.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig124907 754..1787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig124907.1878.1 ID=prot_H-elongata_contig124907.1878.1|Name=mRNA_H-elongata_contig124907.1878.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp
GVHNVHGGHRLPASVLGVRDRVSDHVFEEHLQHAADTMARTKQTARKSTG
GKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLI
RKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAI
HAKRVTIMPKDIQLARRIRGERS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3