prot_H-elongata_contig12484.1868.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12484.1868.1
Unique Nameprot_H-elongata_contig12484.1868.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length905
Homology
BLAST of mRNA_H-elongata_contig12484.1868.1 vs. uniprot
Match: D8LJ95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ95_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 1.920e-51
Identity = 291/1029 (28.28%), Postives = 396/1029 (38.48%), Query Frame = 0
Query:   39 LDALPTWSLIAQAWCGLILWAISEHRA-GPFFAGDG-----------------------CDNASNAGRNNSKD-QGQDGGATRKTSGGEIE----PLSMLLRWLLYDETIAGEET---VEAVVSKDPAAALNSGGLTSATVEYEVTSTSKRGLNDWKWTLLIALVHVLSS-LRAPKELREGLKTEPVEDCYVKTWMKLPVDVPMSFFQTRLKETSEGAESTNGACVECATARDV--QALVLKDLATSVPLWVALLVGVLEKPCH---------------------RHACD-GQPRRECTGCSRDHGRGAERPESGGFHPSAPCSCSVMFRGGRTSSSPESTLAQVLALSPPRSPARLLLTLARGMAPPLTERVEGDVDDETRARLVMSRSSFISTLGRTWCAEAARNLTEW---MPFCASS---SATDDSLHGEFGITL---------LQRHCRS---DAPGAAFVSVMNERRPDAELLESTADALRSVLKSAGRFLRSPLAEGLATLGKAMENT----CDRGRTCVDDCKIGRKDDHDRLLGAAPMLTE-RGSETQHWRDRWTPNHPPASMEEAFGCRAAKLWRDLFVARGRYSP----GFPSLVKKIAKDCAVLAFC--SGPDEPRQSVVNSSGTTELTQQYVQGKSEAWGFALSQSQQVPKKRGVNAPVLGEVESPS-------------------RCSS-------RASKGTGLLSRPPPMECLPIVLAAAQALLSVA-VNADAKDPGNMRTRAWGAALATLAWTLKSSNQAGGRSTE--------------------SGMESWAAAESATSDVLDCLRALRR---------ADASSG---KKTGQRELVVPVDEVSLVAVSQLVAVGLRFSCPTHGTTLYSGEGRDQ---------IHVKRAAV---CIAANPAVRHEILEVALCVLIGVRGLRRDLLTSPGTLGTLSPMLEAVLE-TPSSIETDSIQSALIDTWNHTFGNL----PGGRAWKKSFPENLHRLLARSAGLTEVRMPPGMTFEAI 905
            L+ LPT  LIA AWCGL  WA+ +  A G    G G                         N + A R+  K+  G    +       E      PL +LL WLL         T   V  V  K       + G   A      + T+ R L  WK  LL AL+  LS  L       E    +       + W+  PVD    F                 AC EC  A  V  Q++  K L +  PLW+ LL GVL   C                      R AC  G PR E  G + D  RG      GG    + C  S +F         +S L   L+LSP   PA+LL +L  G+        +G   +E    LV++        GR W AEAARNL EW   +P    S   +A      G  G+TL         +  H R+      GA       +R+P   L  +TA+ LR +L +A      P      +  K  E      CD G   V     G +++    +G A      RG +++ W      +   A++E  FG   A+LW  LF AR R SP    GF  LVK +AKDC   AF    GP      +                    WG   SQ+Q  P +     P  G+ E                      +CS+       + + G   L+ PPP   LP++ AAA ALL+ A   ADAK  G    RAW A  ATLAWTL ++                             +G+ +     +  ++V  CL A+R          AD++ G   + +       P+D  SL  V +L+AV +R S  T G    + +   +               AV    +AA+PAVR EI  +  C L       R +  SPG L  LSP+LEAVL+ + SS + DS+QS+L+D WN TFG +    P   AWK +F  +L R L+  +   EV MP G+T   +
Sbjct:  141 LEVLPTSGLIANAWCGLAFWAMEQAAAAGLDVQGTGKGXSGPXXXXXXXXXXXXXXXXXXXNTAAAARDCRKEGSGPSSSSAAPPKENEASEAGRPLQVLLEWLLGVRARPSTGTGAKVTTVTEKAVPGGSTAEGRGKAAANPASSPTTDR-LARWKVALLAALIRGLSRRLDVQNAETEAGADDADAKLPERAWLDAPVDSSSVF-------DGWSCAGDCPACAECLPAGGVIRQSISRKWLKSETPLWLVLLTGVLRGRCGLEYRCLDGSGGGGSGGESRVVREACHKGNPRHE-PGVATDGTRGG-----GG----SACQFSPVFLS-------QSFLGGALSLSPGGWPAQLLASLLTGV-----RSAKGRTQEEEDLALVVA--------GRVWRAEAARNLAEWNRCLPLSTDSYVGAAGAGFDGGAQGVTLGGDRYRGGPVAPHARTVGISVSGADVQQKQQQRQPSENLRTATANTLRFLLHAACSLFSRPPERNTRSQSKESEGAAGQACDPGNRTV--VSTGVQNEAREAVGVAEHDGNLRGEDSRGWSQGGKRS---AAVESVFGAETARLWLGLFEAR-RNSPAQPKGFSKLVKALAKDCGNCAFVVSGGP------LGGXXXXXXXXXXXXXXXXAVWGLDFSQTQP-PSQXXXXQPRTGQREPGDFASSTQGDKTAGAAATRYDKCSNTDHPEGKKQNGGGDTLAPPPPFVALPVLAAAALALLTAAPAEADAKAKG----RAWKAGSATLAWTLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGVAAGEEGATIPAEVCQCLGAVRSCLTVAVAAAADSAGGGPNRSSSSGTAGFPLDRDSLAPVCRLLAVAVRTSYATAGGAAAAADAGPEPSPGSLIQAAPSSSTAVGIEVVAADPAVRPEIRGLVACALSA----SRKVAASPGLLTALSPLLEAVLDVSSSSCDADSLQSSLLDVWNATFGKINLKQPPAPAWKAAFSPSLLRRLSDLSQRAEVEMPRGITLPVL 1110          
BLAST of mRNA_H-elongata_contig12484.1868.1 vs. uniprot
Match: A0A6H5K7Y3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Y3_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 4.140e-48
Identity = 274/944 (29.03%), Postives = 365/944 (38.67%), Query Frame = 0
Query:  104 EPLSMLLRWLLYDETIAGEET---VEAVVSKDPAAALNSGGLTSATVEYEVTSTSKRGLNDWKWTLLIALVHVLSSLRAPKELREGLKTEPVEDCYVK----TWMKLPVDVPMSFFQTRLKETSEGAESTNGACVECATARDV--QALVLKDLATSVPLWVALLVGVLEKPCH---------------------RHACD-GQPRRECTGCSRDHGRGAERPESGGFHPSAPCSCSVMFRGGRTSSSPESTLAQVLALSPPRSPARLLLTLARGMAPPLTERVEGDVDDETRARLVMSRSSFISTLGRTWCAEAARNLTEW---MPFCASS---SATDDSLHGEFGITL---------LQRHCRSDAPGAAFVSVMNER----------RPDAELLESTADALRSVLKSAGRFLRSPLAEGLATLGK----AMENTCDRGRTCVDDCKIGRKD----DHDRLLGAAPMLTERGSETQHWRDRWTPNHPPASMEEAFGCRAAKLWRDLFVARGRYSP----GFPSLVKKIAKDCAVLAFCS----------GPDEPRQSVVNSSGTTELTQQYVQ--------------GKSEAWGFALSQSQQVPKKRGVNAPVLGEVESPSRCSSRASKGTG-LLSRPPPMECLPIVLAAAQALLSVA-VNADAKDPGNMRTRAWGAALATLAWTLKSSNQAGGR--------------STESGMESWAAAESATSDVLDCLRALRRA-------------DASSGKKTGQRELVVPVDEVSLVAVSQLVAVGLRFSCPTHGTTLY------SGEGRDQIHVKRAA----------VCIAANPAVRHEILEVALCVLIGVRGLRRDLLTSPGTLGTLSPMLEAVLETPSS-IETDSIQSALIDTWNHTFGNL----PGGRAWKKSFPENLHRLLARSAGLTEVRMPPGMTFEAI 905
            +PL +LL WLL         T   V  V  K       + G   A      + T+ R L  WK  LL AL+  LS      ++++       +D   K     W+  PVD   S F  RL            AC EC  A  V  Q++  K L +  PLW+ LL GVL   C                      R AC  G PR E +G + D  RG            + C  S +F        P+S LA  L+LSP   PA+LL +L  G         +G   +E    LV++        GR W AEAARNL EW   +P    S   +A      G  G+T          +  H R+    AA V V              +P   L   TA+ LR  L +A      P      +  K    A    CD          +  +     DHD  L        RG  +  W +    +    ++E  FG  AA+LW  LF AR R SP    GF  LVK ++KDC   AF +          G  E   S V   G   L     Q              G+ E+  FA S   Q  K  G  A    +  +      +   G G  L+ P P   LP++ AAA ALL+ A   ADAK  G    RAW A  ATLAWTL ++  A G               S+ +G+ +     +  ++V  CL A+                     + +       P+D  SL  V +L+AV +R S  T            +G       + RA+          V +AA+PAVR EI  +  C L       R +  SPG L  LSP+LEAVL+ PSS  + DS+QS+L+D WN TFG L    P   AWK +F   L R L+  +   EV MPPG+T   +
Sbjct:  571 QPLQVLLEWLLGVRARPSTGTSAKVTTVTEKAVPGGSTAEGRGKAAANSASSPTTDR-LARWKEALLAALIRGLSRRL---DVQDNEAEAGADDANAKLPGRAWLDAPVD-SSSVFDGRL------CAGDCPACAECLPAGGVIRQSISRKWLKSETPLWLVLLTGVLRGRCGLEYRCLDGGXXXXXXXXSRVVREACHKGNPRHE-SGSATDGTRGGGE---------SACQFSPVFL-------PQSFLAGALSLSPGGWPAQLLASLLTG-----ARSAKGRTQEEEDLALVVA--------GRVWRAEAARNLAEWNRCLPLSTDSYVGAAGAGFDGGVQGVTPGGDRYKGGPVAPHARTVGTSAAGVDVQKXXXXXXXXXXXXQPSKNLRTDTANTLRFSLHAACSLFSHPPEGNTRSQSKEPKGATGQACDLESRAAGSTGVQNEGAAIADHDGNL--------RGGASGGWSEGGKRS---VAVESFFGAEAARLWLGLFEAR-RNSPAQPKGFSKLVKALSKDCGNCAFVASWGPLGGGKGGAGEGGSSAVPPPGAWGLDFSQTQPPXXXXXXXXXPRTGQRESGDFASSM--QGDKTAGAAAMRYDKRSNTDHPEGKKQNGGGDALAPPXPFVALPVLAAAALALLTAAPAEADAKARG----RAWKAGSATLAWTLTAAAAAPGTTAWPPPASXXXXQWSSAAGLAAGEEGATVPAEVCQCLCAVHSCLKVAAXXXXXXXXXXXLNRSSSSGTAGFPLDGDSLAPVCRLLAVAVRTSYSTAXXXXXXXXXXDAGPESSSGSLVRASFSSSTASGTEVVVAADPAVRLEIRGLVACALSA----SRKVAASPGLLTALSPLLEAVLDVPSSSCDADSLQSSLLDVWNATFGKLNLKQPPAPAWKAAFSPALLRRLSDLSRRAEVEMPPGITLPVL 1451          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12484.1868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ95_ECTSI1.920e-5128.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7Y3_9PHAE4.140e-4829.03Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12484contigH-elongata_contig12484:5194..8193 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12484.1868.1mRNA_H-elongata_contig12484.1868.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12484 506..8193 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12484.1868.1 ID=prot_H-elongata_contig12484.1868.1|Name=mRNA_H-elongata_contig12484.1868.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=905bp
MSTLQNLMQALSAPGPDIATSSIVATAFPPEAGAPATSLDALPTWSLIAQ
AWCGLILWAISEHRAGPFFAGDGCDNASNAGRNNSKDQGQDGGATRKTSG
GEIEPLSMLLRWLLYDETIAGEETVEAVVSKDPAAALNSGGLTSATVEYE
VTSTSKRGLNDWKWTLLIALVHVLSSLRAPKELREGLKTEPVEDCYVKTW
MKLPVDVPMSFFQTRLKETSEGAESTNGACVECATARDVQALVLKDLATS
VPLWVALLVGVLEKPCHRHACDGQPRRECTGCSRDHGRGAERPESGGFHP
SAPCSCSVMFRGGRTSSSPESTLAQVLALSPPRSPARLLLTLARGMAPPL
TERVEGDVDDETRARLVMSRSSFISTLGRTWCAEAARNLTEWMPFCASSS
ATDDSLHGEFGITLLQRHCRSDAPGAAFVSVMNERRPDAELLESTADALR
SVLKSAGRFLRSPLAEGLATLGKAMENTCDRGRTCVDDCKIGRKDDHDRL
LGAAPMLTERGSETQHWRDRWTPNHPPASMEEAFGCRAAKLWRDLFVARG
RYSPGFPSLVKKIAKDCAVLAFCSGPDEPRQSVVNSSGTTELTQQYVQGK
SEAWGFALSQSQQVPKKRGVNAPVLGEVESPSRCSSRASKGTGLLSRPPP
MECLPIVLAAAQALLSVAVNADAKDPGNMRTRAWGAALATLAWTLKSSNQ
AGGRSTESGMESWAAAESATSDVLDCLRALRRADASSGKKTGQRELVVPV
DEVSLVAVSQLVAVGLRFSCPTHGTTLYSGEGRDQIHVKRAAVCIAANPA
VRHEILEVALCVLIGVRGLRRDLLTSPGTLGTLSPMLEAVLETPSSIETD
SIQSALIDTWNHTFGNLPGGRAWKKSFPENLHRLLARSAGLTEVRMPPGM
TFEAI
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