prot_H-elongata_contig12485.1871.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12485.1871.1
Unique Nameprot_H-elongata_contig12485.1871.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length387
Homology
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: D7FJL1_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJL1_ECTSI)

HSP 1 Score: 664 bits (1714), Expect = 2.240e-235
Identity = 333/376 (88.56%), Postives = 354/376 (94.15%), Query Frame = 0
Query:   13 EQLAKPGFFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 387
            +QL K GFFS+ +F  LPL+   L+AL  L+F + TK+QA  IPPLLAGED+VGAAKTGSGKTLAF++PVLE LHKVKWS+RNGT CIIISPTRELSLQTYGVLRD +E G +KQTHGLLIGGANRRAEAERLVKGVN+LVVTPGRLLDHLQNTKGFLFRNMQ+LVIDEADRILEQGFEEEMH IIKLLPKERQTMLFSATQTKKVEDLARLSI+NKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKN KKKIMVFFSSCNSVKFHSELLNYID+PVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIP VDWIIQ+DPPDQTAEYIHRVGRTARGQSG+GRALLFLLPEEVGFLR+L
Sbjct:  136 QQLVKTGFFSDVEFSTLPLSSGMLSALAKLNFVMTTKIQAQAIPPLLAGEDMVGAAKTGSGKTLAFLVPVLECLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDVIENGNLKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTKGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIRNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDMPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYL 511          
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A835ZG10_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG10_9STRA)

HSP 1 Score: 610 bits (1574), Expect = 2.310e-213
Identity = 306/388 (78.87%), Postives = 342/388 (88.14%), Query Frame = 0
Query:    3 GAASGPQASEEQLAKPGFFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKM--KQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 387
            G A+   A+     K GFFSE +F  LPL+     ALK L+F   TK+QA  IPPLL+G+DLVGAAKTGSGKTLAF++PVLE+L KV W  R GT C++ISPTRELSLQTYGVLRD  EAG    + THGLLIGGANRRAEAERL+KGV ILVVTPGRLLDHLQNTKGF+F NMQ+LVIDEADRILEQGFEEEMH IIK+LP+ERQTMLFSATQTKKVEDLARLSI++KP+YVGVDDAEQESTV+GLEQGYVVCPS+KRFLLLFTFLKKN  KK+MVFFSSCNSV +H+ELLNYID+PVM+IHGRQKQQKRTT+FFQFC+Q+TG+LLCTDVAARGLDIP VDWIIQYDPPDQTAEYIHRVGRTARG +G GRALLFLLP+EVGFLR+L
Sbjct:  182 GQAAPAAAASGSTGKKGFFSEERFDSLPLSAGTQAALKDLNFVTMTKIQAQAIPPLLSGQDLVGAAKTGSGKTLAFLLPVLEMLEKVMWGGRQGTACVVISPTRELSLQTYGVLRDLCEAGAGGGRHTHGLLIGGANRRAEAERLMKGVAILVVTPGRLLDHLQNTKGFVFHNMQMLVIDEADRILEQGFEEEMHQIIKILPRERQTMLFSATQTKKVEDLARLSIRDKPIYVGVDDAEQESTVEGLEQGYVVCPSEKRFLLLFTFLKKNRNKKVMVFFSSCNSVNYHAELLNYIDIPVMNIHGRQKQQKRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDQTAEYIHRVGRTARGSTGAGRALLFLLPQEVGFLRYL 569          
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A7S1XXW2_9STRA (RNA helicase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW2_9STRA)

HSP 1 Score: 564 bits (1453), Expect = 3.870e-197
Identity = 282/376 (75.00%), Postives = 324/376 (86.17%), Query Frame = 0
Query:   13 EQLAKPGFFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 387
            E+  +PGFFS+  F  L L++    AL    +   TK+QA +IPPLL G+DL+GAAKTGSGKTLAF++P +ELL +V+++ RNGTG I+ISPTREL+LQ YGVLR+  E     QTHGL+IGGANRR EAE+L KGVNILV TPGRLLDHLQNT+GF FRN+Q+LVIDEADRILEQGFEE+MHAIIK LPK RQT+LFSATQT+KVEDLARLSI+  PVYVGVDD ++ STV GLEQGYVVCPS  RFLLLFTFLKKN K+K+MVFFSSCN+VK+H+ELLNYIDVPVMDIHGRQKQQ+RT++FFQFCK DTG+LLCTDVAARGLDIP VDWI+QYDPPDQ AEYIHRVGRTARG SG GRALLFL PEEVGFLR+L
Sbjct:   47 EKKHRPGFFSKAAFSSLDLSEGTARALAENGYERMTKIQAKSIPPLLTGKDLLGAAKTGSGKTLAFLVPAVELLSRVRFTTRNGTGVIVISPTRELALQIYGVLRELCE--HHNQTHGLVIGGANRRTEAEKLAKGVNILVATPGRLLDHLQNTRGFNFRNLQMLVIDEADRILEQGFEEDMHAIIKTLPKTRQTVLFSATQTRKVEDLARLSIEGDPVYVGVDDGDRVSTVQGLEQGYVVCPSANRFLLLFTFLKKNRKRKVMVFFSSCNAVKYHAELLNYIDVPVMDIHGRQKQQRRTSTFFQFCKADTGILLCTDVAARGLDIPAVDWIVQYDPPDQPAEYIHRVGRTARGPSGDGRALLFLAPEEVGFLRYL 420          
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: W7U0G2_9STRA (RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0G2_9STRA)

HSP 1 Score: 561 bits (1446), Expect = 2.120e-193
Identity = 280/369 (75.88%), Postives = 318/369 (86.18%), Query Frame = 0
Query:   20 FFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 387
            FF+   F DLP++D    ALK L F   T +Q+  IPPLLAG+D+V AAKTGSGKTLAF++PV+ELL KVKW+ RNGTG IIISPTRELS+Q YGVLRD  + G    THGL++GGANRRAEAERLVKGV+ILV TPGRLLDHLQNTKGFL RN+Q+LVIDEADRILEQGFEE+MH IIK LPK RQTMLFSATQTKKVEDL RLS++ +PV+VG  +    +TV GLEQGYVVCPSDKRFLLLFTFLK+N ++KIMVFFSSCNSVKFH+ELLNYID+PVMDIHGRQKQQ+RTT+FFQFC+QD G+LLCTDVAARGLDIP VDWIIQYDPPD   EYIHRVGRTARG +G+GRALLFL  EEVGFL++L
Sbjct:  241 FFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYL 609          
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A7S2KTK2_9STRA (RNA helicase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KTK2_9STRA)

HSP 1 Score: 543 bits (1398), Expect = 2.150e-188
Identity = 277/384 (72.14%), Postives = 315/384 (82.03%), Query Frame = 0
Query:    9 QASEEQLAKPGFFSETK----FGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 387
            +A+E    KP FF+ +     F  LPLTD    AL  L F   T++QA +IP LLAG+D+VGAAKTGSGKTLAF+IPV+ELL K K++ R GTG I+ISPTRELSLQ YGVLRD + +G   QTHGL+IGGANR+ EA++L KGVNIL+ TPGRLLDHLQNT  F++ NM  LVIDEADRILEQGFEE+M AI++LLPK+RQTMLFSATQTKKVEDLARLSI++  VYV V    + +T  GLEQG+V CPSDKRFLLLFTFLKKN KKKIMVFFSSCNSVKFHSELLNYID+PVMDIHGRQKQQKRTT+FFQF K  TG LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG +G GRALLFL PEE GFL++L
Sbjct:   64 KATESSSEKPNFFAHSDDKGLFTALPLTDATQKALAELSFTRMTQIQAQSIPSLLAGKDIVGAAKTGSGKTLAFLIPVIELLFKAKFTTRRGTGAIVISPTRELSLQIYGVLRDLITSGGHNQTHGLIIGGANRKTEADKLGKGVNILIATPGRLLDHLQNTSRFVYHNMLCLVIDEADRILEQGFEEDMRAILRLLPKQRQTMLFSATQTKKVEDLARLSIQSSAVYVEVASETKLATAAGLEQGFVTCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFMKDKTGTLLCTDVAARGLDIPEVDWIIQFDPPDDPKEYIHRVGRTARGATGSGRALLFLTPEETGFLKYL 447          
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A7S2PMU9_9STRA (RNA helicase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PMU9_9STRA)

HSP 1 Score: 538 bits (1386), Expect = 3.070e-186
Identity = 269/378 (71.16%), Postives = 314/378 (83.07%), Query Frame = 0
Query:   17 KPGFFS-----ETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKP-VYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 387
            KP F++     + +F  LPL++   TAL  + F   T++QA +IPPLLAG+DL+GAAKTGSGKTLAF++P++ELLH  K+ +RNGTG I+ISPTREL++Q YGV +D   +GK +QT+GL++GGANRR EAERL KGVNI++ TPGRLLDHLQNTKGF+FRN+   V+DEADRILEQGFEE++ AIIK LPK+RQTMLFSATQTKKVEDLAR +I +K  +YV V +    +T  GLEQGYV  PSD+RFLLLFTFLKKN  KKIMVFFSSCNSVKFHSELLNYID+PVMDIHGRQKQQKRTT+FFQFCKQ TG LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG  G GRALLFL PEE GFLR+L
Sbjct:   90 KPNFYAGKDGADDRFSTLPLSENTQTALSAMGFTRMTQIQAMSIPPLLAGKDLIGAAKTGSGKTLAFLLPIVELLHNAKFGSRNGTGAIVISPTRELAMQIYGVCKDLCSSGKHQQTYGLIMGGANRRTEAERLAKGVNIVIATPGRLLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEEDLRAIIKALPKQRQTMLFSATQTKKVEDLARTAIDHKSAIYVEVPNETSLATAAGLEQGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGDKGTGRALLFLTPEETGFLRYL 467          
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A484E1C0_BRELC (RNA helicase n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484E1C0_BRELC)

HSP 1 Score: 537 bits (1384), Expect = 3.270e-186
Identity = 267/376 (71.01%), Postives = 319/376 (84.84%), Query Frame = 0
Query:   13 EQLAKPGFFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 387
            E +    +FS   F  LPL++    AL  + F+  TK+Q+ +I PLLAG+DL+GAAKTGSGKTL+F+IP +ELLHKV+++ R GTGCI+ISPTREL+LQ YGV+RD  +     QTHG+++GGANRRAEAERLVKGVNIL+ TPGRLLDHLQNTK F++ N+QILVIDEADRIL  GFEEEM  IIK +PKERQTMLFSATQTKKVEDLARLSIK+KPVYVGV++ + ++TV  LEQGYVV PSDKRFLLLFTFLKKN KKK+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ KRTT+FFQFC   TG+LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG +G+G+ALL LLP+E+GFL++L
Sbjct:   74 ESIVDKRYFSSEDFSSLPLSEPTRKALTDMGFSKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAIELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKYHS--QTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKDKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNTKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGANGKGKALLMLLPDELGFLKYL 447          
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A0W8CWR6_PHYNI (RNA helicase n=13 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8CWR6_PHYNI)

HSP 1 Score: 535 bits (1379), Expect = 5.740e-186
Identity = 266/369 (72.09%), Postives = 315/369 (85.37%), Query Frame = 0
Query:   20 FFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 387
            +FS  +F  LPL++    AL  + F   TK+Q+ +I PLLAG+DL+GAAKTGSGKTL+F+IP +ELLHKV+++ R GTGCI+ISPTREL+LQ YGV+RD  +     QTHG+++GGANRRAEAERLVKGVNIL+ TPGRLLDHLQNTK F++ N+QILVIDEADRIL  GFEEEM  IIK +PKERQTMLFSATQTKKVEDLARLSIK KPVYVGV++ + ++TV  LEQGYVV PSDKRFLLLFTFLKKN KKK+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ KRTT+FFQFC   TG+LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG  G+G+ALL LLP+E+GFL++L
Sbjct:  102 YFSSEEFASLPLSEPTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKYHS--QTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYL 468          
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: H3G649_PHYRM (RNA helicase n=2 Tax=Peronosporaceae TaxID=4777 RepID=H3G649_PHYRM)

HSP 1 Score: 531 bits (1368), Expect = 1.190e-185
Identity = 264/363 (72.73%), Postives = 311/363 (85.67%), Query Frame = 0
Query:   26 FGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 387
            F  LPL+D    AL  + F+  TK+Q+ +I PLLAG+DL+GAAKTGSGKTL+F+IP +ELLHKV+++ R GTGCI+ISPTREL+LQ YGV+RD  +     QTHG+++GGANRRAEAERL KGVNIL+ TPGRLLDHLQNTK F++ N+QILVIDEADRIL  GFEEEM  IIK +PKERQTMLFSATQTKKVEDLARLSIK KPVYVGV++ + ++TV  LEQGYVV PSDKRFLLLFTFLKKN KKK+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ KRTT+FFQFC   TG+LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG  G+G+ALL LLP+E+GFL++L
Sbjct:    3 FASLPLSDPTRKALADMGFSKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAIELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKYHS--QTHGIVMGGANRRAEAERLAKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYL 363          
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A5D6YCV7_9STRA (RNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCV7_9STRA)

HSP 1 Score: 536 bits (1382), Expect = 1.730e-185
Identity = 268/369 (72.63%), Postives = 315/369 (85.37%), Query Frame = 0
Query:   20 FFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 387
            +FS   FG LPL++    AL  + F   TK+QA +I PLLAG+DL+GAAKTGSGKTL+F+IP +ELLHKVK++ R GTGCI+ISPTREL+LQ YGV+R+  +     QTHG+++GGANRRAEAERLVKGVNIL+ TPGRLLDHLQNTK F++ N+Q+LVIDEADRIL  GFE+EM  IIK +PKERQTMLFSATQTKKVEDLARLSIK+KPVYVGV++ + ++TV  LEQGYVV PSDKRFLLLFTFLKKN KKK+MVFFSSC +VKF+ ELLNYID+PVMDIHG+QKQ KRTT+FFQFC   TG+LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG  G+G+ALL LLPEE+GFL++L
Sbjct:  111 YFSAEDFGSLPLSEPTKKALADMGFEKMTKIQAKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVKFTARKGTGCIVISPTRELALQIYGVVREICKYHS--QTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFVYHNLQVLVIDEADRILSIGFEDEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKDKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCAAVKFYGELLNYIDIPVMDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPEELGFLKYL 477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJL1_ECTSI2.240e-23588.56RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835ZG10_9STRA2.310e-21378.87RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S1XXW2_9STRA3.870e-19775.00RNA helicase n=1 Tax=Phaeomonas parva TaxID=124430... [more]
W7U0G2_9STRA2.120e-19375.88RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S2KTK2_9STRA2.150e-18872.14RNA helicase n=1 Tax=Leptocylindrus danicus TaxID=... [more]
A0A7S2PMU9_9STRA3.070e-18671.16RNA helicase n=1 Tax=Skeletonema marinoi TaxID=267... [more]
A0A484E1C0_BRELC3.270e-18671.01RNA helicase n=2 Tax=Peronosporaceae TaxID=4777 Re... [more]
A0A0W8CWR6_PHYNI5.740e-18672.09RNA helicase n=13 Tax=Peronosporaceae TaxID=4777 R... [more]
H3G649_PHYRM1.190e-18572.73RNA helicase n=2 Tax=Peronosporaceae TaxID=4777 Re... [more]
A0A5D6YCV7_9STRA1.730e-18572.63RNA helicase n=1 Tax=Pythium brassicum TaxID=14850... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 43..249
e-value: 4.1E-48
score: 175.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 54..231
score: 31.534
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 285..366
e-value: 1.1E-23
score: 94.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 262..365
e-value: 7.1E-24
score: 84.3
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 245..387
score: 19.228
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 50..220
e-value: 1.7E-44
score: 151.7
NoneNo IPR availableGENE3D3.40.50.300coord: 242..387
e-value: 2.3E-43
score: 150.5
NoneNo IPR availableGENE3D3.40.50.300coord: 18..235
e-value: 2.1E-67
score: 228.4
NoneNo IPR availablePANTHERPTHR24031:SF634ATP-DEPENDENT RNA HELICASE DDX18coord: 33..385
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 33..385
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 177..185
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 24..52
score: 7.427
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 95..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12485contigH-elongata_contig12485:1860..8574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12485.1871.1mRNA_H-elongata_contig12485.1871.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12485 1860..8574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12485.1871.1 ID=prot_H-elongata_contig12485.1871.1|Name=mRNA_H-elongata_contig12485.1871.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=387bp
AGGAASGPQASEEQLAKPGFFSETKFGDLPLTDTALTALKTLDFAIATKV
QATIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCII
ISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNI
LVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLL
PKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGY
VVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMD
IHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPD
QTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase