prot_H-elongata_contig124056.1810.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig124056.1810.1
Unique Nameprot_H-elongata_contig124056.1810.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
BLAST of mRNA_H-elongata_contig124056.1810.1 vs. uniprot
Match: A0A6H5L6D7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D7_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.410e-70
Identity = 114/174 (65.52%), Postives = 136/174 (78.16%), Query Frame = 0
Query:    1 FAVIFAASTLLLLSSPTVDARKNS-----QFTIYERQSDDGPRHSPLFTLPVG-GEEGEFPSKMVLFNNDLYGSKDGLIEEDPDEIIGYNQGHCVETVATEGFFAECYFTYVFDGGSLTANGPFNFNADSGNVVSSVLAVTGGTGDYIGAKGEVTLSAGPAEDFASLQFDFDVK 168
            F V  + +  LLL   TV+A +       +FT++ERQSDDGPRHSPLFTLPV   E+ E+PSKMVLFNNDLYGS+D LI+E  D ++GYNQGHCVETVA+ GF AEC+FTYVFD GSLTANGPFNF+A+ G V+ S LAVTGGTG+Y GA G V +SAGPAE+F SLQFDF +K
Sbjct:    4 FIVNASVAFALLLGFATVEASRGKHEGSVEFTVFERQSDDGPRHSPLFTLPVPEAEDVEYPSKMVLFNNDLYGSEDDLIDEVQDALLGYNQGHCVETVASGGFIAECFFTYVFDDGSLTANGPFNFDAEDG-VLPSFLAVTGGTGEYDGALGCVEVSAGPAEEFPSLQFDFKLK 176          
BLAST of mRNA_H-elongata_contig124056.1810.1 vs. uniprot
Match: D8LRY1_ECTSI (Potential Allene oxide cyclase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY1_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 2.760e-52
Identity = 83/114 (72.81%), Postives = 97/114 (85.09%), Query Frame = 0
Query:   58 MVLFNNDLYGSKDGLIEEDPDEIIGYNQGHCVETVATEGFFAECYFTYVFDGGSLTANGPFNFNADSGNVVSSVLAVTGGTGDYIGAKGEVTLSAGPAEDFASLQFDFDVKNSS 171
            MVLFNNDLYGS+D LI+ED +E+IGYNQGHCVETVA+ GF AEC+FTYVFD GSLTANGPFNF+ + G V+ S LAVTGGTG+Y GA+G V +SAGPAE+F SLQFDF +K  S
Sbjct:    1 MVLFNNDLYGSEDHLIDEDQEELIGYNQGHCVETVASGGFIAECFFTYVFDDGSLTANGPFNFDVEDG-VLPSFLAVTGGTGEYDGAQGCVEVSAGPAEEFPSLQFDFKLKRKS 113          
BLAST of mRNA_H-elongata_contig124056.1810.1 vs. uniprot
Match: A0A5J6MIQ6_9PROT (Allene-oxide cyclase n=2 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MIQ6_9PROT)

HSP 1 Score: 68.6 bits (166), Expect = 1.780e-11
Identity = 55/168 (32.74%), Postives = 85/168 (50.60%), Query Frame = 0
Query:    1 FAVIFAASTLLLLSSPTVDARKNSQFTIYERQSDDGPRHSPLFTLPVGGEEGEFPSKMVLFNNDLYGSKDGLIEEDPDEIIGYNQGHCVETVATEGFFAECYFTYVFDGGSLTANGPFNFNADSGNVVSSVLAVTGGTGDYIGAKGEVTLSAGPAEDFASLQFDFDVK 168
            FA+I  A+  L+ SS    A +    T  ER + D         +   G +G+    ++ F N++Y       +E   +++G++ G C+ TV   G   ECY+T   + G L+  GP+    D+G+   SVLAVTGGTG Y GA+GE+ L A  A+     ++DF  K
Sbjct:   11 FALIALAA--LIGSSRPASAFQTESATYVERATTDA--------VTDLGAKGDSVGDLLTFANEIY-------DEHNKKLVGHDNGWCIRTVV--GAAWECYWTLELEDGQLSVAGPY---LDAGD---SVLAVTGGTGRYYGARGEMKLHARNAQ---GSEYDFMYK 150          
BLAST of mRNA_H-elongata_contig124056.1810.1 vs. uniprot
Match: A0A536NCQ6_9CHLR (Allene oxide cyclase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536NCQ6_9CHLR)

HSP 1 Score: 67.8 bits (164), Expect = 3.720e-11
Identity = 53/176 (30.11%), Postives = 81/176 (46.02%), Query Frame = 0
Query:    1 FAVIFAASTLLLLSSPTVDARKNS----QFTIYERQSDDGPRHSPLFTLPVGGEEGEFPSKMVLFNNDLYGSKDGLIEEDPDEIIGYNQGHCVETVATEGFFAECYFTYVFDGGSLTANGPFNFNADSGNVVSSVLAVTGGTGDYIGAKGEVTLSAGPAEDFASLQFDFDVKNSSG 172
            F V+ A + L+++   TV A        + T+ ER   D        T+   G  G+    ++ F N +Y + +          +G +QG C+ T    G   EC +T +  GGSLT  GPFN N        + LA+TGGTG Y  A+G++TL A  A+     ++DF  +   G
Sbjct:    6 FGVLGAGALLVIVLGSTVVAADGPGGGHRLTVVERAETD--------TVVDLGATGDSIGDLLAFGNPIYDASN-------THQVGRDQGSCIRT--NPGVSWECTWTTIVPGGSLTVEGPFNDNGSD-----TQLAITGGTGTYRNARGQMTLHARNAQ---GSEYDFRFQTIGG 156          
BLAST of mRNA_H-elongata_contig124056.1810.1 vs. uniprot
Match: A0A5J6MYX8_9PROT (Allene-oxide cyclase n=2 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6MYX8_9PROT)

HSP 1 Score: 66.2 bits (160), Expect = 8.710e-11
Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = 0
Query:   49 GEEGEFPSKMVLFNNDLYGSKDGLIEEDPDEIIGYNQGHCVETVATEGFFAECYFTYVFDGGSLTANGPFNFNADSGNVVSSVLAVTGGTGDYIGAKGEVTLSAGPAEDFASLQFDFDVK 168
            G++G+    ++ F N++Y       +E    ++G++ G C+ TV  + +  EC++T     G L+  GP+   ADS      VL+VTGGTG Y GA+GE+ L A  A+     ++DF  K
Sbjct:   29 GDKGDSVGDLLTFANEIY-------DEHNKNLLGHDNGWCIRTVVGKAW--ECFWTLTLADGQLSVAGPYFDAADS------VLSVTGGTGRYYGARGEMKLHARNAQ---GTEYDFAYK 130          
BLAST of mRNA_H-elongata_contig124056.1810.1 vs. uniprot
Match: UPI000485D872 (dirigent protein n=1 Tax=Marmoricola sp. URHB0036 TaxID=1298863 RepID=UPI000485D872)

HSP 1 Score: 66.2 bits (160), Expect = 1.460e-10
Identity = 53/159 (33.33%), Postives = 75/159 (47.17%), Query Frame = 0
Query:   12 LLSSPTVDARKNSQFTIYERQSDDGPRHSPLFTLPVGGEEGEFPSKMVLFNNDLYGSKDGLIEEDPDEIIGYNQGHCVETVATEGFFAECYFTYVFDGGSLTANGPFNFNADSGNVVSSVLAVTGGTGDYIGAKGEVTLSAGPAEDFASLQFDFDVKNS 170
            + SSP  D  ++ +FT+ ER   D    +   T P G   G+    ++ F N ++ +K+          +G + G CV T     +  EC +T    GGSL  +GPF  + DS       LAVTGGTG Y GA GE+ L A  A   A   F F ++ S
Sbjct:   24 MASSP--DHHRHGRFTVVERALTD----TTADTGPAGDSLGD----VLAFANPIFNAKN-------THKVGTDNGSCVRTAVGSAY--ECTWTTSLPGGSLVVSGPFRDHGDS------TLAVTGGTGKYRGASGEMRLHARNAAGSA-YNFTFSLRRS 156          
BLAST of mRNA_H-elongata_contig124056.1810.1 vs. uniprot
Match: A0A370CZI8_9MYCO (Allene-oxide cyclase n=1 Tax=Mycolicibacterium moriokaense TaxID=39691 RepID=A0A370CZI8_9MYCO)

HSP 1 Score: 63.9 bits (154), Expect = 1.250e-9
Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 0
Query:   49 GEEGEFPSKMVLFNNDLYGSKDGLIEEDPDEIIGYNQGHCVETVATEGFFAECYFTYVFDGGSLTANGPFNFNADSGNVVSSVLAVTGGTGDYIGAKGEVTLSA 152
            G +G+    ++ F N+++ ++D          +G +QG CV TVA   +  EC++T     G +T  GPF    DSG+   SVLA+TGGTG Y  A+G++ LSA
Sbjct:   61 GAKGDSAGDILTFANEVFDAQDATR-------VGNDQGMCVRTVAGSAW--ECFWTLTLAAGQITVQGPFY---DSGD---SVLAITGGTGAYANAQGDMLLSA 149          
BLAST of mRNA_H-elongata_contig124056.1810.1 vs. uniprot
Match: A0A5C7NDL5_9PROT (Allene-oxide cyclase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NDL5_9PROT)

HSP 1 Score: 61.6 bits (148), Expect = 6.920e-9
Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 0
Query:   17 TVDARKNSQFTIYERQSDDGPRHSPLFTLPVGGEEGEFPSKMVLFNNDLYGSKDGLIEEDPDEIIGYNQGHCVETVATEGFFAECYFTYVFDGGSLTANGPFNFNADSGNVVSSVLAVTGGTGDYIGAKGEVTLSAGPAEDFASLQFDF 165
            T  A+  S   + ER + D         +   G +G+    ++ F N +Y + +       ++ IG + G C+ TV  + +  EC++T     G +T  GPF    D+G+   SVLAVTGGTG Y  A+G++TL A    D    ++DF
Sbjct:   22 TATAQAQSTIAVVERATTDA--------VTDLGAKGDSAGDLLTFANGIYDATN-------EKKIGADNGWCIRTVPGKAW--ECFWTISLPKGQITVEGPFY---DAGD---SVLAVTGGTGSYTQARGQMTLHA---RDDKGSEYDF 144          
BLAST of mRNA_H-elongata_contig124056.1810.1 vs. uniprot
Match: A0A085WNT7_9DELT (Allene-oxide cyclase n=1 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085WNT7_9DELT)

HSP 1 Score: 61.2 bits (147), Expect = 1.090e-8
Identity = 38/127 (29.92%), Postives = 63/127 (49.61%), Query Frame = 0
Query:   39 HSPLFTLPVGGEEGEFPSKMVLFNNDLYGSKDGLIEEDPDEIIGYNQGHCVETVATEGFFAECYFTYVFDGGSLTANGPFNFNADSGNVVSSVLAVTGGTGDYIGAKGEVTLSAGPAEDFASLQFDF 165
            H+    +      G+    ++ F N+LY       +E     +G NQG+CV  VA + +  EC +T   +GG ++  GPF       +V  S L++TGGTG++ GA+G++ L     +     +FDF
Sbjct:   39 HASTDAVTDNSPPGDSVGDVLTFANELY-------DETNTRKVGTNQGYCVRVVAGQAW--ECLWTAFLEGGQISVEGPFY------DVKGSTLSITGGTGNFNGARGQMQLEFRNPQ---GTEFDF 147          
BLAST of mRNA_H-elongata_contig124056.1810.1 vs. uniprot
Match: A0A102DG03_9SPHN (Allene-oxide cyclase n=1 Tax=Novosphingobium sp. FSW06-99 TaxID=1739113 RepID=A0A102DG03_9SPHN)

HSP 1 Score: 60.8 bits (146), Expect = 1.300e-8
Identity = 37/121 (30.58%), Postives = 60/121 (49.59%), Query Frame = 0
Query:   48 GGEEGEFPSKMVLFNNDLYGSKDGLIEEDPDEIIGYNQGHCVETVATEGFFAECYFTYVFDGGSLTANGPFNFNADSGNVVSSVLAVTGGTGDYIGAKGEVTLSAGPAEDFASLQFDFDVK 168
            GG   E    ++ F N +Y + +        + +G +QG+CV  +   G   EC++T +   G +  +GP    AD  N   + LAVTGGTG Y GA+G++ + A    D  +  +DF  +
Sbjct:   40 GGSAAENVGDVLTFTNPIYDASNS-------KKVGVDQGYCVRLIV--GKTMECHWTLILAKGQIMVDGPV---ADGDNAPDTTLAVTGGTGAYRGARGDMLIHA---RDAKATAYDFHYR 145          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124056.1810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6D7_9PHAE1.410e-7065.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRY1_ECTSI2.760e-5272.81Potential Allene oxide cyclase, partial n=1 Tax=Ec... [more]
A0A5J6MIQ6_9PROT1.780e-1132.74Allene-oxide cyclase n=2 Tax=Hypericibacter terrae... [more]
A0A536NCQ6_9CHLR3.720e-1130.11Allene oxide cyclase n=1 Tax=Chloroflexi bacterium... [more]
A0A5J6MYX8_9PROT8.710e-1133.33Allene-oxide cyclase n=2 Tax=Hypericibacter adhaer... [more]
UPI000485D8721.460e-1033.33dirigent protein n=1 Tax=Marmoricola sp. URHB0036 ... [more]
A0A370CZI8_9MYCO1.250e-937.50Allene-oxide cyclase n=1 Tax=Mycolicibacterium mor... [more]
A0A5C7NDL5_9PROT6.920e-930.87Allene-oxide cyclase n=1 Tax=Rhodospirillaceae bac... [more]
A0A085WNT7_9DELT1.090e-829.92Allene-oxide cyclase n=1 Tax=Hyalangium minutum Ta... [more]
A0A102DG03_9SPHN1.300e-830.58Allene-oxide cyclase n=1 Tax=Novosphingobium sp. F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034871Allene oxide cyclase superfamilyGENE3D2.40.480.10coord: 12..164
e-value: 2.0E-12
score: 48.8
IPR034871Allene oxide cyclase superfamilySUPERFAMILY141493Allene oxide cyclase-likecoord: 29..151
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..174
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.757

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig124056contigH-elongata_contig124056:333..1934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig124056.1810.1mRNA_H-elongata_contig124056.1810.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig124056 333..1934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig124056.1810.1 ID=prot_H-elongata_contig124056.1810.1|Name=mRNA_H-elongata_contig124056.1810.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
FAVIFAASTLLLLSSPTVDARKNSQFTIYERQSDDGPRHSPLFTLPVGGE
EGEFPSKMVLFNNDLYGSKDGLIEEDPDEIIGYNQGHCVETVATEGFFAE
CYFTYVFDGGSLTANGPFNFNADSGNVVSSVLAVTGGTGDYIGAKGEVTL
SAGPAEDFASLQFDFDVKNSSGKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034871Allene_oxi_cyc_sf