prot_H-elongata_contig1245.1839.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1245.1839.1
Unique Nameprot_H-elongata_contig1245.1839.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig1245.1839.1 vs. uniprot
Match: A0A6H5KZ03_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ03_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 4.170e-20
Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    3 RAQELATEILLKKAFPKDGPPPSECTMMDMGSSYGTLARNAVKSYGCTVVCIELAPASNMVNAKRSAAAGLSEKIIIPGER 83
            RA  L+T  LL K FP      +  T+MDMGS++G+ AR A K +GC VVCI+++   N VNAK SAAAGLS+KIIIPGER
Sbjct:   33 RATALSTRGLLGKVFPPSPGGETTMTVMDMGSAHGSTARTAAKEHGCNVVCIDISRGFNTVNAKLSAAAGLSDKIIIPGER 113          
BLAST of mRNA_H-elongata_contig1245.1839.1 vs. uniprot
Match: D8LE22_ECTSI (Probable glycine-sarcosine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE22_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 3.000e-18
Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    3 RAQELATEILLKKAFPKD-GPPPSECTMMDMGSSYGTLARNAVKSYGCTVVCIELAPASNMVNAKRSAAAGLSEKIIIPGER 83
            RA  L+T  LL K FP   G   +  T+MDMGS++G+ AR A K +GC VVCI+++   N VNAK SAAAGLS+KIIIPGER
Sbjct:   31 RATALSTRGLLGKVFPPSPGGETTIMTVMDMGSAHGSTARTAAKEHGCNVVCIDISRGFNAVNAKLSAAAGLSDKIIIPGER 112          
BLAST of mRNA_H-elongata_contig1245.1839.1 vs. uniprot
Match: A0A835YZA4_9STRA (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.200e-14
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    6 ELATEILLKKAFPKDGPPPSECTMMDMGSSYGTLARNAVKSYGCTVVCIELAPASNMVNAKRSAAAGLSEKIIIPGER 83
            +LA+E+  K+ F    P  S   +MDMGS+YG  AR   K+YGCTV CI+++   N VN   +AA GL++K++IPGER
Sbjct:   60 KLASELSAKRLFATAEPLDSSSKVMDMGSAYGGNARLCAKTYGCTVTCIDISCKENEVNRSTTAAEGLADKVLIPGER 137          
BLAST of mRNA_H-elongata_contig1245.1839.1 vs. uniprot
Match: A0A6T8NTF3_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8NTF3_HEMAN)

HSP 1 Score: 58.2 bits (139), Expect = 5.580e-8
Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   31 DMGSSYGTLARNAVKSYGCTVVCIELAPASNMVNAKRSAAAGLSEKIIIPGE 82
            DMG++YG  AR+    YGC V+C+E++   N  N K++A AGL +K++IP E
Sbjct:  106 DMGAAYGEAARHCASKYGCKVLCVEVSKKENEFNRKKTAEAGLQDKVLIPKE 157          
BLAST of mRNA_H-elongata_contig1245.1839.1 vs. uniprot
Match: A0A6H5KF52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF52_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 6.110e-6
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
Query:   51 VVCIELAPASNMVNAKRSAAAGLSEKIIIPGERC 84
            VVCI+++   N VNAK SAAAGLS+KIIIPGERC
Sbjct:   20 VVCIDISRGFNTVNAKLSAAAGLSDKIIIPGERC 53          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1245.1839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KZ03_9PHAE4.170e-2056.79Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LE22_ECTSI3.000e-1857.32Probable glycine-sarcosine methyltransferase n=1 T... [more]
A0A835YZA4_9STRA3.200e-1447.44Putative sarcosine-dimethylglycine methyltransfera... [more]
A0A6T8NTF3_HEMAN5.580e-846.15Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A6H5KF52_9PHAE6.110e-673.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 1..80
e-value: 2.1E-7
score: 32.4
NoneNo IPR availablePFAMPF02353CMAScoord: 2..76
e-value: 2.7E-4
score: 20.4
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 2..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1245contigH-elongata_contig1245:1266..2101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1245.1839.1mRNA_H-elongata_contig1245.1839.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1245 792..2619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1245.1839.1 ID=prot_H-elongata_contig1245.1839.1|Name=mRNA_H-elongata_contig1245.1839.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
MHRAQELATEILLKKAFPKDGPPPSECTMMDMGSSYGTLARNAVKSYGCT
VVCIELAPASNMVNAKRSAAAGLSEKIIIPGERCVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases