prot_H-elongata_contig124894.1876.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig124894.1876.1
Unique Nameprot_H-elongata_contig124894.1876.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
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BLAST of mRNA_H-elongata_contig124894.1876.1 vs. uniprot
Match: D8LJY4_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJY4_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 9.100e-12
Identity = 29/44 (65.91%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:    1 SGLADRHLVVVVGEKELCRGGDPAPTPEMEGFAWAYDLSSTEAS 44
            +GLADRHLVV VGE+E+CRGG PAP P  EG +WAYDL S++++
Sbjct:  414 AGLADRHLVVFVGEQEVCRGGVPAPAPPTEGSSWAYDLWSSDSA 457
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124894.1876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJY4_ECTSI9.100e-1265.91C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig124894contigH-elongata_contig124894:1238..1833 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig124894.1876.1mRNA_H-elongata_contig124894.1876.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig124894 1236..1833 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig124894.1876.1 ID=prot_H-elongata_contig124894.1876.1|Name=mRNA_H-elongata_contig124894.1876.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
SGLADRHLVVVVGEKELCRGGDPAPTPEMEGFAWAYDLSSTEASDIAQGA
TGGVAATAATAAAGDADDASREEGEGYTEGVSEERAAVEVST
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