prot_H-elongata_contig124475.1837.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig124475.1837.1
Unique Name	prot_H-elongata_contig124475.1837.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	135

Homology

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BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot
Match: A0A7S2AR06_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AR06_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.390e-50
Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = 0

Query:    1 SGLVSSCQNGGICSAKDDCTCVTADSVLWQVYEDANRDLTGWTGTDCSMPICVQGFFDPFCTDLPQAPGGEVNLSSALRRGDGCFRCSNGGVCSAPDHCDCAEGWKGYDCRTPICEV 117
            SG ++ C+NGGIC+ KDDC C+   SVLW+ Y ++ R +TGWTGTDCS+P+C+QGFFDPFCTDL QAPGGE           GC+RC+NGG C+APD C CAEGW GYDC+TP+CE+
Sbjct:  223 SGAITGCENGGICTWKDDCFCIQTLSVLWRAYPESPRGITGWTGTDCSLPMCIQGFFDPFCTDLDQAPGGE-----------GCYRCANGGYCTAPDTCTCAEGWTGYDCKTPVCEM 328

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BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot
Match: D8LSI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI8_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.890e-49
Identity = 83/151 (54.97%), Postives = 91/151 (60.26%), Query Frame = 0

Query:    7 CQNGGICSAKDDCTC----------------------------------------VTADSVLWQVYEDANRDLTGWTGTDCSMPICVQGFFDPFCTDLPQAPGGEVNLSSALRRGDGCFRCSNGGVCSAPDHCDCAEGWKGYDCRTPICEV 117
            C NGG C A D C+C                                        VTADS+LWQVYE+ANRD+TGWTGTDCSMP+C QGFFDPFCTDLPQAPGGE           GCFRC NGGVC+APDHC CA+GW GYDCRTP+CEV
Sbjct: 1845 CHNGGSCLAPDTCSCPDGWDGYDCNTPLCRHLQPSGXXXXXXXXXXXXXXXXXXXVTADSILWQVYEEANRDITGWTGTDCSMPMCAQGFFDPFCTDLPQAPGGE-----------GCFRCPNGGVCTAPDHCSCADGWTGYDCRTPVCEV 1984

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BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot
Match: A0A7S3UTA0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTA0_HETAK)

HSP 1 Score: 173 bits (439), Expect = 3.030e-48
Identity = 74/125 (59.20%), Postives = 90/125 (72.00%), Query Frame = 0

Query:    2 GLVSSCQNGGICSAKDDCTCVTADSVLWQVYEDANRDLTGWTGTDCSMPICVQGFFDPFCTDLPQAPGGEVNLSSALRRGDGCFRCSNGGVCSAPDHCDCAEGWKGYDCRTPICEVGWCVLERSD 126
            G V+SCQNGG C AKD+C CV  +S+LW+V+EDA R  TGW GTDCS P+C QG++DPFC DLP+AP GE           GC+RC+NGG C+APD C CAEGW GYDCR P+CEV   +L R +
Sbjct:  389 GAVTSCQNGGQCVAKDNCQCVLTESLLWEVHEDAPRGWTGWAGTDCSTPVCAQGYYDPFCHDLPEAPAGE-----------GCYRCANGGNCTAPDLCTCAEGWTGYDCREPVCEVVADILTREN 502

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BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot
Match: A0A7R9U1K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1K2_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.780e-45
Identity = 70/116 (60.34%), Postives = 80/116 (68.97%), Query Frame = 0

Query:    2 GLVSSCQNGGICSAKDDCTCVTADSVLWQVYEDANRDLTGWTGTDCSMPICVQGFFDPFCTDLPQAPGGEVNLSSALRRGDGCFRCSNGGVCSAPDHCDCAEGWKGYDCRTPICEV 117
            G V  C NG IC+ +DDC C T DS+L+  Y +A R  TGW GTDCSMPICVQG++DPFCTDL QAP GE           GCFRC+N G C+APD C CA GW GYDCRTP+CE 
Sbjct:  120 GSVHGCING-ICANRDDCACTTTDSLLYLEYPEAERGDTGWAGTDCSMPICVQGYYDPFCTDLAQAPSGE-----------GCFRCANDGYCTAPDVCSCAPGWTGYDCRTPVCEA 223

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BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot
Match: A0A8J2X4X9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4X9_9STRA)

HSP 1 Score: 157 bits (396), Expect = 9.060e-42
Identity = 71/125 (56.80%), Postives = 85/125 (68.00%), Query Frame = 0

Query:    4 VSSCQNGGICSAKDDCTCVTADSVLWQVYEDANRDLTGWTGTDCSMPICVQGFFDPFCTD----LPQAPGGEVNLSSALRRGDGCFRCSNGGVCSAPDHCDCAEGWKGYDCRTPICEVGWCVLER 124
            V++C+NGG+C  KD C CVTA SVL + + +A    TGW GTDC+MPICVQG+FDPFC+     +PQAPGGE           GC+RC NGG C+APD C C EGW GYDCRTP+CE     LER
Sbjct: 2525 VAACENGGVCKEKDTCECVTALSVLHEKFPNAPGGATGWQGTDCTMPICVQGYFDPFCSGPIKGIPQAPGGE-----------GCYRCPNGGYCTAPDTCTCTEGWTGYDCRTPVCERVATPLER 2638

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BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot
Match: A0A7S2FA90_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FA90_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.910e-40
Identity = 65/95 (68.42%), Postives = 73/95 (76.84%), Query Frame = 0

Query:   22 VTADSVLWQVYEDANRDLTGWTGTDCSMPICVQGFFDPFCTDLPQAPGGEVNLSSALRRGDGCFRCSNGGVCSAPDHCDCAEGWKGYDCRTPICE 116
            +T+ S LW+VYEDANR  TGW GTDCSMPIC QGF+DPFCTDL +APGGE           GC+RCSNGG C+APD C CA+GW GYDCRTPICE
Sbjct:  711 ITSPSKLWEVYEDANRGTTGWMGTDCSMPICTQGFYDPFCTDLAEAPGGE-----------GCYRCSNGGNCTAPDTCTCADGWGGYDCRTPICE 794

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BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot
Match: A0A7S3JQX4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQX4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.280e-39
Identity = 73/159 (45.91%), Postives = 86/159 (54.09%), Query Frame = 0

Query:    7 CQNGGICSAKDDCTC-----------------------------------------VTADSVLWQVYEDANRDLTGWTGTDCSMPICVQGFFDPFCTDLPQAPGGEVNLSSALRRGDGCFRCSNGGVCSAPDHCDCAEGWKGYDCRTPICEVGWCVLER 124
            C NGG C A D CTC                                         +   S+L + Y+DA   +TGWTGTDC+MP+CVQGF+DPFCTDLPQAPGGE           GC+RC+NGG C+APD C CAEGW GYDCRTP+CEV    L+R
Sbjct: 1626 CNNGGTCIAPDVCTCKDGWDGFDCSTPLCRHLQTATGVVSGXXXXXXXXXXXXXXXIQVPSILKETYDDAPGGVTGWTGTDCTMPMCVQGFYDPFCTDLPQAPGGE-----------GCYRCANGGNCTAPDTCTCAEGWTGYDCRTPVCEVVATPLQR 1773

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BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot
Match: A0A835Z190_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z190_9STRA)

HSP 1 Score: 144 bits (363), Expect = 2.500e-37
Identity = 65/101 (64.36%), Postives = 71/101 (70.30%), Query Frame = 0

Query:   24 ADSVLWQVYEDANRDLTGWTGTDCSMPICVQGFFDPFCTDLPQAPGGEVNLSSALRRGDGCFRCSNGGVCSAPDHCDCAEGWKGYDCRTPICEVGWCVLER 124
            A+SVLW+VY DA R  TGW GTDCSMP+CVQG FDPFC  LPQAPGGE           GCFRC+NGG C+APD C CA GW GYDCRTP+CE     L R
Sbjct: 1870 AESVLWKVYPDAVRGRTGWGGTDCSMPMCVQGHFDPFCGGLPQAPGGE-----------GCFRCANGGNCTAPDVCACAPGWAGYDCRTPVCEAVADALTR 1959

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BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot
Match: A0A7S2SSM4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSM4_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.670e-37
Identity = 60/117 (51.28%), Postives = 75/117 (64.10%), Query Frame = 0

Query:    1 SGLVSSCQNGGICSAKDDCTCVTADSVLWQVYEDANRDLTGWTGTDCSMPICVQGFFDPFCTDLPQAPGGEVNLSSALRRGDGCFRCSNGGVCSAPDHCDCAEGWKGYDCRTPICEV 117
            SG ++ C  G           VT +S+LW  ++ A R  TG+ G+DCSMP+C QGF+DPFCTDLP+APGGE           GC+RC+NGG C+APD C C  GW GYDCRTP+CE 
Sbjct:   86 SGAITGCLYGXXXXXXXXXXXVTTESILWTKHQGAPRGTTGFAGSDCSMPMCTQGFYDPFCTDLPEAPGGE-----------GCYRCANGGNCTAPDTCTCPSGWTGYDCRTPVCEA 191

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BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot
Match: A0A482T1I0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T1I0_9ARCH)

HSP 1 Score: 141 bits (356), Expect = 2.190e-36
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 0

Query:   22 VTADSVLWQVYEDANRDLTGWTGTDCSMPICVQGFFDPFCTDLPQAPGGEVNLSSALRRGDGCFRCSNGGVCSAPDHCDCAEGWKGYDCRTPICEV 117
            V   SVL++V+E+  +  TGWTG+DCSMPICV G++DPFCTDLPQAPGGE           GC+RC+NGG C+APD C CA GW GYDCRTP+CEV
Sbjct: 1743 VQTPSVLYKVHENTLKGKTGWTGSDCSMPICVHGYYDPFCTDLPQAPGGE-----------GCYRCANGGNCTAPDVCTCAPGWTGYDCRTPVCEV 1827

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot

BLAST of mRNA_H-elongata_contig124475.1837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S2AR06_9STRA	1.390e-50	61.54	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
D8LSI8_ECTSI	1.890e-49	54.97	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S3UTA0_HETAK	3.030e-48	59.20	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7R9U1K2_9STRA	1.780e-45	60.34	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A8J2X4X9_9STRA	9.060e-42	56.80	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S2FA90_9STRA	1.910e-40	68.42	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S3JQX4_9STRA	1.280e-39	45.91	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A835Z190_9STRA	2.500e-37	64.36	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2SSM4_9STRA	2.670e-37	51.28	Hypothetical protein n=2 Tax=Rhizochromulina marin...	[more]
A0A482T1I0_9ARCH	2.190e-36	62.50	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.10.25.10		coord: 86..113 e-value: 2.3E-6 score: 29.3
IPR013032	EGF-like, conserved site	PROSITE	PS01186	EGF_2	coord: 99..110
IPR013032	EGF-like, conserved site	PROSITE	PS00022	EGF_1	coord: 99..110
IPR000742	EGF-like domain	PROSITE	PS50026	EGF_3	coord: 80..111 score: 9.494

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig124475	contig	H-elongata_contig124475:110..981 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig124475.1837.1	mRNA_H-elongata_contig124475.1837.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig124475 110..981 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig124475.1837.1 ID=prot_H-elongata_contig124475.1837.1|Name=mRNA_H-elongata_contig124475.1837.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
SGLVSSCQNGGICSAKDDCTCVTADSVLWQVYEDANRDLTGWTGTDCSMP
ICVQGFFDPFCTDLPQAPGGEVNLSSALRRGDGCFRCSNGGVCSAPDHCD
CAEGWKGYDCRTPICEVGWCVLERSDHFVRSTLFS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013032	EGF-like_CS
IPR000742	EGF-like_dom