prot_H-elongata_contig12419.1819.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12419.1819.1
Unique Nameprot_H-elongata_contig12419.1819.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length166
Homology
BLAST of mRNA_H-elongata_contig12419.1819.1 vs. uniprot
Match: D8LN40_ECTSI (60S ribosomal protein L7a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN40_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 1.150e-96
Identity = 145/165 (87.88%), Postives = 159/165 (96.36%), Query Frame = 0
Query:    1 MKYQPEDKKAKQQRLKEIAAAKEAGKDPAPSKAPKVIKYGLKHVTTLIEEQKASLVIIAHDVDPIELVVWLPALCRKMDVPYCIMKGKARLGTMVHKKNAAVLCLTNVNKEDDSRLNTLKANFSAHFNEGFQRKWGGGIMGLKTKRKLEKRQKAIEAELAKKAQY 165
            MKYQPEDKKAKQQRLKEIAAAKEAGK+PAPSKAPKVIK+GLKHVTTLIEEQKASLV+IAHDV PIELVVWLPALCRKM +PYCIMKGKARLGT+VH+KNAAV+CLT VNKED+S+L+ LK+NF+A FNEGF RKWGGG+MGLKT+RKLEKRQKAIEAELAKKAQY
Sbjct:   92 MKYQPEDKKAKQQRLKEIAAAKEAGKEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVTPIELVVWLPALCRKMGIPYCIMKGKARLGTLVHQKNAAVICLTTVNKEDESKLSNLKSNFTAQFNEGFVRKWGGGVMGLKTQRKLEKRQKAIEAELAKKAQY 256          
BLAST of mRNA_H-elongata_contig12419.1819.1 vs. uniprot
Match: A0A6V1R9A7_HETAK (60S ribosomal protein L7a n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9A7_HETAK)

HSP 1 Score: 220 bits (560), Expect = 1.240e-69
Identity = 119/168 (70.83%), Postives = 141/168 (83.93%), Query Frame = 0
Query:    1 MKYQPEDKKAKQQRLKEIAAAKEA-GKDPAPSKAPKVIKYGLKHVTTLIEEQKASLVIIAHDVDPIELVVWLPALCRKMDVPYCIMKGKARLGTMVHKKNAAVLCLTNVNKEDDSRLNTLKANFSAHFNEGFQRKWGGGIMGLKTKRKLEKRQKAIEAELAKK--AQY 165
            +KYQPE KKAKQQRLKE+AAA    G+ P P+     +KYGLKHVTTLIE+++A LV IAHDV+P+ELVVWLPALCRKM VP+C++K KARLGT+ HKKNAAV+ LT VNKED ++L+TL ANF+A FN+   RKWGGGIMGLKT+RKLEKRQKA+EAELAKK  AQY
Sbjct:   93 VKYQPETKKAKQQRLKEMAAAGATKGEKPGPT-----LKYGLKHVTTLIEQKEAKLVCIAHDVNPLELVVWLPALCRKMGVPFCVVKDKARLGTLCHKKNAAVVALTEVNKEDKAKLDTLGANFTAQFNDTPVRKWGGGIMGLKTQRKLEKRQKALEAELAKKTSAQY 255          
BLAST of mRNA_H-elongata_contig12419.1819.1 vs. uniprot
Match: A0A812TXY1_SYMMI (60S ribosomal protein L7a n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TXY1_SYMMI)

HSP 1 Score: 215 bits (548), Expect = 1.240e-68
Identity = 109/161 (67.70%), Postives = 134/161 (83.23%), Query Frame = 0
Query:    1 MKYQPEDKKAKQQRLKEIAAAKEAGKDPAPSKAPKVIKYGLKHVTTLIEEQKASLVIIAHDVDPIELVVWLPALCRKMDVPYCIMKGKARLGTMVHKKNAAVLCLTNVNKEDDSRLNTLKANFSAHFNEGFQRKWGGGIMGLKTKRKLEKRQKAIEAELAK 161
            +KYQPE K AKQ+RL+  A A  AG++ A    P V+K+GLKH+TTLIE++KASLV+IAHDVDPIELVVWLPALCRKM +P+CI+KGK+RLGT+VHKKN AV+ LT+VNKED S+L+TL+AN  A FNE   RKWGGG MGLKT  KL+KR+K ++AELAK
Sbjct:   30 VKYQPETKAAKQERLENAAKAAAAGENVASGAPPAVLKFGLKHITTLIEQKKASLVVIAHDVDPIELVVWLPALCRKMGIPFCIVKGKSRLGTLVHKKNCAVVALTSVNKEDASKLSTLQANMKAQFNETVVRKWGGGHMGLKTVAKLDKRKKQLDAELAK 190          
BLAST of mRNA_H-elongata_contig12419.1819.1 vs. uniprot
Match: F0Y2N8_AURAN (60S ribosomal protein L7a (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2N8_AURAN)

HSP 1 Score: 205 bits (522), Expect = 6.910e-64
Identity = 108/164 (65.85%), Postives = 128/164 (78.05%), Query Frame = 0
Query:    1 MKYQPEDKKAKQQRLKEIAAAKEAGKDPAPSKAPKVIKYGLKHVTTLIEEQKASLVIIAHDVDPIELVVWLPALCRKMDVPYCIMKGKARLGTMVHKKNAAVLCLTNVNKEDDSRLNTLKANFSAHFNEGFQ--RKWGGGIMGLKTKRKLEKRQKAIEAELAKK 162
            MKYQPEDK AK  R+K +A AK AG      KAP V+K+GLKHVT L+E +KA LV IA DVDPIELVVWLPALC+KMDVPYCI+K K+RLGT+VH+K AAV CLT V KED   L+ L++NF A +N+     RKWGGGIMGLKT+ KL KR+KA++AELAKK
Sbjct:   91 MKYQPEDKAAKADRVKALAEAKAAGGAAPEGKAPTVVKFGLKHVTYLVENKKAKLVCIASDVDPIELVVWLPALCKKMDVPYCIVKNKSRLGTVVHQKTAAVCCLTTVKKEDQHSLDQLRSNFKAMYNDNVAHARKWGGGIMGLKTQAKLAKREKALQAELAKK 254          
BLAST of mRNA_H-elongata_contig12419.1819.1 vs. uniprot
Match: T0QDT5_SAPDV (60S ribosomal protein L7a n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0QDT5_SAPDV)

HSP 1 Score: 205 bits (522), Expect = 9.970e-64
Identity = 111/167 (66.47%), Postives = 131/167 (78.44%), Query Frame = 0
Query:    1 MKYQPEDKKAKQQRLKEIAAAKEAGKDPAPSKAPKVIKYGLKHVTTLIEEQKASLVIIAHDVDPIELVVWLPALCRKMDVPYCIMKGKARLGTMVHKKNAAVLCLTNVNKEDDSRLNTLKANFSAHFNEG--FQRKWGGGIMGLKTKRKLEKRQKAIEAELAKKAQY 165
            +KYQPE K AK QRL++IAA KE    P     P VIKYGL HVT+LIE +KA +V IAHDV PIELVV+LPALCRKMD+PYCI+KGKARLG +VHKKNAAV+ LT VNKED ++ ++L   F A FN+    +RKWGGGIMGLKT++KLE R KA+ AELAKKAQY
Sbjct:  105 LKYQPESKAAKTQRLRDIAAGKEQVSAP-----PAVIKYGLNHVTSLIENKKAKMVCIAHDVTPIELVVFLPALCRKMDIPYCIVKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLNTAFRAQFNDESTHRRKWGGGIMGLKTQKKLELRAKAVAAELAKKAQY 266          
BLAST of mRNA_H-elongata_contig12419.1819.1 vs. uniprot
Match: A0A7S3HBR5_9STRA (60S ribosomal protein L7a n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBR5_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.570e-63
Identity = 103/164 (62.80%), Postives = 129/164 (78.66%), Query Frame = 0
Query:    1 MKYQPEDKKAKQQRLKEIAAAKEAGKDPAPSKAPKVIKYGLKHVTTLIEEQKASLVIIAHDVDPIELVVWLPALCRKMDVPYCIMKGKARLGTMVHKKNAAVLCLTNVNKEDDSRLNTLKANFSAHFNEGFQRKWGGGIMGLKTKRKLEKRQKAIEAELAKKAQ 164
            +KYQPE K AK  RL+ +A A  A +       P  +K+GLKHVTTLIE++KA LV+I HDVDPIELV+WLPALCRKM+VP+ I+KGK+RLGT+ HKK  +V+CLT+VNKED+S+L TL  NF A FN+  +RKWGGGIMGLKT+ KL+KR KA+E E AKKA+
Sbjct:   92 VKYQPETKAAKTTRLEALAQATAAKESTPSGPPPATLKFGLKHVTTLIEQKKAKLVVIPHDVDPIELVLWLPALCRKMNVPFAIVKGKSRLGTLTHKKTCSVVCLTSVNKEDESKLKTLGENFKAQFNDNVERKWGGGIMGLKTQAKLDKRAKALEVEEAKKAE 255          
BLAST of mRNA_H-elongata_contig12419.1819.1 vs. uniprot
Match: A0A6G0X5U8_9STRA (60S ribosomal protein L7a n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0X5U8_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.010e-63
Identity = 110/167 (65.87%), Postives = 130/167 (77.84%), Query Frame = 0
Query:    1 MKYQPEDKKAKQQRLKEIAAAKEAGKDPAPSKAPKVIKYGLKHVTTLIEEQKASLVIIAHDVDPIELVVWLPALCRKMDVPYCIMKGKARLGTMVHKKNAAVLCLTNVNKEDDSRLNTLKANFSAHFNEG--FQRKWGGGIMGLKTKRKLEKRQKAIEAELAKKAQY 165
            +KYQPE K AKQQRLK+IAA KE    P     P VIKYGL HVT+LIE +KA LV+IAHDV P+ELVV+LPALCRKMD+PY I KGKARLG +VHKKNAAV+ LT VNKED ++ ++L   F   FN+    +RKWGGGIMGLKT++KLE R+KA+ AE AKKAQY
Sbjct:  107 LKYQPETKAAKQQRLKDIAAGKEQAAAP-----PAVIKYGLNHVTSLIENKKAKLVVIAHDVTPLELVVFLPALCRKMDIPYAIFKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLATAFRGQFNDETTHRRKWGGGIMGLKTQKKLELREKAVAAEAAKKAQY 268          
BLAST of mRNA_H-elongata_contig12419.1819.1 vs. uniprot
Match: A0A7S0LF41_9EUKA (60S ribosomal protein L7a n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LF41_9EUKA)

HSP 1 Score: 204 bits (518), Expect = 3.250e-63
Identity = 105/164 (64.02%), Postives = 128/164 (78.05%), Query Frame = 0
Query:    1 MKYQPEDKKAKQQRLKEIAAAKEAGKDPAPSKAPKVIKYGLKHVTTLIEEQKASLVIIAHDVDPIELVVWLPALCRKMDVPYCIMKGKARLGTMVHKKNAAVLCLTNVNKEDDSRLNTLKANFSAHFNEGFQRKWGGGIMGLKTKRKLEKRQKAIEAELAKKAQ 164
            +KYQPE K AK  RL+ +A A  A ++      P  +KYGLKHVTTLIE++KA LVII+HDVDPIELV+WLPALCRKM+VP+CI+KGK+RLGT+ HKK  +V+ LT VN ED+S+L TL  N    FNE  +RKWGGGIMGLKT+ KL KR +AIEAELAKKA+
Sbjct:   93 VKYQPETKAAKATRLETLAKATAAKENTTSGPPPATLKYGLKHVTTLIEQKKAKLVIISHDVDPIELVLWLPALCRKMNVPFCIVKGKSRLGTLTHKKTCSVVALTAVNNEDESKLKTLAENCRVQFNENVERKWGGGIMGLKTQAKLTKRAQAIEAELAKKAE 256          
BLAST of mRNA_H-elongata_contig12419.1819.1 vs. uniprot
Match: A0A3R7JAR0_9STRA (60S ribosomal protein L7a n=8 Tax=Peronosporaceae TaxID=4777 RepID=A0A3R7JAR0_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.270e-61
Identity = 105/167 (62.87%), Postives = 131/167 (78.44%), Query Frame = 0
Query:    1 MKYQPEDKKAKQQRLKEIAAAKEAGKDPAPSKAPKVIKYGLKHVTTLIEEQKASLVIIAHDVDPIELVVWLPALCRKMDVPYCIMKGKARLGTMVHKKNAAVLCLTNVNKEDDSRLNTLKANFSAHFNEG--FQRKWGGGIMGLKTKRKLEKRQKAIEAELAKKAQY 165
            +KYQPE K AK  RL+ IAA KE    P     P V+K+GL HVT+L+E +KA LV+IAHDVDPIELVV+LPALCR+ D+PYCI+KGK+RLG +VH+KNAAV+ LT+VNKED ++ ++L   F A FNE    +RKWGGGIMGLKT++KLE R+KA+ AE AKKAQY
Sbjct:  104 LKYQPETKAAKTLRLRNIAAGKEEASAP-----PAVVKFGLNHVTSLVENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKSRLGQLVHQKNAAVVALTHVNKEDKAKFDSLSEAFHAKFNEDSTIRRKWGGGIMGLKTQKKLELREKAVAAEAAKKAQY 265          
BLAST of mRNA_H-elongata_contig12419.1819.1 vs. uniprot
Match: K3WB90_GLOUD (60S ribosomal protein L7a n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WB90_GLOUD)

HSP 1 Score: 199 bits (507), Expect = 2.030e-61
Identity = 109/167 (65.27%), Postives = 130/167 (77.84%), Query Frame = 0
Query:    1 MKYQPEDKKAKQQRLKEIAAAKEAGKDPAPSKAPKVIKYGLKHVTTLIEEQKASLVIIAHDVDPIELVVWLPALCRKMDVPYCIMKGKARLGTMVHKKNAAVLCLTNVNKEDDSRLNTLKANFSAHFNEGF--QRKWGGGIMGLKTKRKLEKRQKAIEAELAKKAQY 165
            +KYQPE K AK  RL+ IAA KE    P     P VIKYGL HVT+LIE +KA LV+IAHDV+PIELVV+LPALCRK D+PY I+KGKARLG +VHKKNAAV+ LT+VNKED S+ ++L + F   FN+    +RKWGGGIMGLKT++KLE R+KAI AE AKKAQY
Sbjct:  108 LKYQPETKAAKTLRLRNIAAGKEEASAP-----PAVIKYGLNHVTSLIENKKAKLVVIAHDVNPIELVVFLPALCRKFDIPYTIVKGKARLGQLVHKKNAAVVALTHVNKEDKSKFDSLASAFKTKFNDDSTTRRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 269          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12419.1819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN40_ECTSI1.150e-9687.8860S ribosomal protein L7a n=2 Tax=Ectocarpus TaxID... [more]
A0A6V1R9A7_HETAK1.240e-6970.8360S ribosomal protein L7a n=2 Tax=Heterosigma akas... [more]
A0A812TXY1_SYMMI1.240e-6867.7060S ribosomal protein L7a n=1 Tax=Symbiodinium mic... [more]
F0Y2N8_AURAN6.910e-6465.8560S ribosomal protein L7a (Fragment) n=1 Tax=Aureo... [more]
T0QDT5_SAPDV9.970e-6466.4760S ribosomal protein L7a n=3 Tax=Saprolegniaceae ... [more]
A0A7S3HBR5_9STRA1.570e-6362.8060S ribosomal protein L7a n=1 Tax=Spumella elongat... [more]
A0A6G0X5U8_9STRA3.010e-6365.8760S ribosomal protein L7a n=8 Tax=Aphanomyces TaxI... [more]
A0A7S0LF41_9EUKA3.250e-6364.0260S ribosomal protein L7a n=1 Tax=Coccolithus braa... [more]
A0A3R7JAR0_9STRA1.270e-6162.8760S ribosomal protein L7a n=8 Tax=Peronosporaceae ... [more]
K3WB90_GLOUD2.030e-6165.2760S ribosomal protein L7a n=2 Tax=Pythiaceae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001921Ribosomal protein L7A/L8PRINTSPR00882RIBOSOMALL7Acoord: 33..53
score: 50.22
coord: 94..118
score: 37.45
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 37..51
score: 36.36
coord: 72..82
score: 68.6
coord: 56..69
score: 69.48
coord: 82..96
score: 51.52
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 32..112
e-value: 1.0E-23
score: 82.8
IPR038524Ribosomal protein L7A/L8 superfamilyGENE3D3.30.1330.210coord: 1..158
e-value: 7.9E-63
score: 213.2
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 7..155
NoneNo IPR availablePANTHERPTHR23105:SF160S RIBOSOMAL PROTEIN L7Acoord: 7..155
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 75..92
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 2..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12419contigH-elongata_contig12419:1680..2942 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12419.1819.1mRNA_H-elongata_contig12419.1819.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12419 346..4582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12419.1819.1 ID=prot_H-elongata_contig12419.1819.1|Name=mRNA_H-elongata_contig12419.1819.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp
MKYQPEDKKAKQQRLKEIAAAKEAGKDPAPSKAPKVIKYGLKHVTTLIEE
QKASLVIIAHDVDPIELVVWLPALCRKMDVPYCIMKGKARLGTMVHKKNA
AVLCLTNVNKEDDSRLNTLKANFSAHFNEGFQRKWGGGIMGLKTKRKLEK
RQKAIEAELAKKAQY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001921Ribosomal_L7A/L8
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR038524Ribosomal_L7A/L8_sf
IPR004037Ribosomal_L7Ae_CS
IPR029064L30e-like