prot_H-elongata_contig124144.1815.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig124144.1815.1
Unique Name	prot_H-elongata_contig124144.1815.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	79

Homology

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BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 2.680e-29
Identity = 53/79 (67.09%), Postives = 62/79 (78.48%), Query Frame = 0

Query:    1 CVPITPVETSWSAPSQDHEGGAMTRTQLPLMLCWAITMHKSQGQTLSMAVIDLGKNESCTGLTFVCLSRGKKLTGLLIE 79
            CVPI+PV+T+W       +GG   RTQLPL LCWAITMHKSQGQTL+ AVIDLG  E+CTGLTFVCLSR K+L  L++E
Sbjct:  168 CVPISPVDTTW------QDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVE 240

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BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 3.300e-28
Identity = 53/79 (67.09%), Postives = 62/79 (78.48%), Query Frame = 0

Query:    1 CVPITPVETSWSAPSQDHEGGAMTRTQLPLMLCWAITMHKSQGQTLSMAVIDLGKNESCTGLTFVCLSRGKKLTGLLIE 79
            CVPI+PV+T+W       +GG   RTQLPL LCWAITMHKSQGQTL+ AVIDLG  E+CTGLTFVCLSR K+L  L++E
Sbjct:  342 CVPISPVDTTW------QDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVE 414

[Close]

BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 3.870e-28
Identity = 53/79 (67.09%), Postives = 62/79 (78.48%), Query Frame = 0

Query:    1 CVPITPVETSWSAPSQDHEGGAMTRTQLPLMLCWAITMHKSQGQTLSMAVIDLGKNESCTGLTFVCLSRGKKLTGLLIE 79
            CVPI+PV+T+W       +GG   RTQLPL LCWAITMHKSQGQTL+ AVIDLG  E+CTGLTFVCLSR K+L  L++E
Sbjct:   59 CVPISPVDTTW------QDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVE 131

[Close]

BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 8.540e-28
Identity = 53/79 (67.09%), Postives = 62/79 (78.48%), Query Frame = 0

Query:    1 CVPITPVETSWSAPSQDHEGGAMTRTQLPLMLCWAITMHKSQGQTLSMAVIDLGKNESCTGLTFVCLSRGKKLTGLLIE 79
            CVPI+PV+T+W       +GG   RTQLPL LCWAITMHKSQGQTL+ AVIDLG  E+CTGLTFVCLSR K+L  L++E
Sbjct: 1473 CVPISPVDTTW------QDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVE 1545

[Close]

BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 2.130e-25
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0

Query:   18 HEGGAMTRTQLPLMLCWAITMHKSQGQTLSMAVIDLGKNESCTGLTFVCLSRGKKLTGLLIE 79
             +GG   RTQLPL LCWAITMHKSQGQTL+ AVIDLG  E+CTGLTFVCLSR K+L  L++E
Sbjct:    8 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVE 69

[Close]

BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 5.270e-25
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0

Query:   18 HEGGAMTRTQLPLMLCWAITMHKSQGQTLSMAVIDLGKNESCTGLTFVCLSRGKKLTGLLIE 79
             +GG   RTQLPL LCWAITMHKSQGQTL+ AVIDLG  E+CTGLTFVCLSR K+L  L++E
Sbjct:    6 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVE 67

[Close]

BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 5.710e-25
Identity = 48/69 (69.57%), Postives = 54/69 (78.26%), Query Frame = 0

Query:   11 WSAPSQDHEGGAMTRTQLPLMLCWAITMHKSQGQTLSMAVIDLGKNESCTGLTFVCLSRGKKLTGLLIE 79
            WS   +D  GG   RTQLPL LCWAITMHKSQGQTL+ AVIDLG  E+CTGLTFVCLSR K+L  L++E
Sbjct:   67 WSTGRKD--GGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVE 133

[Close]

BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.120e-24
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0

Query:   18 HEGGAMTRTQLPLMLCWAITMHKSQGQTLSMAVIDLGKNESCTGLTFVCLSRGKKLTGLLIE 79
             +GG   RTQLPL LCWAITMHKSQGQTL+ AVIDLG  E+CTGLTFVCLSR K+L  L++E
Sbjct:    6 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVE 67

[Close]

BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 2.140e-24
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0

Query:   18 HEGGAMTRTQLPLMLCWAITMHKSQGQTLSMAVIDLGKNESCTGLTFVCLSRGKKLTGLLIE 79
             +GG   RTQLPL LCWAITMHKSQGQTL+ AVIDLG  E+CTGLTFVCLSR K+L  L++E
Sbjct:    3 QDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVE 64

[Close]

BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.320e-23
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0

Query:   18 HEGGAMTRTQLPLMLCWAITMHKSQGQTLSMAVIDLGKNESCTGLTFVCLSRGKKLTGLLIE 79
             +GG   RTQLPL LCWAITMHKSQGQTL+ AVIDLG  E+CTGLTFVCLSR K+L  L++E
Sbjct:    6 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVE 67

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot

BLAST of mRNA_H-elongata_contig124144.1815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JUS2_9PHAE	2.680e-29	67.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFG8_9PHAE	3.300e-28	67.09	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K4U7_9PHAE	3.870e-28	67.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L976_9PHAE	8.540e-28	67.09	ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ...	[more]
A0A6H5KSF1_9PHAE	2.130e-25	72.58	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFN2_9PHAE	5.270e-25	72.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMH2_9PHAE	5.710e-25	69.57	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCP5_9PHAE	1.120e-24	72.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K214_9PHAE	2.140e-24	72.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KN08_9PHAE	1.320e-23	72.58	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23274:SF32	ATP-DEPENDENT DNA HELICASE PIF1	coord: 2..77
None	No IPR available	PANTHER	PTHR23274	DNA HELICASE-RELATED	coord: 2..77
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig124144	contig	H-elongata_contig124144:1008..1244 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig124144.1815.1	mRNA_H-elongata_contig124144.1815.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig124144 1008..1244 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig124144.1815.1 ID=prot_H-elongata_contig124144.1815.1|Name=mRNA_H-elongata_contig124144.1815.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp
CVPITPVETSWSAPSQDHEGGAMTRTQLPLMLCWAITMHKSQGQTLSMAV
IDLGKNESCTGLTFVCLSRGKKLTGLLIE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase