prot_H-elongata_contig123820.1793.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig123820.1793.1
Unique Name	prot_H-elongata_contig123820.1793.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	130

Homology

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BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot
Match: A0A6H5KJH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH4_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 1.180e-54
Identity = 97/131 (74.05%), Postives = 112/131 (85.50%), Query Frame = 0

Query:    1 MSLERLSLRRNSFSSPEAVDMFLSPPP-APAGSLPLSRSIRDLDLSSNGLSVVPRSVFSCRGLQTLGLGFNTLSDLSGLPWATLAALENLDLSSNRLRDLGDVILMTWLRRLNLENNEINPVPLELGLCTG 130
            M++ RLSLRRNS SS  AV+ FL+PP  AP GSLPLS SIR+LDLSSN L  VP ++F+CRGLQTL L +N LSD+SGLPWA L +LENLDLS+NRLR LGDV+LMTWLRRLNLENN+I+PVPLELGLCTG
Sbjct:  379 MAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLENLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTG 509

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BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot
Match: D8LFI7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI7_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 5.230e-45
Identity = 83/110 (75.45%), Postives = 95/110 (86.36%), Query Frame = 0

Query:   22 FLSPPP-APAGSLPLSRSIRDLDLSSNGLSVVPRSVFSCRGLQTLGLGFNTLSDLSGLPWATLAALENLDLSSNRLRDLGDVILMTWLRRLNLENNEINPVPLELGLCTG 130
            FL+PP  AP GSLPLS SIR+LDLSSN L  VP ++F+CRGLQTL L +N LSD+SGLPWA L +LE LDLS+NRLR LGDV+LMTWLRRLNLENN+I+PVPLELGLCTG
Sbjct:  486 FLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRCLGDVVLMTWLRRLNLENNDISPVPLELGLCTG 595

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BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot
Match: T0QQ18_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QQ18_SAPDV)

HSP 1 Score: 80.9 bits (198), Expect = 3.290e-15
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 0

Query:   30 AGSLPLSRSIRDLDLSSNGLSVVPRSVFSCRGLQTLGLGFNTLSDLSGLPWATLAALENLDLSSNRLRDLGDVILMTWLRRLNLENNEINPVPLELGLC 128
            AG+      +++LD+ +N LS++P ++     L TL L FN LS L+G+PW  + AL  +  S N+L DLG +     L  L++ENN +  +P ELGLC
Sbjct:  488 AGAFHARMKLKELDVRNNALSMLPANLHQLSSLNTLLLSFNRLSTLAGMPWRLMKALSIVSASDNKLTDLGTIFEAPTLSSLSVENNSLQAIPAELGLC 586

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BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot
Match: A0A0N7L4J0_PLAHL (Leucine-rich repeat protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4J0_PLAHL)

HSP 1 Score: 80.9 bits (198), Expect = 3.310e-15
Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 0

Query:    3 LERLSLRRNSFSSPEAVDMFLSPPPAPAGSLPLSRSIRDLDLSSNGLSVVPRSVFSCRGLQTLGLGFNTLSDLSGLPWATLAALENLDLSSNRLRDLGDVILMTWLRRLNLENNEINPVPLELGLC 128
            LE L LR+N + + +A+  FL        S  L  +++++DL SN LS++P      R L+ L L  N +  L   PW+ L  +  +DLS N+LR LG +     L+ L+ ENN I  VP+ELGLC
Sbjct:  478 LEVLRLRKN-YLTADAIADFLR------NSTTLGTTLKEIDLRSNKLSIIPVETGQLRSLENLLLSHNQIEALDQFPWSHLTKVSVIDLSDNKLRSLGRIYDAPLLQSLSFENNNITKVPVELGLC 596

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BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot
Match: A0A8J2X490_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X490_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 4.570e-15
Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 0

Query:   35 LSRSIRDLDLSSNGLSVVPRSVFSCRGLQTLGLGFNTLSDLSGLPWATLAALENLDLSSNRLRDLGDVILMTWLRRLNLENNEINPVPLELGLC 128
            L+R++ +LD+S N L  +PRS+F  + L+++ L  N LS   G  WA+L ALE L+L+ NRL  LGDV     LR L+L NN +  VP ELGLC
Sbjct:  506 LARNLSELDMSGNRLIRIPRSLFGLQALRSVTLARNELSGDLGRGWASLLALETLNLADNRLGALGDVHKAPVLRTLDLGNNCLRSVPPELGLC 599

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BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot
Match: A0A1W0A3H6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3H6_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 6.120e-15
Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 0

Query:    2 SLERLSLRRNSFSSPEAVDMFLSPPPAPAGSLPLSRSIRDLDLSSNGLSVVPRSVFSCRGLQTLGLGFNTLSDLSGLPWATLAALENLDLSSNRLRDLGDVILMTWLRRLNLENNEINPVPLELGLCT 129
            SL  + LR+NS +     D F S              +++LDL +N L  +P++++  + L TL L +N +S L  +PW  L+AL  + +S N+L  LG +     L  L++ENN +  +P ELGLC+
Sbjct:  462 SLIHVRLRKNSLTEAAFGDNFTS-----------RMKLKELDLRNNALCALPQNIYRLKALYTLLLSYNRISTLDNVPWIALSALSIVSISDNKLTSLGTIYEAPVLSSLSVENNNLQQIPAELGLCS 578

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BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot
Match: A0A1V9ZKS6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKS6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.630e-12
Identity = 42/126 (33.33%), Postives = 66/126 (52.38%), Query Frame = 0

Query:    3 LERLSLRRNSFSSPEAVDMFLSPPPAPAGSLPLSRSIRDLDLSSNGLSVVPRSVFSCRGLQTLGLGFNTLSDLSGLPWATLAALENLDLSSNRLRDLGDVILMTWLRRLNLENNEINPVPLELGLC 128
            L  L LR+NS +     D F                +++LDL +N LS +P ++     L TL L FN L+ L+ + W+ +AAL  + ++ N+L D+G +     L  L++ENN +  +P ELGLC
Sbjct:  486 LINLRLRKNSLTERAFDDAFHG-----------RMKLKELDLRNNALSALPANLHQLSSLNTLLLSFNRLASLASVLWSKMAALSIVSIADNKLVDIGTIYEAPQLSSLSVENNNLQQIPPELGLC 600

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BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot
Match: W4GDP1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GDP1_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 5.840e-10
Identity = 33/93 (35.48%), Postives = 56/93 (60.22%), Query Frame = 0

Query:   34 PLSRSIRDLDLSSNGLSVVPRSVFSCRGLQTLGLGFNTLSDLSGLPWATLAALENLDLSSNRLRDLGDVILMTWLRRLNLENNEINPVPLELG 126
            P+  ++ +LD+ +N L+ VP  + + + L TL + FN ++ L G+ WA +  L +   S+NRL  LG + +   L  LN+ENN +  +P+ELG
Sbjct:  454 PIRYTLVELDVRNNNLTKVPPGLSAFQLLDTLLVSFNQITALDGVHWANMTKLTSCLASNNRLESLGTIYVAPSLTSLNVENNALRHIPIELG 546

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BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot
Match: A0A0G2EFT8_9EURO (Putative leucine rich repeat domain-containing protein n=1 Tax=Phaeomoniella chlamydospora TaxID=158046 RepID=A0A0G2EFT8_9EURO)

HSP 1 Score: 55.8 bits (133), Expect = 1.870e-6
Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 0

Query:   33 LPLSRSIRDLDLSSNGLSVVPRSVFSCRGLQTLGLGFNTLSDLSGLPWATLAALENLDLSSNRLRDLGDVILMTWLRRLNLENNEINPVPLELGLCTG 130
            LP+S ++R LDLSSN  + +P S+     L++L L    +  L  L  + L A+  L L SNRLR L  +  +  L RL+L +N+I   P E    TG
Sbjct:  429 LPVSATLRSLDLSSNLFAEIPESLACLTALRSLDLSNCMIESLHSLSRSPLPAVTVLKLRSNRLRSLAGIERLLSLERLDLSDNKITD-PEEAARLTG 525

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BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot
Match: A0A815ABE2_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815ABE2_9BILA)

HSP 1 Score: 53.5 bits (127), Expect = 1.090e-5
Identity = 30/89 (33.71%), Postives = 48/89 (53.93%), Query Frame = 0

Query:   37 RSIRDLDLSSNGLSVVPRSVFSCRGLQTLGLGFNTLSDLSGLPWATLAALENLDLSSNRLRDLGDVILMTWLRRLNLENNEINPVPLEL 125
            +++  L L    L  +P  +F  R L+ L +  N L D+     A L  LE L LS+N +++L D+  +  L +L+L NN I  +PLE+
Sbjct:  235 KNLTSLSLDRCRLKQMPAEIFQLRALKILSIQQNQLRDVPFASLANLTHLETLHLSNNEIQNLTDIGKLKSLTKLDLSNNSIVEIPLEI 323

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot

BLAST of mRNA_H-elongata_contig123820.1793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
A0A6H5KJH4_9PHAE	1.180e-54	74.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LFI7_ECTSI	5.230e-45	75.45	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
T0QQ18_SAPDV	3.290e-15	39.39	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
A0A0N7L4J0_PLAHL	3.310e-15	38.10	Leucine-rich repeat protein n=1 Tax=Plasmopara hal...	[more]
A0A8J2X490_9STRA	4.570e-15	47.87	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A1W0A3H6_9STRA	6.120e-15	33.59	Uncharacterized protein n=1 Tax=Thraustotheca clav...	[more]
A0A1V9ZKS6_9STRA	1.630e-12	33.33	Uncharacterized protein n=1 Tax=Achlya hypogyna Ta...	[more]
W4GDP1_9STRA	5.840e-10	35.48	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A0G2EFT8_9EURO	1.870e-6	37.76	Putative leucine rich repeat domain-containing pro...	[more]
A0A815ABE2_9BILA	1.090e-5	33.71	Hypothetical protein n=1 Tax=Didymodactylos carnos...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00019	LEURICHRPT	coord: 39..52 score: 42.97 coord: 83..96 score: 54.76
None	No IPR available	PANTHER	PTHR15454:SF7	SD03973P	coord: 3..116
None	No IPR available	PANTHER	PTHR15454	NISCHARIN RELATED	coord: 3..116
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 2..125
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 37..59 e-value: 18.0 score: 11.2 coord: 105..128 e-value: 39.0 score: 8.4 coord: 83..104 e-value: 43.0 score: 8.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 1..130 e-value: 1.3E-18 score: 68.6
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 38..96 e-value: 3.5E-10 score: 39.5
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 61..82 score: 6.634
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 107..128 score: 6.395
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 85..106 score: 8.097
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 2..23 score: 5.202
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 38..59 score: 6.172

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig123820	contig	H-elongata_contig123820:78..869 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig123820.1793.1	mRNA_H-elongata_contig123820.1793.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig123820 78..869 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig123820.1793.1 ID=prot_H-elongata_contig123820.1793.1|Name=mRNA_H-elongata_contig123820.1793.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=130bp
MSLERLSLRRNSFSSPEAVDMFLSPPPAPAGSLPLSRSIRDLDLSSNGLS
VVPRSVFSCRGLQTLGLGFNTLSDLSGLPWATLAALENLDLSSNRLRDLG
DVILMTWLRRLNLENNEINPVPLELGLCTG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt