prot_H-elongata_contig123636.1783.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig123636.1783.1
Unique Nameprot_H-elongata_contig123636.1783.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length274
Homology
BLAST of mRNA_H-elongata_contig123636.1783.1 vs. uniprot
Match: D7FLP3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP3_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 9.160e-86
Identity = 174/271 (64.21%), Postives = 194/271 (71.59%), Query Frame = 0
Query:    1 EVFRAVGRQYRHVLVDEWQDTNGPQYQLVLELVRAGVEAQAALEEIERAADAAILASGQGNIAREGERKGKGDEAPR---TSRRKSSSSKPRSTAK----GYADPDADSGFGP-PAP-SVFVVGDSDQCIYRFRGADHTNVARFAEDFAGCRTVFLRENYRSTGNIARAATAVIEKVRQRIKQETVA---IQSDGRPIGVMRCSDDVGEAKAVARQVELYLTSGRVPAGEMAVMYRTNAQSRSFEEAFVRRALPFVVVGAQRFYERREVDD 259
            EVFR+VGRQYRH+LVDEWQDTNGPQY +VLE+VRAG EAQ A E+  RAA AA     +G I R GE  G    +P     S   +S      TA     G +   A  G  P PAP S+FVVGD+DQCIY+FRGAD+TNVARF EDF  CRTV LRENYRST NIARAATAVI +V  R  Q T+A   +Q DG PIGVM CSD  GEA+AVA  +ELY TSGRV   EMAVMYRTNAQSRSFEEA +R+ALPFVVVGAQRFYERREV D
Sbjct:  303 EVFRSVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREAQQAREDNRRAAQAAREGGSRG-IERGGEAGGPAYSSPAGLGDSGSPASGGAEAETASAKVVGVSGEGAAGGTRPQPAPPSIFVVGDTDQCIYKFRGADYTNVARFVEDFKACRTVMLRENYRSTANIARAATAVIGQVSGRAGQSTIATTAVQGDGLPIGVMVCSDAAGEAEAVAHHLELYWTSGRVQPSEMAVMYRTNAQSRSFEEACLRKALPFVVVGAQRFYERREVKD 572          
BLAST of mRNA_H-elongata_contig123636.1783.1 vs. uniprot
Match: A0A199NUU3_9MICC (DNA helicase n=11 Tax=Actinomycetia TaxID=1760 RepID=A0A199NUU3_9MICC)

HSP 1 Score: 148 bits (374), Expect = 8.760e-37
Identity = 101/259 (39.00%), Postives = 131/259 (50.58%), Query Frame = 0
Query:    1 EVFRAVGRQYRHVLVDEWQDTNGPQYQLVLELVRAGVEAQAALEEIERAADAAILASGQGNIAREGERKGKGDEAPRTSRRKSSSSKPRSTAKGYADPDADSGFGPPAPSVFVVGDSDQCIYRFRGADHTNVARFAEDFAGCRTVFLRENYRSTGNIARAATAVIEKVRQRIKQETVAIQSDGRPIGVMRCSDDVGEAKAVARQVELYLTSGRVPAGEMAVMYRTNAQSRSFEEAFVRRALPFVVVGAQRFYERREVDD 259
            +V     R+YRH+LVDE+QDTN  QY LV ELV A               DAA  + G  N A  G+                  + P   A G A+             + VVGDSDQ IY FRGAD  N+  F  D+   RT+ L +NYRST  I  AA AVIE+  QR  ++      DG PI      ++  EA+ +A +++       + AG++AV YRTNAQSRS EE  +R  LP+ VVG  RFYER+E+ D
Sbjct:  232 QVAEFYRRRYRHILVDEYQDTNHAQYALVRELVGA---------------DAAASSGGSSNGAVAGK------------------ASPYPEAAGPAE-------------LTVVGDSDQSIYAFRGADIRNITDFERDYPNARTILLEQNYRSTQTILSAANAVIERNPQRRPKKLWTASGDGEPIVGYVAENEHAEARFIAEEIDRLRDEECIAAGDVAVFYRTNAQSRSLEEILMRVGLPYRVVGGTRFYERKEIKD 444          
BLAST of mRNA_H-elongata_contig123636.1783.1 vs. uniprot
Match: A0A7W1V1U4_9ACTN (ATP-dependent DNA helicase n=1 Tax=Propionibacteriales bacterium TaxID=2015801 RepID=A0A7W1V1U4_9ACTN)

HSP 1 Score: 147 bits (371), Expect = 2.010e-36
Identity = 102/259 (39.38%), Postives = 127/259 (49.03%), Query Frame = 0
Query:    1 EVFRAVGRQYRHVLVDEWQDTNGPQYQLVLELVRAGVEAQAALEEIERAADAAILASGQGNIAREGERKGKGDEAPRTSRRKSSSSKPRSTAKGYADPDADSGFGPPAPSVFVVGDSDQCIYRFRGADHTNVARFAEDFAGCRTVFLRENYRSTGNIARAATAVIEKVRQRIKQETVAIQSDGRPIGVMRCSDDVGEAKAVARQVELYLTSGRVPAGEMAVMYRTNAQSRSFEEAFVRRALPFVVVGAQRFYERREVDD 259
            EV     R++RHVLVDE+QDTN  QY LV EL  AG           R AD  ++                                      G  +P A S    PA  + VVGDSDQ IY FRGA+  N+ +F EDF G  TV L +NYRST NI  AA AVI    +R  +   +   DG  I      D+  EA+ VA +++    +      ++A+ YRTNAQSR FEE F+R  LP+ VVG  RFYERREV D
Sbjct:  231 EVRETYRRRFRHVLVDEYQDTNHAQYVLVRELCAAGAG--------RRTADGDVV--------------------------------------GSTEPAAASHAAEPA-ELLVVGDSDQSIYAFRGANIRNILQFEEDFPGASTVVLEQNYRSTQNILNAANAVISNNPKRRPKNLWSEAGDGELIAGYVADDEHDEAQFVAEEIDRLTDASEAKPADVAIFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERREVRD 442          
BLAST of mRNA_H-elongata_contig123636.1783.1 vs. uniprot
Match: A0A6G7XLL3_9ACTN (ATP-dependent DNA helicase n=1 Tax=Nocardioides sp. HDW12B TaxID=2714939 RepID=A0A6G7XLL3_9ACTN)

HSP 1 Score: 145 bits (366), Expect = 9.930e-36
Identity = 99/259 (38.22%), Postives = 128/259 (49.42%), Query Frame = 0
Query:    1 EVFRAVGRQYRHVLVDEWQDTNGPQYQLVLELVRAGVEAQAALEEIERAADAAILASGQGNIAREGERKGKGDEAPRTSRRKSSSSKPRSTAKGYADPDADSGFGPPAPSVFVVGDSDQCIYRFRGADHTNVARFAEDFAGCRTVFLRENYRSTGNIARAATAVIEKVRQRIKQETVAIQSDGRPIGVMRCSDDVGEAKAVARQVELYLTSGRVPAGEMAVMYRTNAQSRSFEEAFVRRALPFVVVGAQRFYERREVDD 259
            EV     R++RHVLVDE+QDTN  QY LV EL    V   AAL   +     A  A G+G +                                          GP    + VVGD+DQ IY FRGA+  N+  F EDFA  RT+ L +NYRST  +  AA AVI + + R  +   +    G PI      D+  EA+ +AR+++     GR    ++AV YRTNAQSR FEE F+R  +P+ VVG  RFYER+EV D
Sbjct:  255 EVRETYRRRFRHVLVDEYQDTNHAQYALVRELCGTSVRRPAALGGDDPDLPDADEAEGEGGV------------------------------------------GP--AELMVVGDADQSIYAFRGANIRNIMAFEEDFADARTILLEQNYRSTQTVLDAANAVIGRNKGRKPKRLWSDTGTGDPIVGYVADDEHDEARFIAREIDTLGDEGRAKPKDVAVFYRTNAQSRVFEEVFIRVGMPYKVVGGVRFYERKEVRD 469          
BLAST of mRNA_H-elongata_contig123636.1783.1 vs. uniprot
Match: A0A7X7XJR7_9ACTN (DNA helicase n=1 Tax=Propionibacterium sp. TaxID=1977903 RepID=A0A7X7XJR7_9ACTN)

HSP 1 Score: 144 bits (364), Expect = 1.860e-35
Identity = 99/259 (38.22%), Postives = 124/259 (47.88%), Query Frame = 0
Query:    1 EVFRAVGRQYRHVLVDEWQDTNGPQYQLVLELVRAGVEAQAALEEIERAADAAILASGQGNIAREGERKGKGDEAPRTSRRKSSSSKPRSTAKGYADPDADSGFGPPAPSVFVVGDSDQCIYRFRGADHTNVARFAEDFAGCRTVFLRENYRSTGNIARAATAVIEKVRQRIKQETVAIQSDGRPIGVMRCSDDVGEAKAVARQVELYLTSGRVPAGEMAVMYRTNAQSRSFEEAFVRRALPFVVVGAQRFYERREVDD 259
            +V     R++RHVLVDE+QDTN  QY LV EL                                     G G +AP                   A+P          P + VVGDSDQ IY FRGAD  N+  F  DF G RT+ L +NYRST  I  AA AVI +   R ++   +   DG PI       +  EA+ VA +++    +G    G++AV YRTNAQSR+FEE F+R  LP+ VVG  RFYERREV D
Sbjct:  264 DVRERYRRRFRHVLVDEYQDTNHAQYALVRELC------------------------------------GPGSDAP---------------GAPVAEP----------PELMVVGDSDQSIYAFRGADIRNILDFESDFPGARTILLEQNYRSTQTILSAANAVITRNANRPEKRLWSDAGDGEPIVGYVADTEHAEAQFVATEIDRLTDAGTARPGDVAVFYRTNAQSRAFEEVFIRVGLPYRVVGGVRFYERREVRD 461          
BLAST of mRNA_H-elongata_contig123636.1783.1 vs. uniprot
Match: UPI001FCBECA1 (DNA helicase PcrA n=2 Tax=Kineococcus TaxID=33981 RepID=UPI001FCBECA1)

HSP 1 Score: 143 bits (361), Expect = 4.330e-35
Identity = 98/259 (37.84%), Postives = 125/259 (48.26%), Query Frame = 0
Query:    1 EVFRAVGRQYRHVLVDEWQDTNGPQYQLVLELVRAGVEAQAALEEIERAADAAILASGQGNIAREGERKGKGDEAPRTSRRKSSSSKPRSTAKGYADPDADSGFGPPAPSVFVVGDSDQCIYRFRGADHTNVARFAEDFAGCRTVFLRENYRSTGNIARAATAVIEKVRQRIKQETVAIQSDGRPIGVMRCSDDVGEAKAVARQVELYLTSGRVPAGEMAVMYRTNAQSRSFEEAFVRRALPFVVVGAQRFYERREVDD 259
            +V     R++RHVLVDE+QDTN  QY LV ELV   V  +AA            L +  G++ REG R                                      P   + VVGD+DQ IY FRGA   N+A F +D+   RTV L +NYRST  I  AA  VI+    R  +        G  I      D+  EA  VA +V+    +G++   ++AV YRTNAQSR+ EE FVR  LP+ +VG  RFYERREV D
Sbjct:  234 DVAEHYRRRFRHVLVDEYQDTNHAQYVLVRELVGGSVSEEAARSG---------LTAADGSVVREGSR-----------------------------------IAVPPAELTVVGDADQSIYAFRGATIRNIAEFEKDYPDARTVLLEQNYRSTQTILSAANEVIKHNEDRRAKNLWTAAGAGEQIVGYVADDEHDEAAFVAEEVDRLHDAGQLKYSDVAVFYRTNAQSRALEEVFVRTGLPYKIVGGTRFYERREVKD 448          
BLAST of mRNA_H-elongata_contig123636.1783.1 vs. uniprot
Match: A0A497AZB6_9CHLR (DNA helicase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497AZB6_9CHLR)

HSP 1 Score: 142 bits (359), Expect = 6.460e-35
Identity = 73/150 (48.67%), Postives = 97/150 (64.67%), Query Frame = 0
Query:  110 SVFVVGDSDQCIYRFRGADHTNVARFAEDFAGCRTVFLRENYRSTGNIARAATAVIEKVRQRIKQETVAIQSDGRPIGVMRCSDDVGEAKAVARQVELYLTSGRVPAGEMAVMYRTNAQSRSFEEAFVRRALPFVVVGAQRFYERREVDD 259
            ++FVVGD DQ IYRFRGAD  NV RF EDF   R + L +NYRST  I  AA ++I +   R  ++    +  G PI V    D+V E++ V  +++  +  G    G+ AVMYRTNAQSR+ EEAF+RR +P+ +VGA RFYERRE+ D
Sbjct:  238 NIFVVGDEDQSIYRFRGADWRNVLRFKEDFPEARVILLEKNYRSTQTILDAAQSIISRNPHRTPKKLYTDKGQGLPIIVFEAYDEVEESEFVVGEIQRLIARGLYSPGDFAVMYRTNAQSRTLEEAFLRRGMPYQLVGATRFYERREIKD 387          
BLAST of mRNA_H-elongata_contig123636.1783.1 vs. uniprot
Match: A0A7V9QZ44_9ACTN (ATP-dependent DNA helicase n=2 Tax=Nocardioidaceae bacterium TaxID=1871072 RepID=A0A7V9QZ44_9ACTN)

HSP 1 Score: 142 bits (358), Expect = 1.140e-34
Identity = 101/259 (39.00%), Postives = 131/259 (50.58%), Query Frame = 0
Query:    1 EVFRAVGRQYRHVLVDEWQDTNGPQYQLVLELVRAGVEAQAALEEIERAADAAILASGQGNIAREGERKGKGDEAPRTSRRKSSSSKPRSTAKGYADPDADSGFGPPAPSVFVVGDSDQCIYRFRGADHTNVARFAEDFAGCRTVFLRENYRSTGNIARAATAVIEKVRQRIKQETVAIQSDGRPIGVMRCSDDVGEAKAVARQVELYLTSGRVPAGEMAVMYRTNAQSRSFEEAFVRRALPFVVVGAQRFYERREVDD 259
            EV     R++RHVLVDE+QDTN  QY L+ EL                 +D +   +  G++   G                     P ST+     P A+     PA  + VVGDSDQ IY FRGA+  N+ +F +DFAG  TV L +NYRST NI  AA AVI    +R  +   +   DG  I      D+  EA+ VA +++     G     ++AV YRTNAQSR FEE F+R  LP+ VVG  RFYERRE+ D
Sbjct:  237 EVRETYRRRFRHVLVDEYQDTNHAQYALIRELC----------------SDTSARRTSDGDLVGVG---------------------PTSTSARPETPAAE-----PA-ELMVVGDSDQSIYAFRGANIRNILQFEQDFAGASTVVLDQNYRSTQNILSAANAVIANNPKRRPKNLWSEAGDGELICGYVADDEHDEAQFVAEEIDRLTDDGIAKPSDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERREIRD 452          
BLAST of mRNA_H-elongata_contig123636.1783.1 vs. uniprot
Match: A0A2W5D0Q3_9ACTN (DNA helicase (Fragment) n=1 Tax=Cutibacterium granulosum TaxID=33011 RepID=A0A2W5D0Q3_9ACTN)

HSP 1 Score: 139 bits (349), Expect = 1.150e-34
Identity = 98/259 (37.84%), Postives = 124/259 (47.88%), Query Frame = 0
Query:    1 EVFRAVGRQYRHVLVDEWQDTNGPQYQLVLELVRAGVEAQAALEEIERAADAAILASGQGNIAREGERKGKGDEAPRTSRRKSSSSKPRSTAKGYADPDADSGFGPPAPSVFVVGDSDQCIYRFRGADHTNVARFAEDFAGCRTVFLRENYRSTGNIARAATAVIEKVRQRIKQETVAIQSDGRPIGVMRCSDDVGEAKAVARQVELYLTSGRVPAGEMAVMYRTNAQSRSFEEAFVRRALPFVVVGAQRFYERREVDD 259
            EV     R++RHVLVDE+QDTN  QYQ++  L                 AD    ASG    AR                        R  A                P + VVGDSDQ IY FRGA   N+  F +DF G RT+ L +NYRST NI  AA ++I+K   R  +     Q DG  I       +  EA  +A +++  +  GR   GE+AV YRTNAQSR+ E+ F+R  LP+ VVG  RFYER+EV D
Sbjct:  220 EVREHYRRRFRHVLVDEYQDTNTAQYQMIRALC----------------ADEPEHASGSEEDAR------------------------RHVAP---------------PELMVVGDSDQSIYAFRGATIRNILDFEKDFPGARTILLEQNYRSTQNILAAANSLIQKNTGRPAKNLWTDQGDGAAITGYVADTEHDEASWIAGRIDDLVDQGRTSYGEVAVFYRTNAQSRALEDVFIRTGLPYRVVGGVRFYERKEVRD 423          
BLAST of mRNA_H-elongata_contig123636.1783.1 vs. uniprot
Match: A0A2G6HBA0_9ACTO (ATP-dependent DNA helicase n=1 Tax=Actinomycetales bacterium TaxID=1911520 RepID=A0A2G6HBA0_9ACTO)

HSP 1 Score: 142 bits (358), Expect = 1.170e-34
Identity = 103/259 (39.77%), Postives = 130/259 (50.19%), Query Frame = 0
Query:    1 EVFRAVGRQYRHVLVDEWQDTNGPQYQLVLELVRAGVEAQAALEEIERAADAAILASGQGNIAREGERKGKGDEAPRTSRRKSSSSKPRSTAKGYADPDADSGFGPPAPSVFVVGDSDQCIYRFRGADHTNVARFAEDFAGCRTVFLRENYRSTGNIARAATAVIEKVRQRIKQETVAIQSDGRPIGVMRCSDDVGEAKAVARQVELYLTSGRVPAGEMAVMYRTNAQSRSFEEAFVRRALPFVVVGAQRFYERREVDD 259
            EV     R++RHVLVDE+QDTN  QY LV ELV    +A         AAD   +A+    +ARE                            G A P A     PPA  V VVGD+DQ IY FRGA   N+  F +D+    T+ L +NYRST  I RAA AVI     R  +   + Q DG PI      ++  EA  V R+++       V   ++AV YRTNAQSR+ EE FVR  +P+ VVG  RFYER+E+ D
Sbjct:  253 EVAEHYRRRFRHVLVDEYQDTNHAQYCLVRELVGVSDDA---------AADPRAMANASDLVARE-------------------------HPAGAAGPAA----YPPAELV-VVGDADQSIYAFRGASIRNIVEFEQDYPHASTILLEQNYRSTQTILRAANAVIAHNPDRRPKNLWSDQGDGAPIVGYVADNEHDEASFVGRRIDTLADDHGVRPQDIAVFYRTNAQSRALEEVFVRVGIPYKVVGGTRFYERKEIKD 472          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123636.1783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLP3_ECTSI9.160e-8664.21DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A199NUU3_9MICC8.760e-3739.00DNA helicase n=11 Tax=Actinomycetia TaxID=1760 Rep... [more]
A0A7W1V1U4_9ACTN2.010e-3639.38ATP-dependent DNA helicase n=1 Tax=Propionibacteri... [more]
A0A6G7XLL3_9ACTN9.930e-3638.22ATP-dependent DNA helicase n=1 Tax=Nocardioides sp... [more]
A0A7X7XJR7_9ACTN1.860e-3538.22DNA helicase n=1 Tax=Propionibacterium sp. TaxID=1... [more]
UPI001FCBECA14.330e-3537.84DNA helicase PcrA n=2 Tax=Kineococcus TaxID=33981 ... [more]
A0A497AZB6_9CHLR6.460e-3548.67DNA helicase n=1 Tax=Chloroflexi bacterium TaxID=2... [more]
A0A7V9QZ44_9ACTN1.140e-3439.00ATP-dependent DNA helicase n=2 Tax=Nocardioidaceae... [more]
A0A2W5D0Q3_9ACTN1.150e-3437.84DNA helicase (Fragment) n=1 Tax=Cutibacterium gran... [more]
A0A2G6HBA0_9ACTO1.170e-3439.77ATP-dependent DNA helicase n=1 Tax=Actinomycetales... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014017UvrD-like DNA helicase, C-terminalPFAMPF13361UvrD_Ccoord: 146..260
e-value: 4.3E-17
score: 62.5
IPR014017UvrD-like DNA helicase, C-terminalPROSITEPS51217UVRD_HELICASE_CTERcoord: 155..273
score: 10.09
IPR034739UvrD/AddA helicase, N-terminalPFAMPF00580UvrD-helicasecoord: 2..35
e-value: 5.8E-6
score: 26.1
coord: 110..139
e-value: 4.0E-7
score: 29.9
NoneNo IPR availableGENE3D3.40.50.300coord: 149..250
e-value: 1.1E-29
score: 105.9
NoneNo IPR availableGENE3D1.10.486.10coord: 251..260
e-value: 1.1E-29
score: 105.9
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 2..259
IPR014016UvrD-like helicase, ATP-binding domainPROSITEPS51198UVRD_HELICASE_ATP_BINDcoord: 1..154
score: 16.721
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig123636contigH-elongata_contig123636:527..1771 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig123636.1783.1mRNA_H-elongata_contig123636.1783.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig123636 527..1771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig123636.1783.1 ID=prot_H-elongata_contig123636.1783.1|Name=mRNA_H-elongata_contig123636.1783.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bp
EVFRAVGRQYRHVLVDEWQDTNGPQYQLVLELVRAGVEAQAALEEIERAA
DAAILASGQGNIAREGERKGKGDEAPRTSRRKSSSSKPRSTAKGYADPDA
DSGFGPPAPSVFVVGDSDQCIYRFRGADHTNVARFAEDFAGCRTVFLREN
YRSTGNIARAATAVIEKVRQRIKQETVAIQSDGRPIGVMRCSDDVGEAKA
VARQVELYLTSGRVPAGEMAVMYRTNAQSRSFEEAFVRRALPFVVVGAQR
FYERREVDDFGFIVRQRGADLSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014017DNA_helicase_UvrD-like_C
IPR034739UvrD/AddA_N
IPR000212DNA_helicase_UvrD/REP
IPR014016UvrD-like_ATP-bd
IPR027417P-loop_NTPase