prot_H-elongata_contig124579.1850.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig124579.1850.1
Unique Nameprot_H-elongata_contig124579.1850.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length95
Homology
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BLAST of mRNA_H-elongata_contig124579.1850.1 vs. uniprot
Match: D7G574_ECTSI (RME-8_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G574_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 2.680e-38
Identity = 77/94 (81.91%), Postives = 83/94 (88.30%), Query Frame = 0 
Query:    1 FAARFFVTRLGFMRRKCRHMMAFTSDRLYILKFDDGKAKASYPLKTVQLASSDKVNQEKGIILTSDIGNVRHSYKFPNRTSLLPAFYELQDAAQ 94
            FAARFFVTRLGFMRRKCR MMAFTSDRL+I++ DDGKAKASYPLK+VQLA SDK    KGIILTSDIGNVRHS+K  NRTSLL AF ELQDAA+
Sbjct:   79 FAARFFVTRLGFMRRKCRRMMAFTSDRLFIVRVDDGKAKASYPLKSVQLAPSDK---GKGIILTSDIGNVRHSFKCRNRTSLLAAFAELQDAAR 169
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124579.1850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G574_ECTSI2.680e-3881.91RME-8_N domain-containing protein n=2 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig124579contigH-elongata_contig124579:1486..1770 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig124579.1850.1mRNA_H-elongata_contig124579.1850.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig124579 1486..1770 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig124579.1850.1 ID=prot_H-elongata_contig124579.1850.1|Name=mRNA_H-elongata_contig124579.1850.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
FAARFFVTRLGFMRRKCRHMMAFTSDRLYILKFDDGKAKASYPLKTVQLA
SSDKVNQEKGIILTSDIGNVRHSYKFPNRTSLLPAFYELQDAAQ*
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